DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vps13D and Vps13a

DIOPT Version :9

Sequence 1:NP_729825.2 Gene:Vps13D / 39448 FlyBaseID:FBgn0052113 Length:3919 Species:Drosophila melanogaster
Sequence 2:NP_766616.2 Gene:Vps13a / 271564 MGIID:2444304 Length:3166 Species:Mus musculus


Alignment Length:4166 Identity:758/4166 - (18%)
Similarity:1388/4166 - (33%) Gaps:1467/4166 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
            :...::..|||.:||.|:.||:.:|||:.:..|.|.|:|:.|:::||...::|.:|..|.|..:|
Mouse     2 VFESVVVEVLNRFLGDYVVNLDESQLSLGIWKGAVALKNLVIKENALHELDVPFKVKVGHIGSLK 66

  Fly    66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLDTAEAG----WRSEKG 126
            |:||.:...|.|....:|.:|.:|.|.:...:|..||:.|.:|.|...|...|..    :..||.
Mouse    67 LKIPWKNLYTQPVEAVLEEIFLLIVPSSRIQYDPIKEEKQLMETKQQELKRIEKAKQKVFDKEKP 131

  Fly   127 KQMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQSC 191
            ::.:...|:.         .:.|.||.|::::||.:|.|:||.:..|...:..||.:.:::.|:.
Mouse   132 REEKQDTFTE---------KLVTQIIQNLQVQISSIHIRYEDDITNGDKPLSFGISLQNISLQTT 187

  Fly   192 DCDWTNGSYKMNNNEMNYKLVELKELSVYWDLLHEDIKCQSYS-----------NQEILEKMHST 245
            |..|....:. |..::..||:.|..|..||::..|......|.           |:.|:.:    
Mouse   188 DQYWIPCLHD-NTEKLVRKLIRLDNLFAYWNVNSEMFYLNDYDESLKALKNGIVNENIVPE---- 247

  Fly   246 CELRSHNFIIKPICATARWKRDKCQQVIRTKD----KPRVSCELLVPEVVIDISKVQRLQMLDKL 306
                .::|:.:||.|:|:      .|:.|..|    .|:::..:.:..:.|:.:|.|...:::.|
Mouse   248 ----GYDFVFRPISASAK------LQMNRRSDFDFSDPKINLAVDLHTIAIEFNKPQYFSLMELL 302

  Fly   307 SEIRQVKEVRQYRLKRPTCTVESNPIAWWKYA-------TIC-------------HGFDFKKNEE 351
            ..|..:.:.:.||..:|:..:..:...||.||       .:|             |.:..|    
Mouse   303 ESIDMMTQNQPYRKFKPSVPLHLHAKEWWAYAIHSILEVNVCPSLRMWSWEHIRNHRYKMK---- 363

  Fly   352 KWLMLKENLRYMLLYKSIILN--PNENLSAADKEFKAYIESDRKISDLTIMR-------RICFEK 407
                     ||...||..:.:  |:..:..:.:|    :|....:.::||.|       :....|
Mouse   364 ---------RYREFYKKKLTSKKPSPEILMSLEE----LEKTLDVFNITIARQQAEVEAKKAGYK 415

  Fly   408 VFTKGFAFESQNEQGKNMLFHWFPNWMGW-YANSPSTPNNEQDESLKHLEDDILVALENSLQ--- 468
            ::.:|......|           ..|.|| :..|.|..|.:||.....|| ::|...|.||.   
Mouse   416 IYKEGVKDPEDN-----------AGWFGWLWTWSESNANQQQDVKPGILE-EMLTPEEKSLLYEA 468

  Fly   469 -NSSDLKSDAVFGHFSIKLLKGLVILQTEDKLNDGRNKSMEMQFNNFSAYLQLSPQLTSYTV-GI 531
             ..|:...|..... :.:.||..|.|         ::.|:.::.|:      ..|:|.:..| |:
Mouse   469 IGYSETAVDPTLPK-TFEALKFFVHL---------KSMSIVLRENH------QKPELLNVVVEGL 517

  Fly   532 SLQEVY------LIDKTSSDTMHNYLIKPQTGNTATPNQLVKN---AALQEDILFQLQYENCNHL 587
            |...|.      :..:|..|:.|         .|..|:...|.   ::|.:..|.|:.:| .|.|
Mouse   518 STSVVQRPGAQAIKFETKIDSFH---------ITGLPDDFKKPHLLSSLDDTSLLQITFE-INPL 572

