DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and Slitrk3

DIOPT Version :9

Sequence 1:NP_001163434.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001344780.1 Gene:Slitrk3 / 386750 MGIID:2679447 Length:980 Species:Mus musculus


Alignment Length:489 Identity:111/489 - (22%)
Similarity:166/489 - (33%) Gaps:94/489 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VSISHTNAAPAGSEEANPLEDFNYGDDDYSETATGEESPETAENRLMPQSSSTSTTTTFRPIFNI 81
            :|.|..||.|...........|.....:|.   :..:.|:..:....|:..|||......|  |.
Mouse   299 LSSSKENAWPTKPSSMLSSVHFTASSVEYK---SSNKQPKPTKQPRTPRPPSTSQALYPGP--NQ 358

  Fly    82 PRRSNHVLEPS----CPRNCLC---LEDFKF-VQCANAHLTHVP--LDMPKTAAIIDLSHNVIAE 136
            |..:.:...|.    ||..|.|   :.|... |.|......::.  |..|..|..:.||.|:|.:
Mouse   359 PPIAPYQTRPPIPIICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQK 423

  Fly   137 LRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTKIDPDTFAAAKELTLLDL 201
            :...||.|.|....::|.:|.||.:....|.....||.|.|..|.:.|:.|..|...:.|..|..
Mouse   424 IYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYF 488

  Fly   202 SNNTITQRLDGSFLNQPDLVEFSCVNCSWTELPEQTFQNMSGLEVLRLNKNDFKQQINTKAFSPL 266
            ..|.|.:....:|...|:|......|.....||...|...| |..|.|.||.|...........|
Mouse   489 EFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTS-LARLNLRKNYFLYLPVAGVLEHL 552

  Fly   267 TKIIKLKLPELEQQNIEELCSLLTSIDTISFLNY--DISCYEFVLGTPFNGSLIYPTEPPLKGIT 329
            ..|:::.|.|.......:|......|:|||.::.  |:.|     .||.|     .|...::.|.
Mouse   553 NAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLC-----RTPEN-----LTHRDVRTIE 607

  Fly   330 NPPIVASITSTAKPVTATPAPPRSANRNRGKMDNSTELVKAGILSSETSTSGVSVEPPAESQTNQ 394
            ...:...:...|:|   .|:||:..:.:..              ...||.|.....||.      
Mouse   608 LEVLCPEMLHIAQP---GPSPPQPGDYHPN--------------GGPTSASPYEFSPPG------ 649

  Fly   395 VQISQEAINTLLICIMVL--AVIGIVIGLIC---------------RQ---DIGGIKTKCCR--- 436
               ....::.|::.::||  :.:.:..||..               ||   |:.||:.:|.|   
Mouse   650 ---GPVPLSVLILSLLVLFFSAVFVAAGLFAYVLRRRRKKLPFRSKRQEGVDLTGIQMQCHRLFE 711

  Fly   437 ----------------TSKPEPKDQV-HPTEEIP 453
                            .|.||....| |..|.||
Mouse   712 DSGGNSGGSGGGGRPTLSSPEKAPPVGHVYEYIP 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_001163434.1 LRR_8 126..182 CDD:290566 18/55 (33%)
leucine-rich repeat 128..147 CDD:275380 7/18 (39%)
leucine-rich repeat 148..171 CDD:275380 5/22 (23%)
LRR_RI <150..225 CDD:238064 20/74 (27%)
LRR_8 171..254 CDD:290566 25/82 (30%)
leucine-rich repeat 172..195 CDD:275380 8/22 (36%)
leucine-rich repeat 196..219 CDD:275380 5/22 (23%)
leucine-rich repeat 220..243 CDD:275380 5/22 (23%)
leucine-rich repeat 244..268 CDD:275380 7/23 (30%)
Slitrk3NP_001344780.1 LRR 1 79..100
leucine-rich repeat 82..103 CDD:275380
LRR 2 103..124
leucine-rich repeat 104..127 CDD:275380
LRR_8 106..162 CDD:338972
LRR 3 127..148
leucine-rich repeat 128..151 CDD:275380
LRR_8 151..209 CDD:338972
LRR 4 151..172
leucine-rich repeat 152..175 CDD:275380
LRR 5 175..196
leucine-rich repeat 176..198 CDD:275380
LRR 6 198..219
leucine-rich repeat 199..403 CDD:275380 23/108 (21%)
leucine-rich repeat 225..301 CDD:275380 0/1 (0%)
LRRCT 233..>271 CDD:214507
leucine-rich repeat 315..411 CDD:275380 20/100 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..361 9/39 (23%)
leucine-rich repeat 404..434 CDD:275380 10/29 (34%)
LRR 7 410..431 7/20 (35%)
LRR_8 434..493 CDD:338972 16/58 (28%)
LRR 8 434..455 5/20 (25%)
leucine-rich repeat 435..458 CDD:275380 5/22 (23%)
LRR 9 458..479 8/20 (40%)
leucine-rich repeat 459..482 CDD:275380 8/22 (36%)
LRR 10 482..503 5/20 (25%)
leucine-rich repeat 483..502 CDD:275380 4/18 (22%)
LRR 11 506..527 5/20 (25%)
leucine-rich repeat 507..529 CDD:275380 5/21 (24%)
LRR 12 529..550 7/21 (33%)
leucine-rich repeat 530..554 CDD:275380 7/23 (30%)
LRRCT 563..>598 CDD:214507 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 622..644 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..735 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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