Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
Alignment Length: | 4451 | Identity: | 829/4451 - (18%) |
---|---|---|---|
Similarity: | 1497/4451 - (33%) | Gaps: | 1423/4451 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 LRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDAL-RSFNLPVEVTAGSIRKIK 65
Fly 66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLDTAEAGWRSEKGKQME 130
Fly 131 SYYFSSYNNWLKYG----TNMATNIIDNIELKISDVHFRF--EDIVDTGKSKICTGIKIGSLTAQ 189
Fly 190 SCDCDWTNGSYKMNN-NEMNYKLVELKELSVYWDLLHEDIK---CQSYSNQEILEKMHSTCE-LR 249
Fly 250 SHNFIIKPICATARWKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQ---RLQMLDKLSEIRQ 311
Fly 312 VKEVRQYRLKRPTCTVESNP-------------------------IAWWKYATI----------- 340
Fly 341 C-----HGFDF----------KKNEEKWLMLK----ENLRYM---------LLYKSIIL------ 371
Fly 372 NPNENLSAADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNEQGKNMLFHWFPNWMGW 436
Fly 437 YANSPSTPNNEQDESLKHLEDDILV--------ALENSLQNSSD------------------LKS 475
Fly 476 DAVFGHFS------IKLLKGLV-----------ILQTEDK-LNDGRNKSMEMQFNNFSAYLQLSP 522
Fly 523 QLTSYTVGISLQEVYLI-----DKTSSDTMHNY-----------------LIKPQTGNTATPNQL 565
Fly 566 VKNAALQEDILFQLQYE---------NCNHLRFQLNIKSKGLDLIYNEDAIQWLLDFLADSNSFK 621
Fly 622 YSPRNRVAKKTDFMK---NWNEMFSGNEVNRKIWMFEIEIFAPRIIFLENYKVSNSLMVLLDFGK 683
Fly 684 LEMRKMEVKRVIPVIESAVTENTSDDDETYLTPCSTPPASEKSGSESPTLLENPKTESFLNK--- 745
Fly 746 -NVQLEYVLHNKIYDKYLINFTNLQ-----VLVCKYEERWQACLKTSSNFHLIDKFNINLTLEQR 804
Fly 805 NIFTVDPEYPSFMLFGTCPTILIHGNEELINN--CCNIMKPIIKASKEMENIYRGGNTIYASERI 867
Fly 868 KNLAEDDRSRVVIEFVMDQLVIEMQSTE----RSIAELQIIGARAGLTKEPHETNISMSVHGLLL 928
Fly 929 VDAIQSFGPDFELLVAS---HRHVGMDSLSGSLKHSAIVSPTSPGSPNFFDRATSPHMITKAVQN 990
Fly 991 IKMGDRSTEFCD----------DEDSTALISVDIKI---------------VPPNESNSMQLH-- 1028
Fly 1029 ---------------------------TTSITFNSLDII----------ANQDTI-----IEILN 1051
Fly 1052 -FAKRT-------LLAQNIFPSESPESP--KEATEAPVDVVDQVDHKSHN-EIFFDFFRLNILLL 1105
Fly 1106 YTIKRDKFNVGRKVGTVTLTEAKI-NASFQSDLSIIGSLGGIQVIDITSEAFCHPRILSVGRDQI 1169
Fly 1170 L---RASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMRMASASYTHC 1231
Fly 1232 PRFLRDVNACITYFKRSLREFATSIG-----NKATDMAKEFVQQVRAVEQIGPVYPQRNRQDNWL 1291
Fly 1292 DIIISSPII-ILPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEIKNTYVYSLNIDEGEY 1355
Fly 1356 SFNV--HPAKNKDAIPILHDTAITLQLYAGYSDDNDEDKQLNRFSIKGSMVEALKVSLNRKQYEL 1418
Fly 1419 LLESIRYAT------------------------NFSNEVLNESDELD-----QNGDI----EPTA 1450
Fly 1451 NIDAESIISTTIQFSVPVFQINLQNEYHNDLINLTFKNFNVKHISKGFDKDVEVVLKSVLMEDLK 1515
Fly 1516 SDLTSPFRNMVTSVD------LEQKI-KKNEMTSSSCPDLPSYCNSLKNRSSSVPSC------FY 1567
Fly 1568 NHMQVKVFGGDQKYTSSNKNELGKKKESQTLVIYKSHTGRSA-QNGKLEQTSSIQFNCLNLAICV 1631
Fly 1632 ERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKHIDKVCSKLKVSIRSF----NFTLIRNESLLSRV 1692
Fly 1693 NVS----------------NAVFMILQDPYSKIVEGCLGSVSV-----NDLTKYGNIYKQKFLTS 1736
Fly 1737 GTEALNFVYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTK--RFSTELHVFVKDLLQLQTPV-- 1797
Fly 1798 ------------IRKLKK-------------------HGSEQNMRPSKMKLVIQADSPVIVLPSS 1831
Fly 1832 YNRNEVIIAYLGQFSLKNS----FHFASDNNIISKMS----ATPSKDEILDVMRIDLVNINLFSG 1888
Fly 1889 ERSSMK-AKADQEKDRI-IIAD---MNFLR----LGQPFFNESCFL------HLQLE---RNLSA 1935
Fly 1936 DAHRVCPDISVQGTFSKLSGIINIQQYKLIRSFLNNN----IGEQTDDIYMNYHNNSC---TSIE 1993
