| Sequence 1: | NP_001163434.1 | Gene: | CG42709 / 39453 | FlyBaseID: | FBgn0261674 | Length: | 458 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001101153.1 | Gene: | Slitrk3 / 310519 | RGDID: | 1310506 | Length: | 979 | Species: | Rattus norvegicus |
| Alignment Length: | 489 | Identity: | 112/489 - (22%) |
|---|---|---|---|
| Similarity: | 167/489 - (34%) | Gaps: | 94/489 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 17 VSISHTNAAPAGSEEANPLEDFNYGDDDYSETATGEESPETAENRLMPQSSSTSTTTTFRPIFNI 81
Fly 82 PRRSNHVLEPS----CPRNCLC---LEDFKF-VQCANAHLTHVP--LDMPKTAAIIDLSHNVIAE 136
Fly 137 LRPEDFANLSRAVEINLNHNLISSIDKDVFQGSERLKRLRLANNRLTKIDPDTFAAAKELTLLDL 201
Fly 202 SNNTITQRLDGSFLNQPDLVEFSCVNCSWTELPEQTFQNMSGLEVLRLNKNDFKQQINTKAFSPL 266
Fly 267 TKIIKLKLPELEQQNIEELCSLLTSIDTISFLNY--DISCYEFVLGTPFNGSLIYPTEPPLKGIT 329
Fly 330 NPPIVASITSTAKPVTATPAPPRSANRNRGKMDNSTELVKAGILSSETSTSGVSVEPPAESQTNQ 394
Fly 395 VQISQEAINTLLICIMVL--AVIGIVIGLIC---------------RQ---DIGGIKTKCCR--- 436
Fly 437 ----------------TSKPEPKDQV-HPTEEIP 453 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG42709 | NP_001163434.1 | LRR_8 | 126..182 | CDD:290566 | 18/55 (33%) |
| leucine-rich repeat | 128..147 | CDD:275380 | 7/18 (39%) | ||
| leucine-rich repeat | 148..171 | CDD:275380 | 5/22 (23%) | ||
| LRR_RI | <150..225 | CDD:238064 | 20/74 (27%) | ||
| LRR_8 | 171..254 | CDD:290566 | 25/82 (30%) | ||
| leucine-rich repeat | 172..195 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 196..219 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 220..243 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 244..268 | CDD:275380 | 7/23 (30%) | ||
| Slitrk3 | NP_001101153.1 | leucine-rich repeat | 81..102 | CDD:275380 | |
| leucine-rich repeat | 103..126 | CDD:275380 | |||
| LRR_8 | 105..161 | CDD:290566 | |||
| leucine-rich repeat | 127..150 | CDD:275380 | |||
| LRR_8 | 150..208 | CDD:290566 | |||
| leucine-rich repeat | 151..174 | CDD:275380 | |||
| leucine-rich repeat | 175..197 | CDD:275380 | |||
| leucine-rich repeat | 198..402 | CDD:275380 | 23/108 (21%) | ||
| LRRCT | 232..>270 | CDD:214507 | |||
| leucine-rich repeat | 403..433 | CDD:275380 | 10/29 (34%) | ||
| LRR_8 | 432..492 | CDD:290566 | 17/59 (29%) | ||
| LRR_4 | 433..473 | CDD:289563 | 11/39 (28%) | ||
| leucine-rich repeat | 434..457 | CDD:275380 | 5/22 (23%) | ||
| LRR_4 | 456..497 | CDD:289563 | 12/40 (30%) | ||
| leucine-rich repeat | 458..481 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 482..501 | CDD:275380 | 4/18 (22%) | ||
| leucine-rich repeat | 506..528 | CDD:275380 | 5/21 (24%) | ||
| leucine-rich repeat | 529..553 | CDD:275380 | 7/23 (30%) | ||
| LRRCT | 562..>597 | CDD:214507 | 10/44 (23%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||