Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001919988.5 | Gene: | vps13d / 567879 | ZFINID: | ZDB-GENE-050912-1 | Length: | 4386 | Species: | Danio rerio |
Alignment Length: | 4598 | Identity: | 1300/4598 - (28%) |
---|---|---|---|
Similarity: | 2101/4598 - (45%) | Gaps: | 911/4598 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
Fly 66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLDTAEAGWRSEKGKQME 130
Fly 131 SYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQSCDCDW 195
Fly 196 TNGSYKMNNNEMNYKLVELKELSVYWDLLHEDIKCQSYSNQEILEKMHSTCELRSHNFIIKPICA 260
Fly 261 TARWKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQRLQMLDKLSEIRQVKEVRQYRLKRPTC 325
Fly 326 TVESNPIAWWKYATIC----------HG-FDFKKNEEKWLMLKENLRYMLLYKSIILNPNENLSA 379
Fly 380 ADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNEQGKNM------------------- 425
Fly 426 ---------LFHWFPNWMGWYANSPSTPNNE--QDESLKHL--------EDDILVALENSLQNSS 471
Fly 472 DLKSDAVFGHFSIKLLKGLVILQTEDKLNDGRNKSM-------EMQFNNFSAYLQLSPQLTSYTV 529
Fly 530 GISLQEVYLIDKTSSDTMHNYLIKP--------------QTGNT--ATPNQLVKNAALQEDILFQ 578
Fly 579 LQYENCNHLRF----QLNIKSKGLDLIYNEDAIQWLLDFL----ADSNSFKYSP--RNRVAK--- 630
Fly 631 ----------KTDFMKNWNEMFSGNEV-NRKIWMFEIEIFAPRIIFLENYKVSNSLMVLLDFGKL 684
Fly 685 ------EMRKMEVKRVIPVIESAVTENTSDDDETYLTPCSTPPAS-------EKSGSESPTLLEN 736
Fly 737 PKTESFLNKNVQLEYVLHNKIYDKYLINFTNLQVLVCKYEERWQACLKTS-SNFHLIDKFNINLT 800
Fly 801 LEQRNIFTVDPEYPSFMLFGTCPTILIH-------------------GNEELINNCCNIMKPIIK 846
Fly 847 ASKEMENIYR--------GGNTIYASERIKNLAEDDRSRVV------IEFVMDQLVIEMQSTERS 897
Fly 898 IAELQIIGARAGLTKEPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSLSGSLKHSA 962
Fly 963 IVSPTSPG--SPNF--FDRATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIKIVP---PN 1020
Fly 1021 ESNSMQLHTTSITFNSLDIIANQDTIIEILNFAKRTLLAQNIFPSESPESPKEATEAPVDVVDQV 1085
Fly 1086 DHKS----HNEIFFDFFRLNILLLYTIKRDKF----NVGRKVGTVTLTEAKINASFQSDLSIIGS 1142
Fly 1143 LGGIQVIDITSEAFCHPRILSVGRDQILRASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISF 1207
Fly 1208 QSHWSDKTTCTFQMRMASASYTHCPRFLRDV----NACITYFKRSLREFATSIGNKATDMAKEFV 1268
Fly 1269 QQVRAVEQIGPVYP----QRNRQDNW---------------------------LDIIISSPIIIL 1302
Fly 1303 PISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEIKNTYVYSLNIDE--------------- 1352
Fly 1353 -------GEYSFNVHPAKNKD---------AIPILHDTAITLQLYAGYSDDN--------DEDKQ 1393
Fly 1394 -LNRFSIKGSMVEALKVSLNRKQYELLLESIRYATNFSNEVLNESDEL----------------- 1440
Fly 1441 -----DQNGDI---EPTANIDAESIISTTIQFSVPV------------------FQIN-LQNEYH 1478
