DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13D and Vps13b

DIOPT Version :9

Sequence 1:NP_729825.2 Gene:Vps13D / 39448 FlyBaseID:FBgn0052113 Length:3919 Species:Drosophila melanogaster
Sequence 2:NP_796125.2 Gene:Vps13b / 666173 MGIID:1916380 Length:3993 Species:Mus musculus


Alignment Length:4718 Identity:848/4718 - (17%)
Similarity:1528/4718 - (32%) Gaps:1696/4718 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDAL-RSFNLPVEVTAGSIRKI 64
            ||...:|.:|.:|:.:|::||..:.|.::|..|:|.|..:.::.|.| :...||....:|.|.::
Mouse     1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHIHEL 65

  Fly    65 KLQIPVRQFRTSPWCISIEGLFCII------------CPKNLDNWDYEKEKLQDLEYKLAVLDTA 117
            ::.:|..:..:.|..|:|..:.||:            |..|..|                 ..||
Mouse    66 RIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTN-----------------RSTA 113

  Fly   118 EAGWRSEKGKQMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRF--EDIVDTGKSKICTG 180
            |....|.|.::::....:..:....|..::...:::|:.:.|:::..::  :|||          
Mouse   114 ENTKSSIKPRRIQQAAPADPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV---------- 168

  Fly   181 IKIGSLTAQSCDCDWTNGSYKMNNNEMNYKLVELKELSVYWDLLHEDI--------KCQSYSNQE 237
               .|:...|.:|               |.:.||      ||....||        |..::|:..
Mouse   169 ---LSVNITSAEC---------------YTVGEL------WDRAFMDISATDLVLRKAINFSDCT 209

  Fly   238 I-LEKMHSTCELRSHNFIIKPIC--ATARWKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQR 299
            : |:|.:::.::   .|...|:.  .:.|.:.......:.:|....:....||..:.:.|:. |:
Mouse   210 VCLDKRNASGKI---EFYQDPLLYKCSFRTRLHFTYDNLNSKMPSVIKIHTLVESLKLSITD-QQ 270

  Fly   300 LQMLDKLSEIRQVKEVRQYRLKRPTCTVESNPIAWWKYATICHGFDFKKNEEKWLMLKENLRYML 364
            |.|..::.::                     .||.: |..| ..|...:.|:...:.|:.|..  
Mouse   271 LPMFIRIMQL---------------------GIALY-YGEI-GNFKDGETEDPPCLSKDTLAN-- 310

  Fly   365 LYKSIILNPNENLSAADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNEQGKNMLFHW 429
                  |...|..|..|.::.|..:.               ::::::.:    :..||       
Mouse   311 ------LTGTEEESRIDMQYPAPYKG---------------QELYSQDY----EEPQG------- 343

  Fly   430 FPNWMGW-YANSP---STPNNEQDE------SLKH------LEDDIL-----------------V 461
               |:.| ::..|   |..:.|:|:      |:.|      |:|.|:                 :
Mouse   344 ---WVSWAWSFVPAIVSYDDGEEDDLGTDPASIMHQQKAQTLKDPIVSVGFYCTKATVTFKLTEM 405

  Fly   462 ALENSLQNSSDLKS-----------------------DAVFGHFSIK--LLKGLV-ILQTEDKLN 500
            ..|||..:...:||                       |...|....:  .|||:: :...|:.:|
Mouse   406 QAENSYYSPQKVKSKEVLCWEQEGTTIEALMMGEPFFDCQIGFVGCRAMCLKGILGVKDFEEHMN 470

  Fly   501 DGRNKSMEMQF---NNFSAYLQLSPQLTSYTVGISLQEVYLIDKTSSDTMHNYLIKPQTGNTATP 562
              |:::....|   .|.|            |.|::.....|.|..|.:            |..|.
Mouse   471 --RSETEACFFICGENLS------------TKGLTYLTNSLFDYRSPE------------NNGTR 509

  Fly   563 NQLVKNAALQEDILFQLQYENCNHLRFQLNIKSKGLDLIYNEDAIQWLLDFLADSNSFKYSPRNR 627
            .:.:.:||              :|       |....|:...:....:.:|:|   .:.::|....
Mouse   510 AEFILDAA--------------HH-------KETHTDIAGIQRFGAFYMDYL---YTVEHSSGKG 550

