DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and CG6749

DIOPT Version :9

Sequence 1:NP_001163434.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster


Alignment Length:256 Identity:71/256 - (27%)
Similarity:111/256 - (43%) Gaps:45/256 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NRLMPQSSSTSTTTTFRPI-----FNIPRRSNHVLEPSCPRNCLCLEDFKFVQCANAHLTHVPLD 119
            |||     |:....||:|:     .|:.:.:...|.|:.         |..||....||..    
  Fly   228 NRL-----SSIGLETFQPLAQLRKLNLSQNALDALRPNV---------FGAVQNFVLHLQQ---- 274

  Fly   120 MPKTAAIIDLSHNVIAELRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTK 184
                   :|||.|.|..|....|..|:|...::::.|.|:|:....|.|...|::|.|..|.:.:
  Fly   275 -------LDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILE 332

  Fly   185 IDPDTFAAAKELTLLDLSNNTI----TQRLDGSFLNQPDLVEFSCVNCSWTELPEQTFQNMSGLE 245
            |.|.||||...|..||||.|.:    .|...|:.|  |.:...:........|....|.::..||
  Fly   333 IKPATFAALLNLDTLDLSYNNLEFLEEQIFGGNTL--PRMRRLNLNGNRMKHLHPLAFSSLPFLE 395

  Fly   246 VLRLNKNDFKQQINTKAFSPLTKIIKLKLPE--LEQQNIEELCSL------LTSIDTISFL 298
            .|:|..|:.| .::.:.|:|:.::.||.|..  ||:.|::.|.||      |...:.::||
  Fly   396 YLKLGHNELK-SLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFL 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_001163434.1 LRR_8 126..182 CDD:290566 18/55 (33%)
leucine-rich repeat 128..147 CDD:275380 8/18 (44%)
leucine-rich repeat 148..171 CDD:275380 5/22 (23%)
LRR_RI <150..225 CDD:238064 25/78 (32%)
LRR_8 171..254 CDD:290566 27/86 (31%)
leucine-rich repeat 172..195 CDD:275380 10/22 (45%)
leucine-rich repeat 196..219 CDD:275380 9/26 (35%)
leucine-rich repeat 220..243 CDD:275380 2/22 (9%)
leucine-rich repeat 244..268 CDD:275380 8/23 (35%)
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 8/32 (25%)
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064 69/254 (27%)
LRR_8 194..254 CDD:290566 8/30 (27%)
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380 7/19 (37%)
leucine-rich repeat 244..267 CDD:275380 5/31 (16%)
LRR_8 271..330 CDD:290566 20/69 (29%)
leucine-rich repeat 272..295 CDD:275380 9/33 (27%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
LRR_8 319..380 CDD:290566 20/62 (32%)
leucine-rich repeat 320..343 CDD:275380 10/22 (45%)
leucine-rich repeat 344..369 CDD:275380 9/26 (35%)
LRR_8 368..428 CDD:290566 14/60 (23%)
leucine-rich repeat 370..393 CDD:275380 2/22 (9%)
leucine-rich repeat 394..417 CDD:275380 8/23 (35%)
leucine-rich repeat 418..441 CDD:275380 9/22 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453544
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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