Fly 1479 ND-------LINLTFKNFNVKHISKGFDKD------VEVVLKSVLMED-LKSDLTSPFRNMVTS- 1528
Fly 1529 -VDLEQKIKKNEMTSSSCP------------DLPSYCNSLKN------RSSSVPSCFYNHMQVKV 1574
Fly 1575 FGGDQKYTSSNKNELGKKKESQ------------------------------TLVIYKSHTGRSA 1609
Fly 1610 QNGKLEQTSSIQFNCLNLAICVERWYTIFDFFGLVSVDN-------------VNEKYPEEMKL-- 1659
Fly 1660 -------VEKHIDKVCSKLKVSIRSFNFTLIRNESLLSRVNVSNAVFMILQDPYSKIVEGCLGSV 1717
Fly 1718 SVNDLTKYGNIYKQKFLTSGTEALNF-VYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTKRFST 1781
Fly 1782 ELHVFVKDLLQLQTPVIR-KLKKHGS---EQNMRPSKMKLVIQADSPVIVLPSSYNRNEVIIAYL 1842
Fly 1843 GQFSLKNSF--------------------HFASDNNIISKMSAT--------------PS----- 1868
Fly 1869 -------KDEI--LDVMRIDLVNINLFSGERSSMK----AKADQEKDRIIIADMNFLRLGQPFFN 1920
Fly 1921 ESCFLHLQLERNLSADAHRVCPDISVQGTFSKLSGIINIQQYKLIRSFLNNNIGEQTDDIYMNYH 1985
Fly 1986 NNSCTSIERLSTINLMPKNEVSKIVSILISIRILLEDVSLLLALNTSQSAAIEPLACIHFLKSTL 2050
Fly 2051 EIDLFSDGSQDIDLISSNILIVDER----NESDKSNENVFKNILEPSKKEVRIENSVQVEVHCRK 2111
Fly 2112 KATFSKYTIMLNNMRVFALLSFLDQLKSYLQ---EDSPAP------------------------- 2148
Fly 2149 --VVNNAANQIAQKPQIDTSISTEYVVNITDSEIIFAEECSRLDSNAIILKSTTVICYKPNSNIV 2211
Fly 2212 PLSLDINHLEIFSCTLDAEEESALSIIDPFTLIIELRS-----------NCLNI-----LIQ--- 2257
Fly 2258 KHLNIRLSYVDVKLFSRMARLLPTQTS-RPKNVISKADSDLEKAAP------------------- 2302
Fly 2303 -----LVAMGFEISDCLYAMQINNWRINDAAIWL----------SQQKQNTYRNPALEMKTAVVD 2352
Fly 2353 ASLISVFIIDDCMDADVPLLEVSLSK-FLLNFTFQTQDPNPKETNIRHYSLGNIDTEVSVNYYNR 2416
Fly 2417 RLSGWEPVAETWESNLNW-KYTKGHLDNKKRFEIGISSKQMLKLNVTSTFIELFHMVLKNWTNDF 2480
Fly 2481 --NDNGA-------------------------------------------------KNFRQRSPF 2494
Fly 2495 IPFALQNLSGTPLLF-----KPIYAPLGDLTRSD---------LQQVELIKNWYSVQPNETKTFD 2545
Fly 2546 FSQKSKLRHVHSHQLNLHQIFVQIHGWTLIGPISVDKVGMFFRTTKLDS---------------- 2594
Fly 2595 -------QFLTKSRIVFDISLIGSAQKLIKVKSSLGVINKLDRNVFLKMTLKGTHS-DGLSSISV 2651
Fly 2652 IKPNDELSVPLKFIDASLYVAHNTSESDAYEDTG----FSNEEILWKACGK----DDTRQLLAGY 2708
Fly 2709 DTNKSILYTF---VNISREIYHCKEQ---------------NLPGHKITLLPPLKINNMLCCDLM 2755
Fly 2756 FKIH-EHATGRINSSESVNIYNVNICQPLNLSITLDNFQLSGQLKIPVSHRGVIEPKLKLIDIQK 2819
Fly 2820 RELHVRVSIQSVPGKGMELYISAPVWIINKTGLPLIYKQEGTSHTAAGQFEEHETARQVAPLMFS 2884
Fly 2885 FSDQEGSPALVLRLGKAYGSNNM--WCKSFSTHKDLADRDLRA---ENTKG-SYAIGISVRRGRG 2943
Fly 2944 LYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNYDRPDPRKIISAPVDCNFAFHWPNWDQEQII 3008
Fly 3009 CVRIPEIECCCWSKGIPIKDVQSLYINVRNEWGEMFFLRLEIISKDATFILLFTDARTLPPPIRI 3073
Fly 3074 DNCSEVVINFSQLRSKPVWI-TPVRPQSSLSYVMDDPLGQQILLMEAPGGNMIE-------FPIN 3130
