DRSC/TRiP Functional Genomics Resources

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Protein Alignment LDHB and CG13334

DIOPT Version :10

Sequence 1:XP_006719137.1 Gene:LDHB / 3945 HGNCID:6541 Length:353 Species:Homo sapiens
Sequence 2:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster


Alignment Length:259 Identity:103/259 - (39%)
Similarity:165/259 - (63%) Gaps:1/259 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    22 NKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV 86
            :||:|||.||||.|.:..:|.::|...|.::|:..:..|.|.:|.||.|.||...::|...|.:.
  Fly    49 SKISVVGAGQVGTAISAMLLLRNLTKNLVILDINYELAKAEALDFQHASAFLSDARVVPCGDSTN 113

Human    87 TANSKIVVVTAGVRQQ-EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVTWK 150
            :.:|.:|::|||.|.. :..|||..:|:.|.:.|..:|::|:.||:...|::|||.|::||...:
  Fly   114 SKDSDVVIITAGARPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNPADVMTYAVQR 178

Human   151 LSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQEL 215
            ::.|||||...:||:||:.|||.|:|.:|.:.||..||:::||||.|:|.|||.|::||:.|.::
  Fly   179 ITNLPKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGEHGASAVPVWSSVSIAGIRLNDV 243

Human   216 NPEMGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVK 279
            ...:...:|.|||.:::|.|......|.|.||||||||.|:.||::::|.....:|..|.|.:|
  Fly   244 VKNLACGDDPENWAKINKQVTTGGLAVAKTKGYTNWAIALTCADIVQAMSGGKGKIACVGTDMK 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LDHBXP_006719137.1 LDH_1 20..279 CDD:133429 102/257 (40%)
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 103/259 (40%)

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