  Fly   588 R----FQLNIKSKGLDLIYNEDAIQWLLDFLADSNSFKYSPRNRVAKKTDFMKNWNEMFSGNEVN 648
            .    .:..|:::.|::||:...:..:::|      |:......:|:.|.......|.|......
Mouse   573 NETVAQRCTIEAEPLEIIYDARTVNSIVEF------FRPPKDVHLAQLTSVTLTKLEEFRAKTAT 631

  Fly   649 RKIWMFE--------IEIFAPRIIFLE--NYKVSNSLMVLLDFGKLEMRKMEVKRVIPVIESAVT 703
            ..:::.|        |.:.|..:|..:  |:..:::|: |||.|.|   |:..||          
Mouse   632 GLLYVIETQKVLDLRINVKASYVIVPQYGNFSPTSNLL-LLDLGHL---KVSSKR---------- 682

  Fly   704 ENTSDDDETYLTPCSTPPASEKSGSESPTLLENPKTESFLNKNVQLEYVLHNKIYDKYLINFTNL 768
                    ..|.|...|  ||.|                      ||.::| :.||.:.|..|::
Mouse   683 --------RSLLPDVRP--SEAS----------------------LEDIMH-RAYDSFDIQLTSI 714

  Fly   769 QVLVCKYEERWQACLKTS-SNFHLIDKFNINLTLEQRNIFTVDPEYPSFMLFGTCPTILIHGNEE 832
            |:|..:..:.|:...|.: |..|::...::|:.|.:..:| :|.:.|.|.:.|..|.:.:..:: 
Mouse   715 QLLYSRVGDNWKEARKLNVSTQHILIPMHVNVELSKAMVF-MDIKMPKFKISGKLPLVSLRISD- 777

  Fly   833 LINNCCNIMKPIIKASKEMENIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLVIEMQSTERS 897
                            |:::.|                                           
Mouse   778 ----------------KKLQGI------------------------------------------- 783

  Fly   898 IAELQIIGARAGLTKEPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSLSGSLKHSA 962
               ::::|:   :.|....|::|...         :||......|..||                
Mouse   784 ---MELLGS---IPKPEPVTDVSAPA---------RSFQIQASALPVSH---------------- 817

  Fly   963 IVSPTSPGSPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIKIVPPNESNSMQL 1027
                            .|..:|....|.:...|...||.|...|           |..|...:..
Mouse   818 ----------------ISQKLIPLLEQPVTEDDSEEEFFDAPCS-----------PLEECPQVSC 855

  Fly  1028 HTTSITFNSLDIIANQDTIIEILNFAKRTLLAQNIFPSESPESPKEATEAPVDVVDQVDHKSHNE 1092
            .........|.   .:|.::.::....|..:|                                |
Mouse   856 RDKCTRQKKLQ---KKDCVMNLIQLRMRFEVA--------------------------------E 885

  Fly  1093 IFFDFFRLNILLLYTIKRDKFNVGRKVGTVTLTEAKINASFQSDLSIIGSLGGIQVIDITSEAFC 1157
            :...|:.|                  ||...|...::.|                          
Mouse   886 VSIQFYHL------------------VGDCELPVLEMGA-------------------------- 906

  Fly  1158 HPRILSVGRDQILRASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMR 1222
                |.:|.:...|..|......|.:|                                      
Mouse   907 ----LGLGTEAEFRTFDLKGSAFLKEL-------------------------------------- 929

  Fly  1223 MASASYTHCPRFLRDVNACITYFKRSLREFATSIGNKATDMAKEFVQQVRAVEQIGPVYPQRNRQ 1287
                 :..||.:|.:                    ||.                  |||      
Mouse   930 -----WLKCPEYLDE--------------------NKK------------------PVY------ 945

  Fly  1288 DNWLDIIISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEIKNTYVYSLNIDE 1352
                        :|..:.||..::|.....|:              |.....:.:||        
Mouse   946 ------------LITTLDNTMEDLLTLEFMKV--------------EKNAPNLNSTY-------- 976

  Fly  1353 GEYSFNVHPAKNKDAIPILHDTAITLQLYAGYSDDNDEDKQLNRFSIKGSMVEALKVSLNRKQYE 1417
                                                            .::::.:||:.:.....
Mouse   977 ------------------------------------------------NNVLQLIKVNFSSLDIH 993

