DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42709 and kera

DIOPT Version :10

Sequence 1:NP_648600.1 Gene:CG42709 / 39453 FlyBaseID:FBgn0261674 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_002937114.3 Gene:kera / 100486796 XenbaseID:XB-GENE-1012702 Length:379 Species:Xenopus tropicalis


Alignment Length:458 Identity:101/458 - (22%)
Similarity:161/458 - (35%) Gaps:168/458 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IFLLSVSISHTNAAPAGSEEANPLEDFNYGDDDYSETATGEESPETAENRLMPQSSSTSTTTTFR 76
            :|||.:..|.|::.....              ||::..|                         .
 Frog    38 LFLLVIIFSFTHSVTQAY--------------DYTDLGT-------------------------Y 63

  Fly    77 PIFNIPRRSNHVLEPSCPRNCLCLEDFKF-VQCANAHLTHVPLDMPKTAAIIDLSHNVIAELRPE 140
            |:|:|          .||:.|:|...|.. :.|.|..|..|| .:|.....:.|.:|:|..|:.|
 Frog    64 PLFSI----------DCPKECVCPSSFPHAIYCDNKGLKEVP-HIPSRTWYLYLHNNLIESLKEE 117

  Fly   141 DFANLSRAVEINLNHNLIS--SIDKDVFQG---------------------SERLKRLRLANNRL 182
            .|||.:....|||:.|.:|  :|.|.:.:.                     .|.::::|||.|::
 Frog   118 SFANATEIKWINLSRNKLSNKNISKSLLKSLKSLLYLYLDDNDLEEVPAPLPESIEQIRLARNKI 182

  Fly   183 TKIDPDTFAAAKELTLLDLSNNTITQRLDGSFLNQPDLVEFSCVNCSWTELPEQTFQNMSGLEVL 247
            :|:....|:....||||||.:|.:|   |.||  |.|:                 |..:..|..|
 Frog   183 SKVPEGVFSKLGNLTLLDLHHNKLT---DSSF--QADV-----------------FNGLKSLMQL 225

  Fly   248 RLNKNDFKQQ-----INTKAFSPLTKIIKLKLPELEQQNIEEL-CSLLTSIDTISF--LNYD-IS 303
            .|.||..|:.     :||         ::|   .|:..||||: .:...:|..|:|  |||: :|
 Frog   226 NLAKNSLKKMPPGLPLNT---------VQL---YLDNNNIEEIPKNYFNNIPRITFIRLNYNKLS 278

  Fly   304 CYEFVLGTPFNGSLIYPTEPPLKGITNPPIVASITSTAKPVTATPAPPRSANRNRGKMD-NSTEL 367
                ..|.|.|             :.|...:..:..:...:||.|..  :.:..|..:| |..:.
 Frog   279 ----DTGVPVN-------------VFNVTSLLDLQLSYNELTAVPIV--NGHLERLHLDHNKIKN 324

  Fly   368 VKAGILSSET------------------STSGVSVEPPAESQTNQVQISQEAINTLLICIMVLAV 414
            :...||..|.                  ...|..|:||....             |:||..:|..
 Frog   325 INGNILCPEVVKEEFDPHFPHGPRLRYLRLDGNEVQPPIPLD-------------LMICFRLLQT 376

  Fly   415 IGI 417
            :.|
 Frog   377 VVI 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42709NP_648600.1 LRR <127..>300 CDD:443914 54/203 (27%)
leucine-rich repeat 128..147 CDD:275380 8/18 (44%)
leucine-rich repeat 148..171 CDD:275380 7/45 (16%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
leucine-rich repeat 196..219 CDD:275380 12/22 (55%)
leucine-rich repeat 220..243 CDD:275380 1/22 (5%)
leucine-rich repeat 244..268 CDD:275380 8/28 (29%)
keraXP_002937114.3 LRRNT 69..103 CDD:214470 11/34 (32%)
PRK15370 <90..>329 CDD:185268 71/292 (24%)
leucine-rich repeat 101..124 CDD:275380 8/22 (36%)
leucine-rich repeat 125..150 CDD:275380 7/24 (29%)
leucine-rich repeat 151..171 CDD:275380 0/19 (0%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
leucine-rich repeat 196..221 CDD:275380 14/46 (30%)
leucine-rich repeat 222..245 CDD:275380 8/31 (26%)
leucine-rich repeat 246..266 CDD:275380 7/22 (32%)
leucine-rich repeat 267..291 CDD:275380 10/40 (25%)
leucine-rich repeat 312..348 CDD:275380 6/35 (17%)

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