DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and Lrrtm3

DIOPT Version :9

Sequence 1:NP_001163434.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_848793.1 Gene:Lrrtm3 / 216028 MGIID:2389177 Length:582 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_001163434.1 LRR_8 126..182 CDD:290566
leucine-rich repeat 128..147 CDD:275380
leucine-rich repeat 148..171 CDD:275380
LRR_RI <150..225 CDD:238064
LRR_8 171..254 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..268 CDD:275380
Lrrtm3NP_848793.1 LRRNT 33..61 CDD:214470
LRR 1 63..83
leucine-rich repeat 66..86 CDD:275380
LRR_RI <81..300 CDD:238064
LRR_8 86..145 CDD:290566
LRR 2 86..107
leucine-rich repeat 87..110 CDD:275380
LRR 3 110..131
leucine-rich repeat 111..134 CDD:275380
LRR_8 133..193 CDD:290566
LRR 4 134..155
leucine-rich repeat 135..158 CDD:275380
LRR 5 158..179
leucine-rich repeat 159..182 CDD:275380
LRR_8 181..241 CDD:290566
LRR 6 182..203
leucine-rich repeat 183..206 CDD:275380
LRR 7 206..226
leucine-rich repeat 207..230 CDD:275380
LRR_8 230..290 CDD:290566
LRR 8 230..251
leucine-rich repeat 231..254 CDD:275380
LRR 9 254..275
leucine-rich repeat 255..279 CDD:275380
LRR 10 279..300
leucine-rich repeat 280..300 CDD:275380
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..410
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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