DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42709 and Omg

DIOPT Version :9

Sequence 1:NP_001163434.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_062282.2 Gene:Omg / 18377 MGIID:106586 Length:443 Species:Mus musculus


Alignment Length:425 Identity:101/425 - (23%)
Similarity:173/425 - (40%) Gaps:116/425 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 CPRNCLCLEDFKFVQCANAHLTHVPLDMPKTAAIIDLSHNVIAELRPE--DFANLSRAVEINLN- 154
            ||..|.|.|..:.|.|:..:||.:|..:.:....::||:|...:|..:  .:.|| |.::|:.| 
Mouse    29 CPLQCTCTERHRHVDCSGRNLTTLPPGLQENIIHLNLSYNHFTDLHNQLTPYTNL-RTLDISNNR 92

  Fly   155 ------------------HNLISSIDKDVFQGSERLKRLRLANNRLTKI--DPDTFAAAKELTL- 198
                              :|.|..:||........||.|.::.|.|.|:  ..:|..:.:.|.| 
Mouse    93 LESLPAQLPRSLWNMSAANNNIKLLDKSDTAYQWNLKYLDVSKNMLEKVVLIKNTLRSLEVLNLS 157

  Fly   199 -----------------LDLSNNTITQRLDGSFLNQPDLVEFSCVNCSWTELPEQTFQNMSGLEV 246
                             :|||||::||.|.|:.:|..:|......|..:|.:|||:|..:..|:.
Mouse   158 SNKLWTVPTNMPSKLHIVDLSNNSLTQILPGTLINLTNLTHLYLHNNKFTFIPEQSFDQLLQLQE 222

  Fly   247 LRLNKN----DFKQQI--------NTKAF---SPLTKIIKLKLPELEQQNIEE-----LCSLLT- 290
            :.|:.|    |.||.|        .|||.   :|.:|    ::..|::|::..     ..||.| 
Mouse   223 ITLHNNRWSCDHKQNITYLLKWVMETKAHVIGTPCSK----QVSSLKEQSMYPTPPGFTSSLFTM 283

  Fly   291 ----SIDTISFLNY-----------DISCYEFVLG------TPFNGS----LIYPTEPPLKGITN 330
                ::|||:.|:.           .....|...|      |.|:.:    :.||.:.|.: :||
Mouse   284 SEMQTVDTINSLSMVTQPKVTKTPKQYRGKETTFGVTLSKDTTFSSTDRAVVAYPEDTPTE-MTN 347

  Fly   331 PPIVASIT----------STAKPVTATPAPPRSANRN--RGKMDNSTELVKAGI---LSSETSTS 380
            ....|:.|          |.|...:||.:||.....:  ||..:|.:|:.:...   |..|.:|:
Mouse   348 SHEAAAATLTIHLQDGMSSNASLTSATKSPPSPVTLSIARGMPNNFSEMPRQSTTLNLRREETTA 412

  Fly   381 GVSVEPPAESQTNQVQISQEAINTLLICIMVLAVI 415
            ..:..||:.:...:|..|        :.:|:.||:
Mouse   413 NGNTRPPSAASAWKVNAS--------LLLMLNAVV 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_001163434.1 LRR_8 126..182 CDD:290566 17/76 (22%)
leucine-rich repeat 128..147 CDD:275380 6/20 (30%)
leucine-rich repeat 148..171 CDD:275380 6/41 (15%)
LRR_RI <150..225 CDD:238064 26/113 (23%)
LRR_8 171..254 CDD:290566 29/106 (27%)
leucine-rich repeat 172..195 CDD:275380 7/24 (29%)
leucine-rich repeat 196..219 CDD:275380 12/40 (30%)
leucine-rich repeat 220..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..268 CDD:275380 11/38 (29%)
OmgNP_062282.2 LRRNT 28..62 CDD:214470 10/32 (31%)
leucine-rich repeat 40..59 CDD:275380 5/18 (28%)
LRR_RI <77..234 CDD:238064 38/157 (24%)
LRR_8 81..161 CDD:290566 18/80 (23%)
leucine-rich repeat 83..103 CDD:275380 4/20 (20%)
leucine-rich repeat 104..127 CDD:275380 4/22 (18%)
leucine-rich repeat 128..150 CDD:275380 7/21 (33%)
leucine-rich repeat 151..171 CDD:275380 2/19 (11%)
LRR_8 170..229 CDD:290566 19/58 (33%)
leucine-rich repeat 172..195 CDD:275380 10/22 (45%)
leucine-rich repeat 196..219 CDD:275380 7/22 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 64 1.000 Inparanoid score I5367
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.