  Fly   628 VAKKTDFMKNWNEMFSGNEVNRKIWMFEIEIFAPRIIFLENYKVSNSLMVLLDFGKLEMR--KME 690
            ...:.||....||...                      :...|.:.||::    |.|:.|  ...
Mouse   551 PTSQQDFPSGKNEDLG----------------------IVQEKSTKSLVI----GPLDCRLDSSA 589

  Fly   691 VKRVIPVIESAVTENTSDDDETY--LTPCSTPPASEKSGSESPTLLENPKTESFLNKNVQLEYVL 753
            |.||:.:|..|:    ..:.|.|  |.|        :|..|..|:|: |:..|.|.:.:...:  
Mouse   590 VHRVLKMIVCAL----EHEYEPYSRLKP--------ESKDEKETVLD-PEEVSSLEEYIPTRH-- 639

  Fly   754 HNKIYDKYLINFTNLQVLVCKYEERWQACLKTSSNFHLIDKFNINLTLEQRNIFTVDPEYPSFML 818
                        |::.:|.|       .|....:.|:|:|                         
Mouse   640 ------------TSVTLLKC-------TCTVFMAEFNLLD------------------------- 660

  Fly   819 FGTCPTILIHGNEELINNCCNIMKPIIKASKEMENIYRGGNTIYASER----IKNLAEDDRSRVV 879
                               |  :.|:|...|...|:....|  :.|.|    |:.|.:.......
Mouse   661 -------------------C--LLPVIMGGKNSSNVTNATN--FQSLRPLPSIQILVDKINLEHS 702

  Fly   880 IEFVMDQLVIEMQSTERSI----------AELQIIGARAGLTKEPHE----------TNISMSVH 924
            :....:|||..:.|..:..          ..|::.|.:||||...|.          .:.|.:::
Mouse   703 VPMYAEQLVHVVSSLNQPSDNLLHYCYVHCYLKVFGFQAGLTCLDHSGSYCLPAPIIPSFSTALY 767

  Fly   925 GLLL-------------------------VDAIQSFGPDFELLVASHRHVGMDSLSGSLKHSAIV 964
            |.||                         :.|.::.....:.:..|..|:|  ::|.|..:.|::
Mouse   768 GKLLKLPALWTKRSQTVVTEGIFELPNLTIQATRAQTLLLQAIYQSWSHIG--NVSSSTVNEALM 830

  Fly   965 S--------------PTSPGSPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIK 1015
            :              ||..||                :||:::     ::|    ||:|:.    
Mouse   831 NEVFPMTGVKSKNPLPTLEGS----------------IQNVEL-----KYC----STSLVK---- 866

  Fly  1016 IVPPNESNSMQLHTTSITFNSLDIIA------NQDTIIEILNFAKRTL-LAQNIFPSES--PES- 1070
                         ..|.|..|:.|.|      .::.:|.:|.....|. |..:.:.:||  ||| 
Mouse   867 -------------CASGTLGSIKICAKAPGDSGKEKLIPLLQGPSDTRDLHSSKWLNESRKPESL 918

  Fly  1071 -PKEATEAPVDVVDQVDHKSHNEIFF----DFFRLNI-LLLYT------IKRDKFNVGRKVGTVT 1123
             ..:.....:.|...:|:..|:...|    ....:|| .:|||      .||...:..::.....
Mouse   919 LAPDLIAFTIQVPQYMDYCHHSGAVFLCSVQGLAVNIDPILYTWVIYQPQKRANRHAQQQPVVAV 983

  Fly  1124 LTEAKINASFQSDLSI----IGSLGGIQVID-----ITSEAFCHPRILSVGRDQILRASDTNKQT 1179
            .....:|...:.:|||    :|.....|..:     |.::.....|.:||....:||.       
Mouse   984 PLVTSVNRRKEDELSIGSAPLGKQQSYQASEYASSPIKTKTVTESRPVSVPVKAVLRV------- 1041

  Fly  1180 VLSQLSNEIYSNNYNEETKSDESDAISFQS-HWSDKTTCTFQMRMASASYTHCPRFLRDVNACIT 1243
                          :||.:|.|.....|.: .|:...:.|.|:               ||.:|..
Mouse  1042 --------------HEECRSPEDKMKEFIAILWNAVKSLTLQL---------------DVQSCCV 1077

