DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and CG16974

DIOPT Version :10

Sequence 1:NP_648600.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_609610.2 Gene:CG16974 / 34713 FlyBaseID:FBgn0032479 Length:1257 Species:Drosophila melanogaster


Alignment Length:445 Identity:95/445 - (21%)
Similarity:160/445 - (35%) Gaps:137/445 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLSVSISHTN-----AAPAGSEEANPLE--------DFNYGDDDYSETATGEESPETAENRLMPQ 65
            |||...||.|     .|...::.:|||:        :|::            :|.|..:..||..
  Fly   142 LLSQRSSHINYNQLMLAHVPADRSNPLKLPQLESLREFSW------------QSSELKDETLMEL 194

  Fly    66 SSSTSTTTTFRPIFNIPRRSNHVLEPSCPRNCLCLEDFKFVQCANAHLTH---VPLDMPKTAAII 127
            .:....:..:....|:.......|..:.|   |.:...|.::.:...|::   :.|...|....:
  Fly   195 FTRQPRSFEYMERLNLAENRLECLHWAIP---LAVRRVKVLEMSGNRLSNCSLLNLQYMKQLQEL 256

  Fly   128 DLSHNVIAELRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTKIDPDTFAA 192
            .|..:.:..|.......||....:||:.||::.:.:|:|.|:.:|:||.|:.|||:.:....|..
  Fly   257 HLDRSELTYLPQRFLGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQT 321

  Fly   193 AKELTLLDLSNNTITQRLDGSF-----------------------------LNQPDLVEFS---- 224
            |.:|.:||||:|.:....|..|                             |.|.||.:.|    
  Fly   322 AADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVI 386

  Fly   225 ------------CVNCS---WTELPEQTFQNMSGLEVLRLNKNDFKQQINTKAFSPLTKIIKLKL 274
                        .:|.|   .|.|....||::..|..|.|::|.|| |:.:..|.....::.|::
  Fly   387 DRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFK-QLPSGLFQRQRSLVLLRI 450

  Fly   275 PELEQQNIEELCSLLTSIDTISFLNYDISCYEFVLGTPFNGSLIYPTEPPLKGITNPPIV----- 334
            .|             |.|:  .|.|: ||.|:                   :.:.:|.::     
  Fly   451 DE-------------TPIE--QFSNW-ISRYD-------------------ESLVDPQVLHRLRY 480

  Fly   335 ASITSTAK----PVTATPAPPRSANRNRGKMDNSTELVKA--GILSSETSTSGVS 383
            .|:....|    |.|.....|           |..||:.|  |:|...|..||:|
  Fly   481 LSVQQNRKLTYLPATLFANTP-----------NIRELLLAENGLLQLPTQISGLS 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_648600.1 LRR <127..>300 CDD:443914 52/220 (24%)
leucine-rich repeat 128..147 CDD:275380 3/18 (17%)
leucine-rich repeat 148..171 CDD:275380 7/22 (32%)
leucine-rich repeat 172..195 CDD:275380 9/22 (41%)
leucine-rich repeat 196..219 CDD:275380 10/51 (20%)
leucine-rich repeat 220..243 CDD:275380 8/41 (20%)
leucine-rich repeat 244..268 CDD:275380 8/23 (35%)
CG16974NP_609610.2 leucine-rich repeat 206..228 CDD:275380 4/24 (17%)
leucine-rich repeat 229..252 CDD:275380 3/22 (14%)
LRR <230..531 CDD:443914 76/342 (22%)
leucine-rich repeat 253..276 CDD:275380 3/22 (14%)
leucine-rich repeat 277..300 CDD:275380 7/22 (32%)
leucine-rich repeat 301..324 CDD:275380 9/22 (41%)
leucine-rich repeat 325..348 CDD:275380 8/22 (36%)
leucine-rich repeat 349..372 CDD:275380 0/22 (0%)
leucine-rich repeat 373..396 CDD:275380 5/22 (23%)
leucine-rich repeat 397..420 CDD:275380 6/22 (27%)
leucine-rich repeat 421..444 CDD:275380 8/23 (35%)
leucine-rich repeat 478..502 CDD:275380 5/34 (15%)
leucine-rich repeat 503..526 CDD:275380 9/22 (41%)
Ig <714..761 CDD:472250
Ig strand C 714..718 CDD:409358
Ig strand E 734..738 CDD:409358
Ig strand F 748..753 CDD:409358
Blue background indicates that the domain is not in the aligned region.

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