Fly 1994 RLSTINLMPKNEVSKIVSILISIRILLEDVS------------LLLALNTSQSAAIEPLAC---- 2042
Fly 2043 -IHFLKSTLEID-LFSDGSQDIDL----ISSNILIVDERNESDKSNENVFKNILEPSKKEVRIEN 2101
Fly 2102 SVQVEVHCRKKATFSKYTIMLNNMRVFALLSFLDQLKSYLQEDSPAPVVNNAANQIAQKPQIDTS 2166
Fly 2167 ISTEYVVNI------TDSEIIFAEECSRLDSNAIILKSTTVICYKPNSNIVPLSLDINHLEIFSC 2225
Fly 2226 TLDAEEESALSIIDPFTLIIELRS--NCLNILIQKHLNIRLSYVDVKLFSRMARLLPTQTSRPKN 2288
Fly 2289 VISKADSDLEKAAPLVAMGFEISDCLYAMQINNWRINDAAIWLSQQKQNTYRNPALEMKTAVVDA 2353
Fly 2354 SLISVFIIDDCMDADVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYS-----------LGN--- 2404
Fly 2405 --IDTEVSVNYYNRRLSGWEPVAETWESNLNWKYTKGHLDNKKRFEIGISSKQMLKLNVTSTF-- 2465
Fly 2466 ----IELFHMVLKNWTNDFNDNGAKNFRQRSPFIPFAL----------QNLSGTPLLFKPIYAPL 2516
Fly 2517 GDLTRSDLQQVELIKN----WYSVQPNETKTFDFSQKSKLRHVHSHQLNLHQIFVQIHGWTLIGP 2577
Fly 2578 ISVDKVGMFFRTTKLDSQFLTKSRIVFDISLIGSAQKLIKVKSSLGVINKLDRNVFLKMTLKGTH 2642
Fly 2643 SDGLSSISVIKPNDELSVPLKFIDASLYVAHNTSESDAYE-DTGFSNEEILWKACGKDDTRQLLA 2706
Fly 2707 GYDTNKSILY-----TFVNISREIYHCKEQNLPGHKITLLPP--LKINNMLCCDLMF--KIHEHA 2762
Fly 2763 TGRINSSESVNIYNVNICQPLNLS----------ITLDNFQLSGQLKIPVSHRGV-IEPKLK--- 2813
Fly 2814 LIDIQ-----KRELHVRV---SIQSVPGKGMELYIS----APVWIINK---TGLPLIYKQEGTSH 2863
Fly 2864 TAAGQFEEHETARQVAPL-----MFSFSDQEGSPALVLRLGKAYGSNNMWCKSFSTHKDLADRDL 2923
Fly 2924 RAENTKGSYAIGISVRRGRGLYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNYDRPDPRKIIS 2988
Fly 2989 APVDCNFAFHWPNWDQEQIICVRIPEIECCCWSKGIPIKDVQSLYINVRNEWGEMFFLRLEIISK 3053
Fly 3054 D-ATFILLFTDARTLPPPIRIDNCSEVVINFSQLRSKPVWITPVRPQSSLSYVMDDPLGQ----- 3112
Fly 3113 QILLMEAPGGNM-------------IEFPINN------------KNN------IKKTLTYTNFIY 3146
Fly 3147 IAFQGTFERSNEEENTHRQLVLGVRGKKVVIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDA 3211
Fly 3212 NAVRLVLDLEKAPNPMEFTNLVVRTPNKQRVTTQTWRFENGRLMCHANMCVQSRFGESGLKPNYE 3276
Fly 3277 AVVGRTENRASSSKQIPIGQHIVAQKLRPGSGQLELSTKMDGPISTIEICDIKIKQNSVFLTPD- 3340
Fly 3341 ------LLWMHASLNNRQITDKGKVSFVHEYLINVELVKGIGISIIARKPCEEIMFISLDHINCD 3399
Fly 3400 IVQSALENSLDL-NIAYIQIDNQLLDA---VSPIALHTQTS--NDLEETQNAVVLKLKMLPSPNK 3458
Fly 3459 NAIIFKYLTLDLKPSTASL-----EEKLILKVASFLGYGKINRQNLSVQYQFENTDDKPFLQDMK 3518
Fly 3519 RYYFENLSIGATQVR-----LSAFTSSKLPVELHETKKALGLTLIKFEDALIELDRYSDKLHFET 3578
Fly 3579 MDV-YRKELKKHYINQVKWHAAAILGSVDFLGNPLGFANDLSEG--------VSGL--------- 3625
Fly 3626 -IFEGSVKSLVKNVTHGISNSTAKLTETLSDSLGKVVLD-DHDNETRQRILELQSNTSGGHLAAG 3688
Fly 3689 LKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLSGLGKGLVGTVTKPIIGVLDLASETASAVRETS 3753
Fly 3754 RDSHRNAPERKRLPRCVTGAPGGLLPLYSNRQSKGQQYLYLINQKNFSEKIISYEPNLWSDKEAR 3818
Fly 3819 LRLLVSTEYVRIFSLSDANPTIMFECHVSEI 3849 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 31/108 (29%) |
VPS13 | 147..368 | CDD:318996 | 45/294 (15%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 37/191 (19%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 127/709 (18%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 54/294 (18%) | ||
VPS13 | <3346..3802 | CDD:330393 | 113/491 (23%) | ||
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 33/129 (26%) |
VPS13_C | 3319..3468 | CDD:293514 | 43/164 (26%) | ||
ATG_C | 3473..3546 | CDD:286423 | 29/76 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45453479 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR16166 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.060 |