Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_056193.2 | Gene: | VPS13D / 55187 | HGNCID: | 23595 | Length: | 4388 | Species: | Homo sapiens |
Alignment Length: | 4531 | Identity: | 1333/4531 - (29%) |
---|---|---|---|
Similarity: | 2149/4531 - (47%) | Gaps: | 775/4531 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
Fly 66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLDTAEAGWRSEKGKQME 130
Fly 131 SYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQSCDCDW 195
Fly 196 TNGSYKMNNNEMNYKLVELKELSVYWDLLHEDIKCQ---SYSNQEILEKMHSTCELRSHNFIIKP 257
Fly 258 ICATARWKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQRLQMLDKLSEIRQVKEVRQYRLKR 322
Fly 323 PTCTVESNPIAWWKYATICHGFDFKKNEEK--WLMLKENLRYMLLYKSIILNPNEN--LSAADKE 383
Fly 384 FKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNEQ----------------GKNMLFH---W 429
Fly 430 FPNWMGWYANSPSTPNNEQDESL------KHLEDDILVALENSLQNSSD-------LKSDAVFGH 481
Fly 482 FSIKLLKGLVILQTEDKLNDGRNKS--MEMQFNNFSAYLQLSPQLTSYTVGISLQEVYLIDKTSS 544
Fly 545 DTMHNYLIKP----QTGNTATPNQLVKNAALQED---------ILFQLQYE-NCNHLRFQ--LNI 593
Fly 594 KSKGLDLIYNEDAIQWLLDFL----ADSNSFKYSP--RNRVAK-------------KTDFMKNWN 639
Fly 640 EMFSGNEVNR-KIWMFEIEIFAPRIIFLENYKVSNSLMVLLDFGKLEMRKMEVKRVIPVIESAVT 703
Fly 704 ENTSDDDETYLTPCSTPP------ASEKSGSESPTLLENPKTESFLNKNVQLEYVLHNKIYDKYL 762
Fly 763 INFTNLQVLVCKYEERWQACLKTS-SNFHLIDKFNINLTLEQRNIFTVDPEYPSFMLFGTCPTIL 826
Fly 827 IHGNEELIN---NCCNIM-KPIIKASKEM--ENIY-----RGGNTIYASERIKNLAE-----DDR 875
Fly 876 SRVVI--------EFVMDQLVIEMQSTERSIAELQIIGARAGLTKEPHETNISMSVHGLLLVDAI 932
Fly 933 QSFGPDFELLVASHRHVGMDSLSGSLKHSAIVSPTS-PGSPNFFDRATSPHMITKAVQNIKMGDR 996
Fly 997 S-TEFCDD----EDSTALISVDIKIVPPNESNSMQLHTT----SITFNSLDIIANQDTIIEILNF 1052
Fly 1053 AKRTLLAQNIFPSESPE-SPKE-ATEAPVDVVDQVDHKS----HNEIFFDFFRLNILLLYTI--- 1108
Fly 1109 KRDKFNVGRKVGTVTLTEAKINASFQSDLSIIGSLGGIQVIDITSEAFCHPRILSVGRDQILRAS 1173
Fly 1174 DTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMRMASASYTHCPRFLRDV 1238
Fly 1239 NACITYFKRSLREFATSIGNKATDM----AKEFVQQVRAVEQIGPVYPQRNR-----QDN----- 1289
Fly 1290 ------------WLDIIISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEIKN 1342
Fly 1343 TYVYSLNI----------DEGEYSF-------------NVHPAKNK--------DAIPILHDTAI 1376
Fly 1377 TLQL---------YAGYSDDNDEDKQLNRFSIKGSMVEALKVSLNRKQYELLLESI--------- 1423
Fly 1424 -RYATNFSNEVLNESD------------ELDQNGDIEPTANIDAESIISTTIQFSVPVFQI---- 1471
Fly 1472 ---------NLQNEYHND-------LINLTFKNFNVKHISKGFDKD------VEVVLKSVLMED- 1513
Fly 1514 LKSDLTSPFRNMVTS--VDLEQKIKKNEMTSSSCP-----DLPSYCNSLKNRSSSVPSCFYNHMQ 1571
Fly 1572 VKVFGGDQKYTSSNKNE-------------------------LGKKKESQTLV------IYKSHT 1605