  Fly  1244 YFK-------------------RSLREFATSI----------------GNKATDMAKEFVQQV-R 1272
            :..                   ||.....|||                |:|..:..:|....: |
Mouse  1078 FIPNDNLPSPSTIVSGDIPGTVRSWYHGQTSIPGTLVLCLPQIKIISAGHKYMEPLQEIPFVIPR 1142

  Fly  1273 AVEQIGPVYPQRNRQDNW--------LDIIISSPI---IILPISNTSTNVLIANL-------GK- 1318
            .:.:.|..:|       |        :..::...:   ::.|:..|||..:.:..       |: 
Mouse  1143 PILEEGDAFP-------WTISLHHFSIYTLLGKQVTLSLVEPMGCTSTLAVTSQKLLPVGPDGRH 1200

  Fly  1319 --ISC------SNAVKCDSDEFNESYTIEIKNTYVYSLNIDEGEYS-FNVHPAKNKDAIP----- 1369
              :.|      |..:||.:.:....|.:....:.|:|.....|..| .:|:|......||     
Mouse  1201 SFVVCLHVDLESLEIKCSNPQVQLIYELADTMSKVWSKIQKRGNLSPSSVYPETVAGPIPGSPVW 1265

  Fly  1370 --------------ILHDTAITLQ---LYAG----YSDDNDEDKQLNRFSIKGSMVEALKVSLNR 1413
                          ...|...|.:   :.||    :||....::..:  :|.||   :.:||| .
Mouse  1266 SSVGTAPPDTSTCSPSADIGTTTEGDSVQAGDDSPFSDSVTLEQTTS--NIGGS---SGRVSL-W 1324

  Fly  1414 KQYELLLESIRYATNFSNEVLNESDELDQNGDIEP-TANIDAESIISTTIQFSVPVFQIN----- 1472
            .|:.|...:::.   |:.::..:..|:....::|. :|:||.:.:. |.::..|..|.|:     
Mouse  1325 MQWVLPKATVKL---FAPDLEKKGTEVCMVSELEDLSASIDVQDVY-TKVKCKVESFSIDHYQSR 1385

  Fly  1473 --------------LQ---------------NEYHNDLINLTFKNF---NVKH------------ 1493
                          ||               ::.|. .::||:...   ||:|            
Mouse  1386 PGEGWQSGHFEGVFLQCKEKPVTTTKLLDGAHQQHG-FLSLTYTKAVTKNVRHKLTSRNERRSFY 1449

  Fly  1494 -ISKGFDKDVEVVLKSVLMEDLKSDLT--SPFRNMVTSVDLEQKIKKNEMTSSSCPDLPSYCNSL 1555
             :|:|........|..:|:.....|:.  .|..|.:.|| ...|:.|.:.........|...::|
Mouse  1450 KLSEGLMDGSPHFLHEILLSAQAFDIVVCFPLLNAIASV-FHTKLPKTQREKRKSSGQPMRTHTL 1513

  Fly  1556 KNRSSSVPSCFYNHMQVKVFGGDQKYTSSN--KNELGKKKESQTLVIYKSHTGRSAQN--GKLEQ 1616
            .:|  ::|..:.|...:::|....:.|.|.  .|: ..|:::..|.:........|.|  |:...
Mouse  1514 TSR--NLPLIYINTSVIRIFVPQTEETQSTVAVNQ-AAKEDTMVLKVGSIAMAPQADNPLGRSVL 1575

  Fly  1617 TSSIQFNCLNLAI-------CVERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKHIDKVCSKLKVS 1674
            ...|....|||.|       ..:|.|.|    .|.|: |:.....:::| .||.........:..
Mouse  1576 RKDIYQKALNLGILRDPGSEIEDRQYQI----DLQSI-NIGTAQWDQLK-PEKGSGSGGVPTESE 1634

  Fly  1675 IRSFNFTLIRN-ESLLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLTKYGNIYKQKFLTSGT 1738
            ..|.|..|..| .|.:.|.....|:...:...:|..:.|. .::....:....|::.::.|..|.
Mouse  1635 RNSQNPALEWNMASSIQRHQERRAILTPILTDFSVRITGA-PAIIFTKIISQENLHMEEILVCGH 1698

