Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
Alignment Length: | 4289 | Identity: | 823/4289 - (19%) |
---|---|---|---|
Similarity: | 1463/4289 - (34%) | Gaps: | 1430/4289 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 VLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIKLQIPVRQF 73
Fly 74 RTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLDTAEAGWRSEKGKQMESYYFSSYN 138
Fly 139 NWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQSCDCDWTNGSYKMN 203
Fly 204 NNEMNYKLVELKELSVYWDLLHEDIKC--QSYSN------QEILEKMHSTCE--LRSHNFIIKPI 258
Fly 259 CATARWKRDKCQQVIRTK-DKPRVSCELLVPEVVIDISKVQRLQMLDKLSEIRQVKEVRQ----Y 318
Fly 319 RLKRP-TCTVESNPIAWWKYA-TICHGFDFKKNEEKWLM--LKENLR----YMLLYKSIILNPNE 375
Fly 376 NLSAADKEFKAYIESDRKISDLTIMR-RICFEKVFTKGFAFESQNEQGKNMLFHWFPNWMGWYAN 439
Fly 440 SPSTPNNEQDESLKHLEDDILVALENSLQNSSDLKSDAVFGHFSIKLLKGLVILQTEDKLNDGRN 504
Fly 505 KSMEMQFNNFSAYLQLSPQLTSYTVGISLQEVYLIDKTSSDTMHNYLIKPQTGNTATPNQLVKNA 569
Fly 570 ALQEDILFQLQYENCNHLRFQLNIKSKGLDL-IYNEDAIQWLLDFLADSNSFKYSPRNRVAKKTD 633
Fly 634 FMKNWNEMFSGNEVNRKIWMFEIEIFAPRIIFLENYKVSNSLMVLLDFGKLEMRKMEVKRVIPVI 698
Fly 699 ----ESAVTENTSDDDETYLTPCSTPPASEKSGSESPTLLENPKTESFLNKNVQLEYVLHNKIYD 759
Fly 760 KYLINFTNLQVLVCKYEERWQACLKTSSNFHLIDKFNINLTLEQRNIFTVDPEYPSFMLFGTCPT 824
Fly 825 ILIHGNEELINNCCNIMKPIIKASKEMENIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLVI 889
Fly 890 EMQSTERSIAELQIIGARAGLTKEPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSL 954
Fly 955 ----SGSLKHSAIVSPTSPGSPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIK 1015
Fly 1016 IVPPN--------ESNSMQLHTTSITFNSLDIIANQDTIIEILNFAKRTLLAQNIFPSESPESPK 1072
Fly 1073 EATEAPVDVVDQVDHKSHNEIFFDFFRLNILLLYTIKRDKFNVGRKVGT-VTLTEAKINAS---- 1132
Fly 1133 --FQSDLSIIGSLGGIQVIDITSEAFCHPRILSVGRDQILRASDTNKQTVLSQLSNEIYSNNYNE 1195
Fly 1196 ETKSDESDAISFQSHWSDKTTCTFQMRMASASYTHCPRFLRDVNACITYFKRSLREFATSIGNKA 1260
Fly 1261 TDMAKEFVQQVRAVEQIGPVYPQRNRQDNWLDIIISSPIIILP---ISNTSTNVLIANLGKIS-- 1320
Fly 1321 ---CSNAVKCDSDEFNESYTIEIKNTYVYSLNIDEGEYSFNVHPAKNKDAIPILHDTAITLQLYA 1382
Fly 1383 GYSDDNDEDKQLNRFSIKGSMVEALKVSLNRKQYELLLESIRYATNFSNEVLNESDELDQNGDIE 1447
Fly 1448 PTANIDAESIISTTIQFSVPVFQINLQNEYHNDLINLTFKNFNVKHISKGFDKDVEVVLKSVLME 1512
Fly 1513 DLKSDLTSPFRNMVTSVDLEQKIKKNEMTSSSCPDLPSYCNSLKNRSSSVPSCFYNHMQVKVFGG 1577
Fly 1578 DQKYTSSNKNELGKKKESQTLVIYKSHTGRSAQNGKLEQTSSIQFNCLNLAICVERWYTIFDFFG 1642
Fly 1643 LVSVDNVNEKYPEEMKLVEKH-IDKVCSKLKVSIRSFNFTLIRNESLLSRVNVSNAV-FMILQDP 1705
Fly 1706 YSKIVEGCLGSVSVNDLTKYGNIYKQKFLTSGTEALN---FVYKKKLVDLEALNTLDTDSTLRIN 1767
Fly 1768 MSAVHYIHTKRFSTELHVFVKDLLQLQTPV-------IRKLKKHGSEQNMRPSKMKLVIQADSPV 1825
Fly 1826 IVLP-SSYNRNEVIIAYLGQFSLKNSFHFASDNNIISKMSATPSKDEILDVMRIDLVNIN----- 1884
Fly 1885 LFSGERSSMKAKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLERNLSADAHRVCPDISVQGT 1949
Fly 1950 FSKLSGIINIQQYKLIRSFLNNNIGE------------QTDDIYMNYHNNSCTSIERLSTINLMP 2002
Fly 2003 KNEVSKIVSILISIRILLEDVSLLLALNTSQSAAIEPLACIHFL--KSTLEIDLFSDGSQDIDLI 2065
Fly 2066 SSNILIVDERNESDKSNENVF---KNILEPSKKEVRI------ENSVQVEVHC--RKKATFSKYT 2119
Fly 2120 IMLNNMRVFALLSFLDQLKSYL----QED-------SPAPVVNNAANQ---------IAQKPQID 2164
Fly 2165 TSISTEYVVN--------ITDSEIIFAEECSRLDSNAIILKSTTVICYKPNSNIVPLSLDINHLE 2221
Fly 2222 IFSCTL--DAEEESALSIIDPFTLIIELRSNCLNILIQ--------KHLNIRLSYVDVKLFSRMA 2276