Fly 1606 GRSAQNGKLEQTSSIQFNCLNLAICVERWYTIFDFFGLVS-VDNVNEKYPEE-----MKLVEKHI 1664
Fly 1665 -------DKVCSKLKVSIRSFNFTLIRNESLLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDL 1722
Fly 1723 TKYGNIYKQKFLTSGTEAL---NFVYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTKRFSTELH 1784
Fly 1785 VFVKDLLQLQTPVIR-KLKKHGS---EQNMRPSKMKLVIQADSPVIVLPSSYNRNEVIIAYLGQF 1845
Fly 1846 SLKNSFHFASDNNIISKM------SATPS------------------------------------ 1868
Fly 1869 -KDE------------------------------ILDVMRIDLVNINLFSGERSSMK-AKADQEK 1901
Fly 1902 DRIIIADMNFLR-LGQPFFNESCFLHLQLERNLSADAHRVCPDISVQGTFSKLSGIINIQQYKLI 1965
Fly 1966 RSFLNNNIGEQTDDIYMNYHNNSCTSIERLSTINLMPKNEVSKIVSILISIRILLEDVSLLLALN 2030
Fly 2031 TSQSAAIEPLACIHFLKSTLEIDLFSDGSQDIDLISSNILIVDERNESDKSN---ENVFKNILEP 2092
Fly 2093 SKKEVRIENSVQVEVHCRKKATFSKYTIMLNNMRVFALLSFLDQLKSYLQEDSPAPVVN------ 2151
Fly 2152 --NAANQIAQKPQ-IDTSIST-------------EYVVNITDSEIIFAEECSRLDSNAIILKSTT 2200
Fly 2201 VICYKPNSNIVPLSLDINHLEIFSCTLDAEEESALSIIDPFTLIIELRSN--------------- 2250
Fly 2251 -----CLNILIQKHLNIRLSYVDVKLFSRMARLLPTQTSR--PKNVISKADS------------- 2295
Fly 2296 ------------DLE-KAAPLVAMGFEISDCLYAMQINNWRINDAAIWLSQQKQ--------NTY 2339
Fly 2340 RNP----ALEMKTAV-VDASLISVFIIDDCMDADVPLLEVSLSKFLLNFTFQTQDPNPKETNIRH 2399
Fly 2400 YSLGNIDTEVSVNYYNRRLSGWEPVAETWESNLNWKYTKGHLDNKKRFEIGISSKQMLKLNVTST 2464
Fly 2465 FIELFHMVLKNWTNDF--NDNG------------------------------------------- 2484
Fly 2485 -----AKNFRQRSPFIPFALQNLSGTPLLF----------------KPIYAPLGDLTRSDLQQVE 2528
Fly 2529 LIKNWYSVQPNETKTFDFSQKSKLRHVHSHQLNLHQIFVQIHGWTLIGPISVDKVGMFFRTTKLD 2593
Fly 2594 S-----------------------QFLTKSRIVFDISLIGSAQKLIKVKSSLGVINKLDRNVFLK 2635
Fly 2636 MTLKGTHSDGLSS------ISVIKPNDELSVPLKFIDASLYVAHNTSESDAYEDTG----FSNEE 2690
Fly 2691 ILW----KACGKDDTRQLLAGYDTNKSILYTF-VNISREIY-HCKEQNL-----------PGHKI 2738
Fly 2739 TLLPPLKINNMLCCDLMFKIH-EHATGRINSSESVNIYNVNICQPLNLSITLDNFQLSGQLKIPV 2802
Fly 2803 SHRGVIEPKLKLIDIQKRELHVRVSIQSVPGKGMELYISAPVWIINKTGLPLIYKQEGTSHTAAG 2867
Fly 2868 QFEEHETARQVAPLMFSFSDQEGSPALVLRLGKAYGSNNM--WCKSFSTHKDLADRDLRA---EN 2927
Fly 2928 TKG-SYAIGISVRRGRGLYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNYDRPDPRKIISAPV 2991
Fly 2992 DCNFAFHWPNWDQEQIICVRIPEIECCCWSKGIPIKDVQSLYINVRNEWGEMFFLRLEIISKDAT 3056
Fly 3057 FILLFTDARTLPPPIRIDNCSEVVINFSQLR-SKPVWITPVRPQSSLSYVMDDPLGQQILLMEAP 3120
Fly 3121 GGNMIEFPIN-NKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHR-----------QLVLGVRGK 3173
Fly 3174 --KVVIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDANAVR-----LVLDLE--KAPNPMEF 3229
Fly 3230 TNLVVRTPNKQRVTTQTWRFENGRLMCHAN-MCVQSRFGESGLKPNYEAVVGRTENRASSSKQIP 3293