  Fly  1739 EALNFVYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTKRFSTELHVFVKDLLQLQTPVIRKLKK 1803
                        .||...|.:.|..|  :::.|..:|        .:.|.::..|: |..:..:.
Mouse  1699 ------------SLEVNITTNLDFFL--SVAQVQLLH--------QLIVANMTGLE-PSTKATEI 1740

  Fly  1804 HGSEQNMRPSKMKLVIQADSPVIVLPSSYNRNEVIIAYLGQFSLKNSFHFASDNNIISKMSATPS 1868
            ...||       |.|...|.......|.|:.                   |.|:.|.|       
Mouse  1741 SKQEQ-------KKVDTFDGGTAETSSRYSG-------------------AQDSGIGS------- 1772

  Fly  1869 KDEILDVMRIDLVNINLFSGERSSMKAKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLERNL 1933
                 |.::|.:|.|..:||......|:...:..  |:.::||:    ||               
Mouse  1773 -----DSVKIRIVQIEQYSGASQHRIARPSHQSS--IVKNLNFI----PF--------------- 1811

  Fly  1934 SADAHRVCPDISVQGTFSKLS----GIINIQQYKLI---------RSFLNNNIGEQTDDIYMNYH 1985
                     ||.:  |.|::|    ..:.:.::||.         |:||  |:.|...|:..  .
Mouse  1812 ---------DIFI--TASRISLMTYSSVALPKFKLPEQKEDGKTGRTFL--NLAEVDSDVAK--P 1861

  Fly  1986 NNSCTSI----ERLSTINLMPKNEVSKIVSI-------------LISIRILLE---------DVS 2024
            |.:|.|:    :.||:.......:..:::|:             .:.:.::.:         ::.
Mouse  1862 NQACVSMVTAEDPLSSSTSFSSGKKVRVLSLESLHASTRSSARQALGVTVVRQPGRRGTGDLELD 1926

  Fly  2025 LLLALNTSQSAAIEPLACIHFLKSTLEIDLFSDGSQDIDL--ISSNILIVDE-RNESDKSNENVF 2086
            |.|.|..||.:.:  |:| |..|..:|:.:|     |..|  :.|:....|. :...:.|:.|:.
Mouse  1927 LFLHLIVSQPSLL--LSC-HHRKQRVEVSIF-----DAMLKGVPSDYTCTDPGKTLPEASDYNIV 1983

  Fly  2087 -----------KNILEPSKKEVRIEN------SVQVEVHCRKKATFSKYTIMLNNMRVFALLSF- 2133
                       |:.:.||...:.|::      .:.::|....||.                ||| 
Mouse  1984 WLQTVPGETDSKSGIPPSLVTLHIKDFLNGPADIYLDVSKPLKAN----------------LSFT 2032

  Fly  2134 -LDQLKSYLQ------------------------EDSPAP-----------VVNNAANQIAQKPQ 2162
             |||:..:|:                        ::.|.|           |..:.|.:.:.:..
Mouse  2033 KLDQINHFLKKIKKAHSSAHSKETSTPSDSILNMDEPPVPKCYRGKLSKTKVHCDEAQKTSFQEN 2097

  Fly  2163 IDTSISTEYVVNITDSEIIFAEE--------C-----SRLDSNA--------------------- 2193
            |..:||....|::..::|:.:.|        |     |.|:.:.                     
Mouse  2098 IWRAISCFQKVSVHTTQIVVSMETVPHPHKPCVLASLSNLNGSLTVKAAQKVPGASLGSSFLLSI 2162

  Fly  2194 --IILKSTTVICYKPNSNIV--PLSLDINHLEIFSCTLDAEEESALSIIDPFTLIIELRSNCLNI 2254
              ::||::    .|..|.|:  |.|..:| ||...|..........||  | .:.::||...|.:
Mouse  2163 HDVLLKTS----LKERSRILIGPFSATVN-LEAKWCKHSGNPGPQQSI--P-KISMDLRGGLLQV 2219

  Fly  2255 LI-QKHLN-IRLSYVDVKLFS-------------RMARLLPTQTSRPKNVISKADSD-------- 2296
            .. |:||| :.|.:   :||:             ..|..:|:...:.:...::..||        
Mouse  2220 FWGQEHLNCLALLH---ELFNGYLQEGKSEMPVPESAPQMPSPVEKTQAFKTEQSSDDLRTGIFQ 2281