  Fly  1418 LLLESIRYATNFSNEVLNE---------SDELDQNGDI-------EPTANIDAESIISTTIQFSV 1466
            |..|::....|:.|.:|.|         :.|.:..|||       .||    .|.||:..:...:
Mouse   994 LHTEALLNTMNYLNNILPELREKSASVSAAEPEDKGDIIKKLALKLPT----NEDIITLQLLAEL 1054

  Fly  1467 PVFQINLQNEYHNDLINLTFKNFNVKHIS-KGFDKDVEVVLKSVLMEDLKSDLTSPFRNMVTSVD 1530
            ...||.:|::..           |:..|. :|.|.:       ::|:.|.:::.:..||::.   
Mouse  1055 SCLQIFIQDQKQ-----------NISEIKIEGLDSE-------MIMKPLVTEINAKLRNIIV--- 1098

  Fly  1531 LEQKIKKNEMTSSSCPDLPSYCNSLKNRSSSVPSCFYNHMQVKVFGGDQKYTSSNKNELGKKKES 1595
                                                                          .:|
Mouse  1099 --------------------------------------------------------------LDS 1101

  Fly  1596 QTLVIYKSH---TGRSAQNGKLEQTSSIQFNCLNLAICVERWYTIFDFFGLVSVDNVNEKYP-EE 1656
            ..:.|||..   ||:.                            :|. |.::|..:....|. .:
Mouse  1102 DKMAIYKKALYITGKE----------------------------VFS-FKMISYMDATAGYAYTD 1137

  Fly  1657 MKLVEKHIDKVCSKLKVSIRSFNFTLIRNESLLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVND 1721
            |.:|:..:                                           .:..||:..|.:. 
Mouse  1138 MSVVDIRV-------------------------------------------HLTVGCIEVVFIT- 1158

  Fly  1722 LTKYGNIYKQKFLTSGTEALNFVYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTKRFSTELHVF 1786
                      |||.|   .|.|:                     .|..|                
Mouse  1159 ----------KFLYS---ILAFI---------------------DNFQA---------------- 1173

  Fly  1787 VKDLLQLQTPVIRKLKKHG-SEQNMRPSKMKLVIQADSPVIVLPSSYNRNEVIIAYLGQFSLKNS 1850
            |||.|...|....::...| .|...:.|:..|.:...:||:::|.|.....|.:|..|..::||.
Mouse  1174 VKDALAEATVQAAEMAADGVKELARKSSRFALDVNIKAPVVLIPQSPVSQNVFVADFGLITMKNI 1238

  Fly  1851 FHFASDNNIISKMSATPSKDEI---LDVMRIDLVNINLFSGERSSMKAKADQEKDRIIIADMNFL 1912
            |           ::.|.::..|   :|::.|.|..:.|:   ||..:....||     :.|: .|
Mouse  1239 F-----------VTVTETQSNIPPVIDLITIKLSKMRLY---RSQFRNDTYQE-----VLDL-LL 1283

  Fly  1913 RLGQPFFNESCFLHLQLERNLSADAHRVCPDISVQGTFSKLSGIINIQQYKLIRSFLNNNIGEQT 1977
            .|.         |.:.:|||||.:.::..|..:::.....:..|::.:....:...|:.||....
Mouse  1284 PLN---------LEVIVERNLSWEWYKEVPCFNIKAQLKPMEFILSQEDLTTVFQTLHGNIWYGQ 1339

  Fly  1978 DDIYMNYHNNSCTSIERLSTINLMPKNEVSKIVSILISIRILLEDVSLLLALNTS------QSAA 2036
            |             :...|:.|..|:...|.:.|        ..|.|....:..:      |::.
Mouse  1340 D-------------LSAPSSANKDPETMTSGVTS--------PPDHSPATVVTAAVVEVHPQASQ 1383

  Fly  2037 IEPLACIHFLKSTLEIDLFSDGSQDI------------------DLISS---------------- 2067
            ...:..:.|....|.:.|:|.|..:.                  ::|||                
Mouse  1384 AHTMLNVSFQTDYLTMALYSPGPDEASFTDVRDPSLELAEFKLENIISSLKIYTDDSTVFSFSVK 1448

  Fly  2068 NILIVDERNESDKSNENVFKNILEPSKKEVRIENSVQVEVHCRKKATFSKYTIMLNNMRVFALLS 2132
            |.::.|:|:...|:...:....:...||::       |::..||..||.....::..|.|.|.:.
Mouse  1449 NCILDDKRSHVMKATPRMIGLTVGFDKKDM-------VDIKYRKIKTFVVTDAVVQEMYVCASVE 1506