Fly 3294 IGQHIVAQKLRPGSGQLELSTKMDGPISTIEICDIKIKQNSVFLTPDLLWMHASLNNRQITDKGK 3358
Fly 3359 VSFVHEYLINVELVKGIGISIIARKPCEEIMFISLDHINCDIVQSALENSLDLNIAYIQIDNQLL 3423
Fly 3424 DAVSPIALH-TQTSNDLEETQNAVVLKLKMLPSPNKNAI--IFKYLTLDLKPSTASLEEKLILKV 3485
Fly 3486 ASFLGYGKINRQNLSVQYQFENTDDKPFLQDMK--RYYFENLSIGATQVRLSAFTSSKLPVELHE 3548
Fly 3549 TKKALGLTLIKFEDALIELDRYSDKLHFETMDVYRKELKKHYINQVKWHAAAILGSVDFLGNPLG 3613
Fly 3614 FANDLSEGVSGLIFEGSVKSLVKNVTHGISNSTAKLTETLSDSLGKVVLDDHDNETRQRILELQS 3678
Fly 3679 NTSGGHLAAGLKGLGFGLLGGVTSIVRHTYDGA-TSDGVPGFLSGLGKGLVGTVTKPIIGVLDLA 3742
Fly 3743 SETASAVRETSR-DSHRNAPERKRLPRCVTGAPGGLLPLYSNRQSKGQQYLYLINQKNFSEKIIS 3806
Fly 3807 YEPNLWSDKEARLRLLVSTEYVRIFSLSD--ANPTIMFECHVSEILSCHPVVTNAGTTPTTSSRA 3869
Fly 3870 SASHYIEISTNLPKITRPRIRCRSEECAEAASRCINYAKSVFDERE 3915 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 59/107 (55%) |
VPS13 | 147..368 | CDD:318996 | 59/225 (26%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 54/190 (28%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 234/843 (28%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 114/283 (40%) | ||
VPS13 | <3346..3802 | CDD:330393 | 198/462 (43%) | ||
VPS13D | NP_056193.2 | Chorein_N | 3..112 | CDD:289396 | 59/108 (55%) |
VPS13 | 139..356 | CDD:293513 | 59/228 (26%) | ||
VPS13_mid_rpt | 614..894 | CDD:293515 | 77/284 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 745..796 | 12/54 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1563..1582 | 1/18 (6%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1741..1771 | 2/29 (7%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2070..2108 | 3/37 (8%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2122..2145 | 0/22 (0%) | |||
UBA_VP13D | 2642..2677 | CDD:270491 | 11/34 (32%) | ||
SHR-BD | 3276..3559 | CDD:284143 | 114/282 (40%) | ||
VPS13_C | 3984..4129 | CDD:293514 | 76/146 (52%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165149786 | |
Domainoid | 1 | 1.000 | 497 | 1.000 | Domainoid score | I356 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1796 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H15583 | |
Inparanoid | 1 | 1.050 | 1668 | 1.000 | Inparanoid score | I78 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG50136 | |
OrthoDB | 1 | 1.010 | - | - | D10953at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006123 | |
OrthoInspector | 1 | 1.000 | - | - | oto89935 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106938 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X4414 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.840 |