  Fly  2297 -LEKAAPLVAMGFEISDCLYAMQINN------WRIND----AAIWLSQQKQNTYRNPALEMKTA- 2349
             ::.|..|...|  :.:.|:..:...      ||..:    ..:.::....||..:|  ::.|| 
Mouse  2282 YVQDAESLKLPG--VYEVLFYNETEESPGMMLWRYPEPRVLTLVRITPVPFNTTEDP--DISTAD 2342

  Fly  2350 ---------------------------------VVDASLISVFIIDDCMDADVPLLEVSLSKFLL 2381
                                             |.:..|..:.::.|    ...|:...|.:.:|
Mouse  2343 LGDVLQVPCGLEYWDELQKVFVAFQEFSLSESKVCELQLPDINLVHD----QKKLVSSDLWRIVL 2403

  Fly  2382 NFTFQTQDPNPKETNIRHYSLGN-IDTEVSVNYYNRRLSGWEPVAETW----------ESNLNWK 2435
            |....|.|.....:.....|... :.|..::....|..|.:.|    |          .::|.::
Mouse  2404 NNNQNTTDDQSSASESGSQSTCEPLVTPTALAACTRVDSCFTP----WFVPSLCMSFQFAHLEFR 2464

  Fly  2436 YTKGHLDNKKRFEIGISSKQMLK-----LNVTSTFIELFHMV---------LKNWTN-------- 2478
            ... |||     ::|.:|.|.|:     .||.|   ||.:|:         |:.|.:        
Mouse  2465 LCH-HLD-----QLGTASPQYLQPFISDKNVPS---ELEYMIISFREPNLHLRQWNSGPVCQEIK 2520

  Fly  2479 -----DFNDNGAKNFRQRSPFIPFAL-----------QNLSGTPLLFKPIYAPLGDLTRSDLQQV 2527
                 |......:|...::...||.:           |.|..:.::...:....|......|...
Mouse  2521 FSSQMDCKLLECRNVTMQTVVKPFGICGQMALSSDGVQKLLDSTVIVDSVLVNFGQHVVHSLNTA 2585

  Fly  2528 -------------ELIKNWYSVQPNETKTFDFSQKSK-----LRHVHSHQLN---------LHQI 2565
                         ||:.:.:.:..:..:|..|.|...     |..:||||.:         ||  
Mouse  2586 IQAWQQNKCPEVEELVFSHFVICNDTQETLRFGQVDTDENILLASLHSHQYSWRSHKSPQLLH-- 2648

  Fly  2566 FVQIHGWTLIG------PISVDKVGMFFRTTKLDSQFLTKSRIVFDISLIGSAQKLIKVKSSLGV 2624
             :.|.||   |      |.:||..|.|.||.:...:   .:.::..:..:...||.|.:.....:
Mouse  2649 -ICIEGW---GNWRWSEPFTVDHAGTFIRTIQYKGR---TASLIIKVRALSGVQKQIIICGRQII 2706

  Fly  2625 INKLDRNVFLKMTLKGTHSDGLSSISVIKPN-DELSVPLKFIDASLYVAHNTSESDAYEDTGFSN 2688
            .:.|.:::.||:.   .|..|....:|::.: |.|:...|.   ..|:..|             |
Mouse  2707 CSYLSQSIELKVV---QHYIGQDGQAVVREHFDCLTAKQKL---PSYILEN-------------N 2752

  Fly  2689 E--EILWKACGKDD-TRQL-----LAGYDT-------NKSILYTFVNISREIYHCKEQNLPGHKI 2738
            |  |:..||.|.:| :|.:     .:.|.|       |.||:|.:..:                :
Mouse  2753 ELTELCVKAKGDEDWSRDVCLEPKASEYSTVIQVPTSNSSIIYVWCTV----------------L 2801

  Fly  2739 TLLPPLKINNMLCCDLMFKIHEHATGRINSSESVNIYNVNICQPLNLSITLDNFQLSGQLKIPVS 2803
            ||.|..::...:.                           :..||        |.:...|..|: 
Mouse  2802 TLEPNSQVQQRMI---------------------------VFSPL--------FIMRSHLPDPI- 2830