  Fly  2133 FLDQLKSYLQEDSPAPVVNNAANQIAQKPQIDTSIST--------------EYVVNITDSEIIFA 2183
            ||            ..|.:...:.......::||:.|              |..:.|.:.||:|.
Mouse  1507 FL------------MTVAHIFFDAYMTSTALETSVQTRTTREAPAQELGKWEMNILIKNPEIVFV 1559

  Fly  2184 EECSRLDSNAIILKSTTVICYK--PNSNIVPLSLDINHLEIFSCT-LDAEEESAL-SIIDPFTLI 2244
            .:.:|.|:.|:::.:...||.|  |.||.|..:  |..|::.:|. |..:.:..: :::.|..|.
Mouse  1560 ADMTRNDAPALVITTQCEICCKGEPTSNTVTAA--IKDLQVRACPFLPVKRKGKVTTVLQPCDLF 1622

  Fly  2245 IELRS-----NCLNILIQKHLNIRLSYVDVK-LFSRMARLLPTQTSRPKNVISKADSDLEKAAPL 2303
            .:...     ..::|.: |.|.:::|.|.:. :.:..:.|..|:.:.|:...|.           
Mouse  1623 YQATQLGRDPQMIDISV-KSLTLKVSPVIINTIITITSALYTTKETVPEENTSN----------- 1675

  Fly  2304 VAMGFEISDCLYAMQINNWRINDAAIWLSQQKQNTYRNPALEMKTA--VVDASLISVFIIDDCMD 2366
            :|..::..|   ...:..|       :|.:..::....|..|:...  .::..:.|:||:   ::
Mouse  1676 IAHLWDKKD---TKNLKMW-------FLEESNESEKVVPTNEVMPGGETLNLRIDSIFIV---LE 1727

  Fly  2367 A-----DVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYSLGNI--DTEVSVNYYNRRLSGWEPV 2424
            |     .||:|       |....|..:..|       ..||.|:  ..|:.|:|||.....|||:
Mouse  1728 AGIGHRTVPML-------LAKACFSGESKN-------WLSLINLHCHLELEVHYYNEMFGVWEPL 1778

  Fly  2425 AETWES---------NLNWKYTK----------GHLDNKK--RFEIGIS--SKQMLKLNVTSTFI 2466
            .|..|.         ||..|..|          ...:|.|  .::..||  |:..|.:.::...:
Mouse  1779 LEPLEIDQTDDFRPWNLGIKMKKKAKEAIVESDSEAENYKVPEYKTAISFYSRDQLNITLSKCGL 1843

  Fly  2467 ELFHMVLKNWTNDFNDNGAKNFRQRSPFIPFALQNLSGTPLLFKPIYAPLGDLTRSD---LQQVE 2528
            .:.:.:::.:|.....:.:...|..:||:.|   |..|..:...|          ||   :..|.
Mouse  1844 VMLNNLVEAFTEAATGSSSVFLRDLAPFMIF---NSLGLTVSVSP----------SDSFSVLNVP 1895

  Fly  2529 LIKNWYSVQPNETKTFDFSQKSKLRHVHSHQLNLHQIFVQIHGWTLIGP--------ISVDKVGM 2585
            |.|: |.::.:|:.:.|:.:.....|.::......::|     :.|:.|        |.:.|||.
Mouse  1896 LAKS-YELKNDESLSMDYVRTKDNDHFNAMTSLSSKLF-----FILLTPANHSVADKIPLTKVGR 1954

  Fly  2586 FFRTTKLDSQFLTKSRIVFDISLIGSAQKLIKVKSSLGVIN--KLDRNVFLKMTLKGTHSDGLSS 2648
            ...|.:.....:.:| |:..|..:..::| :.::|.:.:.|  .:..:||          :|.:.
Mouse  1955 RLYTVRHRESGVERS-IICQIDTVEGSKK-VTIRSPVQIKNHFSIPISVF----------EGDTL 2007

  Fly  2649 ISVIKPNDELSVPLKFIDASLYVAHNTSESDAYEDTGFS-----NEEILWKACGKDDTRQLLAGY 2708
            :.:..|.:|.::||....:||.:.....:....|...|.     :.::|.|.|           .
Mouse  2008 LGIASPENEFNIPLASYRSSLSLVPEDQDYQLCEGIDFEEIIKYDGQLLKKKC-----------R 2061

