Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013060.1 | Gene: | VPS13 / 850619 | SGDID: | S000003963 | Length: | 3144 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 4130 | Identity: | 786/4130 - (19%) |
---|---|---|---|
Similarity: | 1423/4130 - (34%) | Gaps: | 1359/4130 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
Fly 66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLD----TAEAGWRSEKG 126
Fly 127 KQMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFED---IVDTGKSKICTGIKIGSLTA 188
Fly 189 QSCDCDWTNGSYKMNNNEMNYKLVELKELSVYWD-----LLHEDIKCQSYSN-----QEILEKMH 243
Fly 244 STCELRSHNFIIKPICATARWKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQRLQMLDKLSE 308
Fly 309 IRQVKEVRQYRLKRPTCTVESNPIAWWKYATIC-----HGFDFKKNEE-KWLMLKENLRYMLLYK 367
Fly 368 SIILN--PNENLSA--ADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAF------------- 415
Fly 416 -------ESQNEQGKNMLFHWFPNWMGWYANSPSTPNNEQDESLKHLEDDILVALENSLQNSSDL 473
Fly 474 KSDAVFGHFSIKLLKGLVILQTEDKLNDGRNKSMEMQFNNFSAYLQLSPQLTSYTVGISLQEVYL 538
Fly 539 IDKTSSDTMHNYLIKPQTGNTATPNQLVKNAALQEDILFQLQYENCNHLRFQLNIKSKGLDLIYN 603
Fly 604 EDAIQWLLDFLADSNSFKYSPRNRVAKKTDFMKNWNEMFSGNEVNRKIWMFEIEIFAPRIIFLEN 668
Fly 669 YKVSNSLMVLLDFGKLEMRKMEVKRVIPVIESAVTENTSDDDETYLTPCSTPPASEKSGSESPTL 733
Fly 734 LENPKTESFLNKNVQLEYVLHNKIYDKYLINFTNLQVLVCKYEERWQACLKTSSNFHLIDKF--- 795
Fly 796 NINLTLEQRNIFTVDPEYPSFMLFGTCPTILIHGNEELINNCCNIMKPIIKASKE-MENIYRGGN 859
Fly 860 TIYASERIKNLAEDDRSRVVIEFVMDQLVIEMQSTERSIAELQIIGARAGLTKEPHETNISMSVH 924
Fly 925 GLLLVDAIQSFGPDFELLVASHRHVGMDSLSGSLKHSAIVSPTSPGSPNFFDRATSPHMITKAVQ 989
Fly 990 NIKMGDRSTEFCDDEDSTALISVDIKIVPPNESNSMQLHTTSITFNSLDIIANQDTIIEILNFAK 1054
Fly 1055 RTLLAQNIFPSESPESPKEATEAPVDVVDQVDHKSHNEIFFDFFRLNILLLYTIKRD-KFNVGRK 1118
Fly 1119 VGTVTLTEAKIN-ASFQSDLSIIGSLGGIQVIDI----------TSEAFCH-PRI-LSVGRDQIL 1170
Fly 1171 RASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMRMASASYTHCPRFL 1235
Fly 1236 RDVNACITYFKRSLREFATSIGNKATDMAKEFVQQ----VRAVEQIGPVYPQRNRQDNWLDIIIS 1296
Fly 1297 SPIIILPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEI---KNTYVYSLNIDEGEYSFN 1358
Fly 1359 VHPAKNKDAIPILHDTAITLQLYAGYSDDNDEDKQLNRFSIKGSMVEALKVSLNRKQYELLLESI 1423
Fly 1424 RYATNFSNEVLNESDELDQNGDIEPTANIDAESIISTTIQFSVPVFQINLQNEYHND-LINLTFK 1487
Fly 1488 NFNVKHISKGFDKDVEVVLKSVLMEDLKSDLTSPFRNMVTSVDLEQKIKKNEMTSSSCPDLPSYC 1552
Fly 1553 NSLKNRSSSVPSCFYNHMQVKVFGGDQKYTSSNKNELGKKKESQTLVIYKSHTGRSAQNGKLEQT 1617
Fly 1618 SSIQFNCLNLAICVERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKHIDKVCSKLKVSIRSFNFTL 1682
Fly 1683 IRNESLLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLTKYG----NIYKQKFLTSGTEALNF 1743
Fly 1744 VYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTKRFSTELHVFVKDLLQLQTPVIRKLKKHG--- 1805
Fly 1806 -----SEQNMRPS-------KMKLVIQADSPVIVLP----SSYNRNEVIIAYLGQFSLKNSFHFA 1854
Fly 1855 SDNNIISKMSATPSKDEILDVMRIDLVNINLFSGERSSMKAKADQEKDRIIIADMNFLRLGQPFF 1919
Fly 1920 NESCFLHL---QL------------------------------------ERNLSADAHRVCPDIS 1945
Fly 1946 VQGTFSKLSGIINIQQYKLIRSFLNNNIGEQTDDIYMNYHNNSCTSIERLSTINLMPKNEVSKIV 2010
Fly 2011 SILISIRILLEDVSLLLALNTSQSAAIEPLACIHFLKSTLEIDLFSDGSQDIDLISSNILIVDER 2075
