Protein Alignment CG42709 and CG5888

DIOPT Version :10

• Sequence 1: NP_648600.1
• Gene: CG42709 / 39453
• FlyBaseID: FBgn0261674
• Length: 458
• Species: Drosophila melanogaster
• Sequence 2: NP_609794.1
• Gene: CG5888 / 34980
• FlyBaseID: FBgn0028523
• Length: 455
• Species: Drosophila melanogaster
• Alignment Length: 263
• Identity: 60/263 - (22%)
• Similarity: 102/263 - (38%)
• Gaps: 38/263 - (14%)

  Fly    28 GSEEANPLEDFNYGDDDYSETATGEE-SPETAENRLMPQSSSTSTTTTFRPIF--NIPRRSNHVL 89
            |......||.|||.|.  .:|..||. .....::..:.:.|.....:|....|  |:|......|
  Fly   111 GVSNYTELEIFNYFDP--KKTDRGEVLQQHYTDHESLKKVSIIGFKSTLPENFLENLPALQQLSL 173

  Fly    90 EPS--CPRNCLCLEDFKFVQCANAHLTHVPL---DMPKTAAII-----DLSHNVI---------- 134
            :.|  .|.|  .|...|       :|||:.:   ::.|.:..|     .|.|.:|
  Fly   174 KGSSDLPGN--ILHPLK-------NLTHLEIVVKNLGKVSGAIFAKQSKLKHLMIDCDAKNSSVE 229

  Fly   135 -AELRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTKIDPDTFAAAKELTL 198
             :...|::..:::....|.| .|...::..::|..||:|..:.:.:| ::.:..|.....|:|..
  Fly   230 MSAFGPQELWHMTELQSIEL-FNCGDNVPTELFWMSEQLAYIGIRSN-ISYLSKDFLKVQKKLLT 292

  Fly   199 LDLSNNTITQRLDGSFLNQPDLVEFSCVNCSWTELPEQTFQNMSGLEVLRLNKNDFKQQINTKAF 263
            |.|..|.|.:..|..|.|.|.::|......:...:....|..:..|:||.|..|.. ..|...||
  Fly   293 LRLERNNIARLPDQLFRNTPLILEIHLAFNNLDRIQSGLFDKLKNLQVLNLEHNPI-TTIALNAF 356

  Fly   264 SPL 266
            :|:
  Fly   357 TPI 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42709	NP_648600.1	LRR	<127..>300	CDD:443914	35/156 (22%)
		leucine-rich repeat	128..147	CDD:275380	4/29 (14%)
		leucine-rich repeat	148..171	CDD:275380	5/22 (23%)
		leucine-rich repeat	172..195	CDD:275380	3/22 (14%)
		leucine-rich repeat	196..219	CDD:275380	8/22 (36%)
		leucine-rich repeat	220..243	CDD:275380	2/22 (9%)
		leucine-rich repeat	244..268	CDD:275380	9/23 (39%)
CG5888	NP_609794.1	LRR	<160..>359	CDD:443914	47/210 (22%)
		leucine-rich repeat	168..189	CDD:275380	6/29 (21%)
		leucine-rich repeat	190..213	CDD:275380	5/22 (23%)
		leucine-rich repeat	214..243	CDD:275380	4/28 (14%)
		leucine-rich repeat	244..266	CDD:275380	5/22 (23%)
		leucine-rich repeat	267..289	CDD:275380	3/22 (14%)
		leucine-rich repeat	290..313	CDD:275380	8/22 (36%)
		leucine-rich repeat	314..337	CDD:275380	2/22 (9%)
		leucine-rich repeat	338..357	CDD:275380	7/19 (37%)