Fly 3131 NKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHR-------QLVLGVRGK--KVVIVEKNSGDRS 3186
Fly 3187 QLWLMNSNGQLEHEGSTPPIQTNDAN----AVRLVLDLE--KAPNPMEFTNLVVRTPNKQRVTTQ 3245
Fly 3246 TWRFENGRLMCH-ANMCVQSRFGESGLKPNYEAVVGRTENRASSSKQIPIGQHIVAQKLRPGSGQ 3309
Fly 3310 LELSTKMDGPISTIEICDI---KIKQNSVFLTPDLLWMHASLNNRQITDKGKVSFVHEYL-INVE 3370
Fly 3371 LVKGIGISIIARKPCEEIMFISLDHINCDIVQSALENSLDLNIAYIQIDNQLLDAVSPIAL-HTQ 3434
Fly 3435 TSNDLEETQNAVVLKLKMLPSPNKNAI--IFKYLTLDLKPSTASLEEKLILKVASFLGYGKINRQ 3497
Fly 3498 NLSVQYQ-FENTDDKPFLQDMKRYYFENLSIGATQVRLSAFTSSKLPVELHETKKALGLTLIKFE 3561
Fly 3562 DALIELDRYSDKLHFETMDVYRKELKKHYINQVKWHAAAILGSVDFLGNPLGFANDLSEGVSGLI 3626
Fly 3627 FEGSVKSLVKNVTHGISNSTAKLTETLSDSLGKVVLDDHDNETRQRILELQSNTSGGHLAAGLKG 3691
Fly 3692 LGFGLLGGVTSIVRHTYDGA-TSDGVPGFLSGLGKGLVGTVTKPIIGVLDLASETASAVRETSRD 3755
Fly 3756 SHRNAPERKRLPRCVTGAPGGLLPLYSNRQSKGQQYLYLINQKNFSEKIISYE------------ 3808
Fly 3809 ------PNLWSDKEARLRLLVSTEYVRIFSLSDANPTIMFECHVSEILSCHPVVTNAGTTPTTSS 3867
Fly 3868 RASASHYIEISTNLPKITRPRIRCRSEECAEAASRCINYAKSVFDERE 3915 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 58/107 (54%) |
VPS13 | 147..368 | CDD:318996 | 64/231 (28%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 55/213 (26%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 234/837 (28%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 115/283 (41%) | ||
VPS13 | <3346..3802 | CDD:330393 | 185/461 (40%) | ||
vps13d | XP_001919988.5 | Chorein_N | 3..112 | CDD:315323 | 58/108 (54%) |
VPS13 | 139..358 | CDD:318996 | 64/228 (28%) | ||
VPS13_mid_rpt | 615..889 | CDD:318998 | 74/290 (26%) | ||
UBA_VP13D | 2650..2685 | CDD:270491 | 10/34 (29%) | ||
SHR-BD | 3285..3568 | CDD:310922 | 115/282 (41%) | ||
VPS13 | <3762..4287 | CDD:330393 | 205/545 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170583933 | |
Domainoid | 1 | 1.000 | 449 | 1.000 | Domainoid score | I493 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1796 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H15583 | |
Inparanoid | 1 | 1.050 | 1345 | 1.000 | Inparanoid score | I133 |
OMA | 1 | 1.010 | - | - | QHG50136 | |
OrthoDB | 1 | 1.010 | - | - | D10953at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006123 | |
OrthoInspector | 1 | 1.000 | - | - | otm26508 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106938 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR16166 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X4414 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.890 |