Fly 2277 RLLPTQTSRPKNVISKADSDLEKAAPLVAMGFEISDCLYAMQINNWRINDAAIWLSQQ-KQNTYR 2340
Fly 2341 NPALEMKTAVVDASLISVFIIDDCMDADVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYS--LG 2403
Fly 2404 NIDTEV-------------------SVNYYNRRLSGWEPVAETWE---SNLNWKYTKGHLDNKKR 2446
Fly 2447 FEIG--------------------ISSKQMLKLNVTSTFIELFHMVLKNWTNDFNDNGAKNFRQR 2491
Fly 2492 SPFI--PFALQNLSGTPL---LFKPIY---------APLGDLTRSDLQQVELIKNWYSVQPNETK 2542
Fly 2543 TFDFS-------QKSKLRHVHSHQLNLHQIFVQIHGWTLIGPISVDKVGMFFRTTKLDSQFLTKS 2600
Fly 2601 R--------IVFDISLIGSAQKLIKVKSSLGVINKLDRNVFLKMTLKGTHSDGLSSISV--IKPN 2655
Fly 2656 DELSVPLKFIDASLYVAHNTSESDAYEDTGF--SNEEILWKA------------CGKDDT-RQLL 2705
Fly 2706 AGYDTNKSILYTFVNISREIYHCKEQNLPGHKITLL---------PPLKINNMLCCDLMFKIHEH 2761
Fly 2762 ATGRINSSESVNIYNVNICQPLNLSITLDNFQLSGQLKIPVSHRGVIE-PKLKLIDIQKRE---L 2822
Fly 2823 HVRV---------------------------SIQSVPGKGMELYIS-------------APVWII 2847
Fly 2848 NKTGLPLIYKQEGTSHTAAGQFEEHETARQVAPLMFSFSDQEGSPALVLRLGKAYGS----NNMW 2908
Fly 2909 CKSFSTHKDLA----DRDLRAENTKGSYAIGISVRRGRGLYACTTFVTLSPRFHLHNRSGYKLEF 2969
Fly 2970 MQLCDIVNYDRP-------DPRKIISAPVDCNFAFHWPNWDQEQIICVRI----------PEIEC 3017
Fly 3018 CCWSKGIPIKDVQSLYINVRNEWGEMFFLRLEIISKDATFILLFTDARTLPPPIRIDNCSEVVIN 3082
Fly 3083 FSQLRSKPVWITPVRPQSSLSYVMDDPLGQQILLMEAPGGNMIEFPINNKNNIKKTLTYTNFIYI 3147
Fly 3148 AFQGTFERSNEEENTHRQLVLGVRGKKVVIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDAN 3212
Fly 3213 AVRLVLDLEKAPNPMEFTNLVVRTPNKQRVTTQTWRFENGRLMCHANMCVQSRFGESGLKPNYEA 3277
Fly 3278 VVGRTENRA---SSSKQIPIGQHIVAQKLRPGSGQLELSTKMDGPISTIEICDIKIKQNSVFLTP 3339
Fly 3340 DLLWMHASLNNRQIT-DKGKVSFVHE-YLINVELVKGIGISIIARKPCEEIMFISLDH---INCD 3399
Fly 3400 IV-----------------------QSALENSLDLNIAYIQIDNQLLDAVSPIAL-------HTQ 3434
Fly 3435 TSNDLEETQNAVVLKLKMLPSPNKNAIIFKY---------LTLDLKPSTASLEEKLILKVASFLG 3490
Fly 3491 YGKINRQNL-SVQYQFENTDDKPFLQDMKRYYFENLSIGATQVRLS---AFTSSK-LPVELHETK 3550
Fly 3551 KALGLTLIKFEDALIELDRYSDKLHFETMDVYRKELKKHYINQVKWHAAAILGSVDFLGNPLGFA 3615
Fly 3616 NDLSEGVSGLIFEG-----------------SVKSLVKNVTHGISNSTAKLTETLSDSLGKVVLD 3663
Fly 3664 -DHDNETRQRILELQSNTSGGHLAAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLSGLGKGL 3727
Fly 3728 VGTVTKPIIGVLDLASETASAVR---ETSRDSHRNAPERKR------LPRCVTGAPGGLLPLYSN 3783
Fly 3784 RQSKGQ-----------------QYL------------------------YLINQ---------- 3797
Fly 3798 -----KNFSEKIISYEPNLWSDKEA-RLRLLVSTEYVRIFSL-------SDANP---TIMFECH 3845 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 37/102 (36%) |
VPS13 | 147..368 | CDD:318996 | 57/243 (23%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 31/184 (17%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 146/783 (19%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 67/314 (21%) | ||
VPS13 | <3346..3802 | CDD:330393 | 137/587 (23%) | ||
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 37/102 (36%) |
VPS13 | 140..370 | CDD:318996 | 57/244 (23%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 64/382 (17%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 64/301 (21%) | ||
VPS13 | <2701..3232 | CDD:330393 | 133/545 (24%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 42/170 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45453481 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.980 |