  Fly  2804 HRGVIEPKLKLIDIQKRELHVRVSIQSVPGKGMELYISAPVWIINKTGLPLIYKQEGTSHTAAGQ 2868
                      :|.::||.|.:. ..|.:||:|.|              .||...:....|....|
Mouse  2831 ----------IIHLEKRSLGLS-ETQIIPGRGQE--------------NPLQNVEPDLVHHLTFQ 2870

  Fly  2869 F-EEHETARQVAPLMFSFSDQEGSPALVLR--------------LGKAYGSNN----MWCKSFST 2914
            . ||::.:....|:         |.||:.:              |.:.||...    .|..|   
Mouse  2871 AREEYDPSDCAVPI---------STALIKQIATKIQPGGTVNEMLDEFYGPEKSQEPTWPYS--- 2923

  Fly  2915 HKDLADRDLRAENTKGSYAIGISVRRGRGLYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNYD 2979
            :|| :||:.:.........:.:|:.:.   |..|..:.|.|...|.|:|.:.|...:...||.  
Mouse  2924 NKD-SDRNEQLSQWDSPMRVKLSIWKP---YVRTLLIELLPWALLINQSKWDLWLFEGEKIVL-- 2982

  Fly  2980 RPDPRKIISAPVDCNF--AF----HWPNWDQEQIICVRIPEIECCCWSKGIPIKDVQSLYINVRN 3038
            :....|||..|   ||  ||    :|.|.:...               |.:.||.|.:|   ...
Mouse  2983 QVPAGKIIIPP---NFQEAFQIGIYWENTNTVH---------------KTLAIKLVHNL---TSP 3026

  Fly  3039 EW-----GEMFFLRLEIISKDATFILLFTDARTLPPPIR--------------IDNCSEVVINFS 3084
            :|     ||:..|..|          .|.||.     ||              |.:..:..|...
Mouse  3027 KWKDGGNGEVVTLDEE----------AFVDAE-----IRLGAFPGHQKLCQFCISSMVQHGIQVI 3076

  Fly  3085 QLRSKPVWI--TP----VRPQSSLS---------YVMDDPLGQQILLMEAPGGNMIEFPINNKNN 3134
            |:..|...|  ||    .:|..::|         :|.|     .......|||   |.|....::
Mouse  3077 QIEDKTTVINNTPYQIVYKPHLAISNSYSGKEHCHVPD-----SATFSICPGG---EHPAVRSSS 3133

  Fly  3135 IKKTLTYTNFIYIAFQGTFERSNEEENT---HRQLVLG---VRGKKVVIVEKNSGDRSQLWLMNS 3193
            :.           .:..|....:.|.:|   .:|::||   |.|          .|.:|.|.:.:
Mouse  3134 LP-----------CWDVTPAVGSSELDTATLQKQILLGFSPVPG----------ADSAQCWSLPA 3177

  Fly  3194 --NGQLEHEGSTPPIQTNDAN-----AVRLV---------LDLEKAPNPMEFTNLVVRTPNKQRV 3242
              .|:...:....|..|...|     |:.|.         :.|.:.|:|                
Mouse  3178 IIGGEFPRQSVAVPFGTGRENGFCTRAIALTYQEHLGVTYITLSEDPSP---------------- 3226

  Fly  3243 TTQTWRFENGRLMCHANMCVQSRFGESGLK--PNYEAVVGRTENRASSSKQIPIGQHIVAQKLRP 3305
                      |::.| |.|......:..::  |.::                     :..:|:.|
Mouse  3227 ----------RVVFH-NRCPVPMLMKENIRDIPKFD---------------------VYCKKIPP 3259

  Fly  3306 GSGQLELSTKMDGPISTIEICDIKIKQNSVFLTPDLL------WMHASLNNRQITDKGKVSFVHE 3364
            .|   .:..::...|.:...|..|....|:||..|.:      |......|.|.|          
Mouse  3260 ES---SVHHELYHQIISYPDCKTKDLLPSLFLRIDSMEEMTAEWSDPVDINSQGT---------- 3311

  Fly  3365 YLINVELVKGIG-ISIIARKPCEEIMFISLDHINCDIVQSALENSLDLNIAYIQIDNQLLDAVSP 3428
               .|..:.|.| :.:...:.|..:..|.........:.::...:|:..:.:.....||..|||.
Mouse  3312 ---QVVFLTGFGYVYVDIAQQCGTVFIILAPEGKAGPIFTSTSRALERMVTFRMFITQLSLAVSD 3373

