Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001331612.1 | Gene: | AT5G24740 / 832543 | AraportID: | AT5G24740 | Length: | 3521 | Species: | Arabidopsis thaliana |
Alignment Length: | 4366 | Identity: | 830/4366 - (19%) |
---|---|---|---|
Similarity: | 1441/4366 - (33%) | Gaps: | 1551/4366 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNT---YLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIR 62
Fly 63 KIKLQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLDTAEAGWRSEKGK 127
Fly 128 QMESYYFSS--YNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQS 190
Fly 191 CDCDWTNGSYKMNN----------NEMNYKLVELKELSVYWDLLHEDIKCQSYSNQEILEKMHST 245
Fly 246 CE--LRSHNF--IIKPICATARWKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQRLQMLDKL 306
Fly 307 SEIRQVKEVRQ-YRLKRPTCT-VESNPIA----WWKYATICHGFDFKKN--EEKWLMLKENL--- 360
Fly 361 -RYMLLYK---SIILNPNENLSAADKEFKAYIESDRKISDLT-----------IMRRICFEKVFT 410
Fly 411 KGF--AFESQNEQ-------GKNMLFHWFPNWMGWYANSPSTPNNEQDESLKHLEDDILVALENS 466
Fly 467 LQNSSDLKSDAVFG--HFSIKLLKGLVILQTEDKLNDGRNK----SMEMQFNNFSAYLQLSPQLT 525
Fly 526 SYTVGISLQEVYLID--------KTSSDT-------MHNYLIKPQTGNTATPNQLVKNAALQEDI 575
Fly 576 L-------FQLQYENCNHLRFQLNIKSKGLDLIYNEDAIQWLLDFLADSNSFK------------ 621
Fly 622 YSPRNRVAKKTDFMKNWNEMFSGNEVNRKIWMFEIE----IFAPRIIFLENYKVSNSLMVLLDFG 682
Fly 683 KLEMRKMEVKRVIPVIESAVTENTSDDDETYLTPCSTPPASEKSGSESPTLLENPKTESFLNKNV 747
Fly 748 QLEYVLHNKIYDKYLINFTNLQVLVCKYEERWQACLKTSSNFHLIDKFNINLTLEQRNIFTVDPE 812
Fly 813 YPSFMLFGTCPTILIHGNEELINNCCNIMK-----------------PI-----------IKASK 849
Fly 850 EMENIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLVIEMQSTE----RSIAELQIIGAR--- 907
Fly 908 --AGLTKEPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSLSGSLKHSAIVSPTSPG 970
Fly 971 SPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIKIVPPNESNSMQLHTTSITFN 1035
Fly 1036 SLDIIANQDTIIEILNFAKRTLLAQNIFPS-ESPESPKEATEAPVDVVDQVDHKSHNEIFFDFFR 1099
Fly 1100 LNILLLYTIKRDKFNVGRKVGTVTLTE---AKINASFQSDLSIIGSLGGIQVIDITSEAFCHPRI 1161
Fly 1162 LSVGRDQILRASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMRMASA 1226
Fly 1227 SYTHCP-------RFLRDVNACITYFKRSLREFATSI---------GNKATDMAKEFVQQVRAVE 1275
Fly 1276 QIGPVYPQRNRQDNWLDIIISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEI 1340
Fly 1341 KNTYVYSLNIDEGEYSFNVHPAKNKDAIPILHDTAIT----LQLYAGYSDDNDEDKQLNRFSIKG 1401
Fly 1402 SMVEALKVSLNRKQYELLLESIRYATNFSNEVLNESDELDQNGDIEPTANIDAESI--------- 1457
Fly 1458 ISTTIQFSVP---VFQINLQNEYHNDLINLTFKNFNVKHISKGFDKDVEVVLKSVLMEDLKSDLT 1519
Fly 1520 SPFRNMVTSVDLEQKIKKNEMTSSSCPDLPSYCNSLKNRSSSVPSCFYNHMQVKVFGGDQKYTSS 1584
Fly 1585 NKNELGKKKESQTLVIYKSHTGRSAQNGKLEQTSSIQFNC----LNLAICVERWYTIFDFFGLVS 1645
Fly 1646 VDNVNEKYPEEMKLVEKHIDKVCSKLKVSIRSFNFTLIRNESLLSRVNVSNAVFMILQDPYSKIV 1710
Fly 1711 EGCLGSVSVNDLTKYGNIYKQKFLTSGTEALNFVYKKKLVDLEALNTLDTDSTLRINMSAVHYIH 1775
Fly 1776 TK-RFSTELHV--------FVK--DLLQLQTPVIRKLKKHGSEQNMRPSKMKLVIQADSPVIVLP 1829
Fly 1830 SSYNRNEVIIAYLGQFSLKNSFHFASDNNIISKMSATPSKDEILDVMRIDLVNINLFSGERSSMK 1894
Fly 1895 AKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLERNLSADAHRVCPDISVQGTFSKLSGIINI 1959
Fly 1960 QQYKLIRSFLNNNIGEQTDDIYMNYHNNSCTSIERLSTINLMPKNEVSKIVSILISIRILLEDVS 2024