  Fly  2709 DTNKSILYTFVNI--------SREIYHCKEQNLPGHKITLLPPLKINNMLCCDLMFKIH--EHAT 2763
            .||.|.....:||        |..:|.....:|| :.:.|.||:.|.|:|...:.:.|.  |:..
Mouse  2062 STNPSKKSFVINIVPEKDNLASLSVYSEDGWDLP-YVLHLWPPILIRNLLPYKVAYYIEGIENTV 2125

  Fly  2764 GRINSSESVNIYNVNICQ-PLNLSITLD--NFQLSGQLKIPVSHRGVIEPKLK-LIDIQKRELHV 2824
            ..::...|..||||.:.| .|:|.: ||  |.....:..|..|.:.:...... |.:::|.:|.:
Mouse  2126 VTLSEGHSSQIYNVEMDQAKLHLKL-LDYLNHDWKSEFYIRSSQQDINFINFTCLTEMEKSDLDI 2189

  Fly  2825 RVSIQSVPGKGMELYISAPVWIINKTGLPLIYKQEGTSHTAAGQFEEHETARQVAPLMFSFSDQE 2889
            .:.:....|:.:..:.| |.|::|||...|.||.:|        ...........|::|||... 
Mouse  2190 AIHMTYNTGQTVVAFHS-PYWMVNKTNRMLQYKADG--------IHRKHPPNYTKPVLFSFQPN- 2244

  Fly  2890 GSPALVLRLGKAYGSNNMWCKSFSTHKDLADR----------DLRAENTKGSYAIGISVRRGRGL 2944
                        :..||...:...|..:|:|:          .:|.:..|..|.:|:::....  
Mouse  2245 ------------HFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIRCKGLKMEYQVGVTINLSS-- 2295

  Fly  2945 YACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNYDRPDPRKIISAPVDCNFAFHWPNWDQEQIIC 3009
            :..|..||..|.:.:.|:|.|.:.       |..:..|               .|.:.|.||   
Mouse  2296 FNITRIVTFIPFYMIKNKSKYHIS-------VAEEGSD---------------KWLSLDLEQ--- 2335

  Fly  3010 VRIPEIECCCWSKGIPIKDVQSLYINVRNEWGEMFFLRLEIISKDATFILLFTDARTLPPPIRI- 3073
                         .||.             |.|           :|:.|||....|:..||.|| 
Mouse  2336 -------------SIPF-------------WPE-----------NASNILLIQVERSEDPPKRIY 2363

  Fly  3074 ----DNC-------------SEV-------VINFS-------------QLRSKPVWITPVRPQSS 3101
                |||             :||       ||.||             ..:|.||...    |||
Mouse  2364 FNKQDNCILLRLNNELGGIIAEVNLAEHSTVITFSDYHDGAATFLLINHTKSDPVQYN----QSS 2424

  Fly  3102 LSYVMD-------------DPLGQQILLMEAPGGNMIEFPINNKNNI-------KKTLTYTNFIY 3146
            |..:.|             ||:|.:.|.... |.:..|  :.:|:::       |||:...:|  
Mouse  2425 LGEIEDSLPPGKAVYYTWADPVGSRKLKWSC-GQSYGE--VTHKDDMMTPISVGKKTIYLVSF-- 2484

  Fly  3147 IAFQGTFERSNEEENTHRQLVLGVRGKKVVIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDA 3211
              |:|.           ::::|.....:|..|...| ::::|      .:||             
Mouse  2485 --FEGL-----------QRIILFTEDPRVFKVTYES-EKAEL------AELE------------- 2516

  Fly  3212 NAVRLVLDLEKAPNPMEFTNLVVRTPNKQRVTTQTWRFENGRLMCHANMCVQSRFGESGLKPNYE 3276
                :||.|:      :....:|....||.|                                  
Mouse  2517 ----VVLALQ------DVGISLVNNYTKQEV---------------------------------- 2537

  Fly  3277 AVVGRTEN----RASSSKQI---PIG-QHIVAQKLRPGSGQLELSTKMDGPISTIEICDIKIKQN 3333
            |.:|.|.:    .|...|:.   |:. :|  .:||.....:...::.::..:  :|:.:|.::  
Mouse  2538 AYIGITSSDVVWEAKPKKKARWKPMSVKH--TEKLEKEFREYTEASPLEDKV--VELDNIPVR-- 2596

  Fly  3334 SVFLTPDLLWMHASLNNRQITDKGKVSFVHEYLINVELVKGIGISIIARKPCEEIMFISLDHINC 3398
               |||       |.|:.:|.....:.....||                 |..::.:.:      
Mouse  2597 ---LTP-------SGNDMKILQPHVIPVRRNYL-----------------PALKVEYNT------ 2628

