DRSC/TRiP Functional Genomics Resources

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Protein Alignment LDHB and Ldh

DIOPT Version :10

Sequence 1:XP_006719137.1 Gene:LDHB / 3945 HGNCID:6541 Length:353 Species:Homo sapiens
Sequence 2:NP_476581.1 Gene:Ldh / 45880 FlyBaseID:FBgn0001258 Length:332 Species:Drosophila melanogaster


Alignment Length:280 Identity:177/280 - (63%)
Similarity:232/280 - (82%) Gaps:5/280 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATLKEKLIAPVAEEEATVPN--NKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEM 63
            ||.:|:.|:|.|||   .:|:  :|:|:||:||||||.|.|||.::::.|:.|:||..|||:||:
  Fly     1 MAAIKDSLLAQVAE---VLPSSGHKVTIVGIGQVGMASAFSILAQNVSKEVCLIDVCADKLQGEL 62

Human    64 MDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY 128
            |||||||.||:.|:|.|..|::.:|||::.:|||||||:||||||:|||||.::.|.|||::|:|
  Fly    63 MDLQHGSNFLKNPQITASTDFAASANSRLCIVTAGVRQKEGESRLSLVQRNTDILKNIIPKLVEY 127

Human   129 SPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGE 193
            |||.|:::|||||||:|||.||||||||:||||||.||||:|||:||:::||:.|:||||||:||
  Fly   128 SPDTILLMVSNPVDIMTYVAWKLSGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGE 192

Human   194 HGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVA 258
            ||||||.||||||:|||.|:||||.:||..|.|.|.|:||.||:||||||||||||:||||||.|
  Fly   193 HGDSSVPVWSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLKGYTSWAIGLSTA 257

Human   259 DLIESMLKNLSRIHPVSTMV 278
            .|..::|:|.|.:..|||.|
  Fly   258 SLASAILRNTSSVAAVSTSV 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LDHBXP_006719137.1 LDH_1 20..279 CDD:133429 169/261 (65%)
LdhNP_476581.1 LDH_1 18..329 CDD:133429 168/260 (65%)

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