  Fly  3429 IALHTQTSNDLEETQNAVVLKLKMLPS-------P-----------------------NKNAIIF 3463
            ...|...|..|..|.:.|.|.:..:|:       |                       ||:...|
Mouse  3374 DLTHQAPSELLRLTLDNVFLHVSPVPALLPGEEPPSSFFQLYGVEVYCGDLQLDNQLYNKSNFHF 3438

  Fly  3464 KYLTL--------------DLKPSTASLEE-------KLILKVASFLGYGKINRQNLSVQYQFEN 3507
            ..|..              .|..|:.:|||       ||.|.|:.    ||....::| ::.||.
Mouse  3439 AVLVCQGERTDPAQYSRVQSLLVSSKALEEYKENCFIKLCLTVSE----GKDILLDVS-EFTFEL 3498

  Fly  3508 TDDKPFLQDMKRYYFENL-SIGATQVRLSA-----FTSSK-LPVELHETKKALGLTLIKFEDALI 3565
            ...:.:::|...||.:.| .......|:|.     ||..: |||::.:..||| :..:|....||
Mouse  3499 KPARLYVEDTFVYYIKTLFDTYLPPSRMSGHHAQLFTGQQVLPVQVTQHAKAL-VNAVKLRKLLI 3562

  Fly  3566 E-----------LDRYSDKLH-------FETMDVYR------KELKKHYINQVKWHAAAILGSVD 3606
            :           |..|....|       ||...|:.      ..|..||.....:.|..::||::
Mouse  3563 QPVNLLISIHASLKLYIASDHTPLSFSVFERGPVFTTARQLVHALAMHYAAGALFRAGWVVGSLE 3627

  Fly  3607 FLGNPLGFANDLSEGVSG---LIFEGSVK--------------SLVKNVTHGISNSTAKLTETLS 3654
            .||:|......:..|:|.   |.:||..:              |.||:::.|...|...|..:|:
Mouse  3628 ILGSPASLVRSIGNGISDFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGALTSITNLATSLA 3692

  Fly  3655 DSLGKVVLD-DHDN---ETRQRILELQSNTSGGHLAAGLKGLGFGLLGGVTSIV-------RHTY 3708
            .::|::.|| :|.|   |.|:::.|    :.|..|..||..||..|||.:..||       :.|.
Mouse  3693 RNMGRLSLDEEHYNRQEEWRRQLPE----SLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTS 3753

  Fly  3709 DGATSDG--VPGFLSGLGKGLVGTVTKPIIGVLDLASETASAVRETSRDSHRNAPERKRLPRCVT 3771
            :...|.|  ..|.:||:|||::|..||||.|..:|.|:|...:                    :.
Mouse  3754 ETQASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGI--------------------LH 3798

  Fly  3772 GAPGGLLPLYSNRQSKGQQYLYLINQKNFSEKIISYEPNLW----------------------SD 3814
            ||....||    :|.....:||.....|      |:...:|                      |.
Mouse  3799 GAGLSQLP----KQRCQPTHLYADQAPN------SHVKYVWKMLQSLGRPEVHMALDVVLVRGSG 3853

  Fly  3815 KEARLRLLVSTEYVRIFSLSDANPTIMFECHVSEILSC 3852
            :|....||:::|.:.:.|:|:......|.  ::|| ||
Mouse  3854 QEHEGCLLLTSEVLFVVSISEDTQQQAFP--ITEI-SC 3888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13DNP_729825.2 Chorein_N 4..112 CDD:315323 26/120 (22%)
VPS13 147..368 CDD:318996 37/233 (16%)
VPS13_mid_rpt <656..837 CDD:318998 29/184 (16%)
VPS13 <2039..>2694 CDD:330393 157/902 (17%)
SHR-BD 2836..3113 CDD:310922 67/335 (20%)
VPS13 <3346..3802 CDD:330393 129/568 (23%)
Vps13bNP_796125.2 Chorein_N 3..102 CDD:315323 23/98 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..133 8/49 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1262..1303 4/40 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1616..1637 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1735..1770 9/60 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2048..2067 0/18 (0%)
SHR-BD <2605..>2685 CDD:310922 21/88 (24%)
VPS13_C 3557..3703 CDD:318997 32/145 (22%)
ATG_C 3705..3809 CDD:312735 37/131 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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