Fly 2025 LLLALNTSQSAAIEPLACIHFLKSTLEIDLFSDGSQDIDLISSNILIVDERNESDKSNENVFKNI 2089
Fly 2090 LEPSK-KEVRIENSVQVEVHCRKKATFSKYTIMLNNMRVFALLSFLDQLKSYLQEDSPAPVVNNA 2153
Fly 2154 A--NQIAQKPQIDTSIS-TEYV-VNITDSEIIFAEECSRLDSNAIILKSTTVICYKPNSNIVPLS 2214
Fly 2215 LDINHLEIFSCTLDAEEESALSIIDPFTLIIELRSNCLNILIQKHLN--IRLSYVDV----KLFS 2273
Fly 2274 RMARLLPTQTSRPKNVISKAD----SD-LEKAAPLVAMGFEISDCLYAMQINNWR--INDAAIWL 2331
Fly 2332 SQQKQNTYRNPALEMKTAVVDASLISVFIIDDCMDADVPLLEVSLSKFLLNFTFQTQDPNPKETN 2396
Fly 2397 IRHYSLGNIDTEVSVNYYNRRLSGWEPVAETW--ESNLNWKY-TKGHLDNKKRFEIGISSKQMLK 2458
Fly 2459 LNVTST-------FIELFHMVLKNWTNDFNDNG-----AKNFRQRSPFIPFALQNLSGTPLLFK- 2510
Fly 2511 --------------------------PIYAPLGDLTRSDLQQVELIKNWYSVQPNETKT-FDFSQ 2548
Fly 2549 KSKLRHVHSHQLNLHQIFVQIHGWTLIG-PISVDKVGM------FFRTTKLDSQFLTKSR----- 2601
Fly 2602 -----IVFDISLIGSAQKLIKVKSSLGVINKLDRNVFLKMTLKGTHSDGLSS--ISVIKPNDELS 2659
Fly 2660 VPLKFI-----------DASLY-VAHNTSESDAYEDTGF-------------SNEEILWKACGKD 2699
Fly 2700 DTRQLLAGYDTNKSILYTFVNISREIYHCKEQNLPGHKITLLPPLKINNMLCCDLMFKIHEHATG 2764
Fly 2765 RINSSESV-----NIYNVNICQPLNLSITLDNFQLSGQLKIPVSHRGVIEPKL---KLIDIQKRE 2821
Fly 2822 LHVRVSIQSVPGKG----------------MELYISAPVWIINKTGLPLIY-------------- 2856
Fly 2857 -----------------------------------------KQEGTSHTAAGQ---FEEHET--A 2875
Fly 2876 RQV----------------------APLMFSFSDQEG-------SPALVLRLGKAYGSNNM---- 2907
Fly 2908 -----WCKSFSTH----------------KDLADRDLRAENTKGSYAIGISVRRGRGLYACTTFV 2951
Fly 2952 TLSPRFHLHNRSGYKLEFMQLCDIVNYDRPDPRKIISAPVDCNFAFHWPNWDQEQIICVRIPEIE 3016
Fly 3017 CCCWSKG-IP--IKDVQSLYINVRNEWGEMFFLRLEIISKD-----------------ATFILLF 3061
Fly 3062 TDARTLPPPIRIDNCSEVVINFSQLRSKPVWITPVRPQSSLSYVMDDPLGQQILLMEAPGGNMI- 3125
Fly 3126 --EFPINNKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHRQLVLGV--RGKKVVIVEKNSGDRS 3186
Fly 3187 QLWLMNSNGQLEHEGSTPPIQTNDANAVRLVLDLEKAPNPMEFTNLVVRTPNKQRVTTQTWRFEN 3251
Fly 3252 GRLMCHANMCVQSRFGESGLKPNYEAVVGRTENRASSSKQIPIGQHIVAQKLRPGSGQLELSTKM 3316
Fly 3317 DGPISTIEICDIKIKQNSVF------------LTPDLLWMHASLNNRQITDKGKVSFVH----EY 3365
Fly 3366 LINVELVKGIGISIIARKPCEEIMFISLDHINCDIVQSALENSLDLNIAYIQI--------DNQL 3422
Fly 3423 LDAVSPI---ALHTQTSNDL--EETQNAVVLKLKMLPSPNKN--AII-----------FKYL--- 3466
Fly 3467 ----------TLDLKP--------------------STASLEEKLILKVASFLGYGKINRQNLSV 3501
Fly 3502 QYQFENTDDKPFLQDMKRYYFENLSIG--ATQVRLSAFTSSKLPVELHET------KKALGLTLI 3558
Fly 3559 KFEDALIELDRYSDKLHFETMDVYRKELKKHYINQVKWHAAAILGSVDFLGNPLGFANDLSEGVS 3623
Fly 3624 GLI------FEGSVKSLVKNVTHGISNSTAKLTETLSDS-----------LGKVVLDDHDNETRQ 3671
Fly 3672 RILELQSNTSG-GHLAAGLKGLGF-GLLGGVTSIVRHTYDGATSDGVPGFLSGLGKGLVGTVTKP 3734
Fly 3735 IIGVLDLASETASAVRETSR-DSHRNAPERKRLPRCVTGAPGGLLPL--YSNRQSKGQQYLYLIN 3796
Fly 3797 Q--KNFSEKII 3805 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 29/110 (26%) |
VPS13 | 147..368 | CDD:318996 | 55/249 (22%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 32/184 (17%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 169/759 (22%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 75/410 (18%) | ||
VPS13 | <3346..3802 | CDD:330393 | 115/550 (21%) | ||
AT5G24740 | NP_001331612.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.020 |