  Fly  3399 DIVQSALENSLDLNIAYIQIDNQLLDAVSPIALH--------TQTSNDLEETQNAVVLKLKMLPS 3455
                ||.::|..:.|..|||.||:..|:.|...:        |..|.....|..::|::     |
Mouse  2629 ----SAHQSSFRIQIYRIQIQNQIHGAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMR-----S 2684

  Fly  3456 PNKNAII-FKYLTLDLKPSTASLEEKLILKVASFLGYGKINRQNLSVQYQFENTDDKPFLQDMKR 3519
            ...:.|. .||..:.::....||:...:..:|..:...::.          |.|:.:.|.:|::.
Mouse  2685 AGHSQISRIKYFKVLIQEMDLSLDLGFVYALADLVTKAEVT----------EKTEVEHFHKDVEA 2739

  Fly  3520 Y----------------YFENLSIGATQVRLSAFTSS-------------KLPV-ELHETKKALG 3554
            :                .||...|...::.||...||             .:|| .|:...|::|
Mouse  2740 FEQEYEVVSSVDQSQVNLFEYFHISPIKLHLSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIG 2804

  Fly  3555 LTLIKFEDALIELDRYSDKLHFETMDVYRKELKKHYINQ-VKWHAAAILGSVDFLGNPLGFANDL 3618
            .||...:|.:.:|..:.....|.|....:.|:.:||..| :|.....||| :|.||||.|...:.
Mouse  2805 ATLTDVQDVVFKLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILG-LDVLGNPFGLIREF 2868

  Fly  3619 SEGVSGLIFE---GSV--------------KSLVKNVTHGISNSTAKLTETLSDSLGKVVLDDHD 3666
            ||||....:|   |::              |:||.....|::.:.:|:|..::..:..:.:|:..
Mouse  2869 SEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDY 2933

  Fly  3667 NETRQRILELQSNTSGGHLAAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLSGLGKGLVGTV 3731
            .:.|:..:..|.......:..|.|||..|.:.|:|.||.....||..:|..||..|:||||||.|
Mouse  2934 QQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAV 2998

  Fly  3732 TKPIIGVLDLASETASAVRETSRDSHRNAPERKRLPRCVTGAPGGLLPLYSNRQSKGQQYLYLIN 3796
            |:|..|::|:||.|...::..:..|.   .|..|.||...  ..|::..|..|...|.|.|.::.
Mouse  2999 TRPTGGIIDMASSTFQGIKRATETSE---VESLRPPRFFN--EDGVIRPYRLRDGSGNQMLQVME 3058

  Fly  3797 QKNFSE 3802
            ...|::
Mouse  3059 NGRFAK 3064

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13DNP_729825.2 Chorein_N 4..112 CDD:315323 38/107 (36%)
VPS13 147..368 CDD:318996 54/255 (21%)
VPS13_mid_rpt <656..837 CDD:318998 40/183 (22%)
VPS13 <2039..>2694 CDD:330393 140/762 (18%)
SHR-BD 2836..3113 CDD:310922 69/337 (20%)
VPS13 <3346..3802 CDD:330393 120/512 (23%)
Vps13aNP_766616.2 MRS6 4..>2005 CDD:227376 485/2854 (17%)
Chorein_N 4..113 CDD:289396 38/108 (35%)
VPS13 142..371 CDD:293513 54/256 (21%)
TPR 1. /evidence=ECO:0000255 212..245 6/32 (19%)
TPR 2. /evidence=ECO:0000255 373..406 6/36 (17%)
VPS13_mid_rpt 568..791 CDD:293515 57/343 (17%)
FFAT. /evidence=ECO:0000250|UniProtKB:Q96RL7 838..844 3/5 (60%)
VPS13_mid_rpt 1141..>1236 CDD:293515 28/188 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1343..1365 6/29 (21%)
TPR 3. /evidence=ECO:0000255 1806..1840 6/33 (18%)
TPR 4. /evidence=ECO:0000255 1999..2034 9/44 (20%)
SHR-BD 2202..2445 CDD:284143 66/332 (20%)
Required for mitochondrial localization. /evidence=ECO:0000250|UniProtKB:Q96RL7 2607..3166 117/506 (23%)
VPS13_C 2758..2935 CDD:293514 45/177 (25%)
ATG_C 2938..3017 CDD:286423 30/78 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4159at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

Return to query results.
Submit another query.