Fly 2076 NESD--------KSNENVFKNILEPSKKEVRIENSVQVEVHCRKKATFSKYTIMLNNMRVFALLS 2132
Fly 2133 FLDQLKS-------YLQEDSPAPVVNNAANQIAQKPQIDTSISTEYVVNITDSEIIFAEECSRLD 2190
Fly 2191 SNAIILKSTTVICYKPNSNIVPLSLDINHLEIFSCTLDAEEESALSIIDPF--TLIIELRSNCLN 2253
Fly 2254 ILIQ------KHLNIRLSYVDVKL----FSRMARLLPTQTSRPKNVISKADSDLEKAAPLVAMGF 2308
Fly 2309 EISDCLYAMQINNWRINDAAIWLSQQKQ--NTYRNPALEMKTAVV-------DASLISVFIIDDC 2364
Fly 2365 MDADVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYSLGNIDTEVSVNYYNRRLSGWEPVAETWE 2429
Fly 2430 SNLNWKYTKGHLDNKKRFEIGISSKQMLKLNVTSTFIELFHMVLKNWTNDFNDNGAKNFRQRSPF 2494
Fly 2495 IPFALQNLSGTPLLFKPIYAPLGDLTRSD-LQQVELIK----------NWYSVQPNETKTFDFSQ 2548
Fly 2549 KSKLRHVHSHQLNLHQIFVQIHGWTLIGPISVDKVGMFFRTTKLDSQFL-------TKSRIVFDI 2606
Fly 2607 SLIGSAQKLIKVKSSLGVINKLDRNVFLKMTLKGTHSDGLSSISVIKPNDELSVPLKF-IDASLY 2670
Fly 2671 VAHNTSESDAYEDTGFSNEEILWKA---------C-GKDDTRQ-----LLAGYDTNKSILYTFVN 2720
Fly 2721 ISREIYHCKEQNLPGHKITLLPPLKINNMLCCDLMFKI----HEHATGRINSSESVNIYNVNI-- 2779
Fly 2780 -----CQPLNLSITLDNFQLSGQLKIPVSHRGVIEPK--LKLIDIQKRELHVRVSIQSVPG-KGM 2836
Fly 2837 ELYISAPVWIINKTGLPLIYKQEGTSHTAAGQFEEHETARQVAPLMFSF-SDQEGSPALVLRLGK 2900
Fly 2901 AYGSNNMWCKSFSTHKDLADRDLRAENTKGSYAIGISVRRGRGLYACTTFVTLSPRFHLHNRSGY 2965
Fly 2966 KLEFMQLCDIVNYDRPDPRKIISAP-------VDCNFAFHWPNWDQEQIICVRIPEIECCCWSKG 3023
Fly 3024 IPIKDVQSLYINV-RNEWGEMFFLRLEIISKDAT-----------------------FILLFTDA 3064
Fly 3065 RTLPPPIRIDNCSEVVINFSQLRS-KPVWITPVRPQSSLSYVMDDPLGQQILLMEAPGGNMIEFP 3128
Fly 3129 INNKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHRQLVLGVRGKKVVIVEKNSGDRSQLWLMNS 3193
Fly 3194 NGQLEHEGSTPPIQTNDANAVRLVLDLEKAPNPMEFTNL-VVRTPNKQRVTTQTWRFENGRLMCH 3257
Fly 3258 ANMCVQSRFGESGLKPNYEAVVGRTENRASSSKQIPIGQHIVAQKLRPGSGQLELSTKMDGPIST 3322
Fly 3323 IEICDIKIKQNSVFLTPDLLWMHASLNNRQITDKGKVSFVHEYLINVELV---KGIGISIIARKP 3384
Fly 3385 CEEIMFISLDHINCDIVQSALENSLDLNIAYIQIDNQLLDA-VSPIALHTQTSNDLEETQNAVVL 3448
Fly 3449 ---------KLKMLPSPNKNAIIFKYLTLDLKPSTASLEEKLILKVASFLGYGKINRQNLSVQYQ 3504
Fly 3505 FENTDDKPFLQDMKR---YYFENLSIGATQVRLSAFTSSKL-PVELHETKKA----------LGL 3555
Fly 3556 TLIKFEDALIELDR-YSDKLHFETMDVYRKELKKHYINQVKWHAAAILGSVDFLGNPLGFANDLS 3619
Fly 3620 EGVSGLIFE--------------------GSVKSLVKNVTHGISNSTAKLTETLSDSLGKVVLDD 3664
Fly 3665 HDNETRQRILELQSNTSGGHLAAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLSGLGKGLVG 3729
Fly 3730 TVTKPIIGVLDLASETASAVRETSRDSHRNAPERKRLPRCVTGAPGGLLPLYSNRQSKGQQYLYL 3794
Fly 3795 INQKNF-SEKIISYEPNLWSDKEARLRLLVSTEYV 3828 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 36/107 (34%) |
VPS13 | 147..368 | CDD:318996 | 62/239 (26%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 21/183 (11%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 139/709 (20%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 68/309 (22%) | ||
VPS13 | <3346..3802 | CDD:330393 | 127/504 (25%) | ||
VPS13 | NP_013060.1 | MRS6 | 1..2294 | CDD:227376 | 583/3147 (19%) |
MRS6 | <2356..3144 | CDD:227376 | 190/917 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157344434 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.970 |