Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001342827.1 | Gene: | vps13a / 2540516 | PomBaseID: | SPBC21C3.01c | Length: | 3071 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 4159 | Identity: | 789/4159 - (18%) |
---|---|---|---|
Similarity: | 1395/4159 - (33%) | Gaps: | 1455/4159 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
Fly 66 LQIPVRQFRTSPWCISIEGLFCIICP--KNLDNWDYEKEKLQDLEYKLAVLDTAE---AGWRSEK 125
Fly 126 GKQMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQS 190
Fly 191 CDCDWTNGSYKMNNNEMN----YKLVELKELSVYWDLLHEDIKCQSYSNQEI---LEKMHSTCEL 248
Fly 249 R-SHNFIIKPICATAR--WKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQRLQMLDKLSEIR 310
Fly 311 QVKEVRQYRLKRPTCTVESNPIAWWKYATICHGFDFKKNEEKWL------MLKENLRYMLLYKSI 369
Fly 370 ILNPNENLSAADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNE---QGKNMLFHWFP 431
Fly 432 NWMGWYANSPSTPNNE----QDESLKHLED----DILVALENSLQ---NSSDLKSDAVFGHFSIK 485
Fly 486 LLKGLVILQTEDKLNDGRNKSMEMQFNNFSAYLQLSPQLTSYTVGISLQEVYLIDKTSSDTMHNY 550
Fly 551 LIKPQTGNTATPNQLV--KNAALQEDILFQLQYENCNHLRF-------------QLNIKSKGLDL 600
Fly 601 IYNEDAIQWLLDFLADSNSFKYSPRNRVAKKTDFMKNWNEMFSGNEVNRKIWMFEIEIFAPRIIF 665
Fly 666 LENYKVSNSLMVL-------LDFGKLEMRK---MEVKRVIPVIESAVTENTSDDDETYLTPCSTP 720
Fly 721 PASEKSGSESPTLL-------------------ENPKTESFLNKNVQLEYVLHNKIYDKYLINFT 766
Fly 767 NLQVLV-CKYEERWQACLKTSSNFHLIDKFNINLTLEQRNIFTVDPEYPSFMLFGTCPTILIHGN 830
Fly 831 EELINNCCNIMKPIIKASKEMENIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLVIEMQST- 894
Fly 895 --ERSIAELQIIGARAGLTKEPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSLSGS 957
Fly 958 LKHSAIVSPTSPGSPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIKIVPPNES 1022
Fly 1023 NSMQLHTTSITFNSLDIIANQDTIIEILNFAKRTLLAQNIFPSESPESPKEATEAPVD-VVDQVD 1086
Fly 1087 HKSHNEIF-----FDFFRLNILLLYTIKRDKFNVGRKVGTVTLTEAKINASFQSDLSIIGSLGGI 1146
Fly 1147 QVIDITSEAFCHPRILSVGRDQIL-RASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQS- 1209
Fly 1210 -HWSDKTTCTFQMRMASASYTHCPRFLRDVNACITYFKRSLREFATSIGNKATDMAKEFVQQVRA 1273
Fly 1274 VEQIGPVYPQ--RNRQDNWLDIIISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSD------ 1330
Fly 1331 -------EFNESYTIEIKNTYVYSLNIDEGEYSFNVHPAKNKDAIPILHDTAITLQLYAGYSDDN 1388
Fly 1389 DEDKQLNR------FSIK-GSMVEALKVS---------LNRKQYELLLESIRYATNFSNEVLNES 1437
Fly 1438 DELDQNGDIEPTANIDAESIISTTIQFSVPVFQINLQNEYHNDLINLTFKNF--NVKHISKGFDK 1500
Fly 1501 DVEVVLKSVLMEDLKSDLTSPFRNMVTSVDLEQKIKKNEMTS-SSCPDLPSYCNSLKNRSSSVPS 1564
Fly 1565 CFYNHMQVKVFGGDQKYTSSNKNELGKKKESQTLVIYKSHTGRSAQNGKLEQTSSIQFNCLNLAI 1629
Fly 1630 CVERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKH-------IDKVCSKLKVSIRSFNFTLIRNES 1687
Fly 1688 LLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLTKYGNIYKQKFLTSGTEALNFVYKKKLVDL 1752
Fly 1753 EALNTLDTDSTLRINMSAVHYIHTKRFSTELHVFVKDLLQLQTPVIRKLKKHGSEQNMRPSKMKL 1817
Fly 1818 VIQADSPVIVLPSSYNRNEVIIAYLGQFSLKNSFH--------FASDNNIISKMSATPSKDEI-L 1873
Fly 1874 DVMRIDLVNINLFSG--------ERSSMKAKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLE 1930
Fly 1931 RNLSADAHRVCPDISVQGTFSKLSGIINIQQYKLIRSFLNNNIGEQTDDIYMNYHNNSCTSIERL 1995
Fly 1996 STINLMPKNEVSKIVSILISIRILLEDVSLLLALNTSQSAAIEPLACIHFLKSTLEIDLFSDGSQ 2060
Fly 2061 DIDLISSNILIVDERNESDKSNENVFKNILEPSKKEVRIENSVQVEVHCRKKATFSKYTIMLNNM 2125
Fly 2126 RVFALLSFLDQLKSYLQEDSPAPVVNNAANQIA--------------QKPQIDTSISTEYVVNIT 2176
Fly 2177 DSEIIFAEECSRLDSNAIILKSTTVICYKPNSNIVPLSLDINHLEIFSCTLDAEEESALSIIDPF 2241
Fly 2242 TLIIELRSNCLNILIQKHLNIRLSYVDVKLFSRMARLLPT------QTSRPKNVISKAD---SDL 2297
Fly 2298 EKAAPLVAMGFEISDCLYAMQINNWRINDAAIWLSQQKQNTYRNPALEMKTAVVDASLISVFIID 2362
Fly 2363 DCMDADVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYSLGNIDTEVSVNYYNRRLSGWEPVAET 2427
Fly 2428 WESNLNWKYTKGHLD---NKKRFEIGISSKQMLKLNVTSTFIELFHMVLKNWTNDFNDNGAKNFR 2489
Fly 2490 QRSPF-------IPFALQNLSGTPLLFKPIYAPLGDLTRSDLQQVELIKNWYSVQPNETKTFDFS 2547
Fly 2548 QKSKLRHVHSHQLNLHQIFVQIH----GWTLIGPISVDKVGMFFRTTKLDSQFLTKSRIVFDISL 2608
Fly 2609 IGSAQKLIKVKSSLGVINKLDRNVFLKMTLKGTHSDGL--SSISVIKPNDELSVPLKFIDASLYV 2671
Fly 2672 AHNTSESDAYEDTGFSNEEILWKACGKD--DTRQLLAGYDTNKSILYTFVNISREIYHCKEQNLP 2734
Fly 2735 GH----KITLLPPLKINNMLCCDLMFKIHEHATGRINSSESVNIYNVNI--C---QPLNLS-ITL 2789
Fly 2790 DNFQLSGQLKIPVSHRGVIEPKLKLIDIQKRELHVRVSIQSVPGKGMELYIS------------- 2841
Fly 2842 -APVWIINKTGLPLI------YKQEGTSHTAAGQFEEHETARQVAPLMFSFSDQEGSPALVLRLG 2899
Fly 2900 KAYGSNNMWCK--SFSTHKDLADRDLRA-ENTKGSYAIGISVRRGRGLYACTTFVTLSPRFHLHN 2961
Fly 2962 RSGYKLEFMQLCDIVNYDRPDPRKIISAPVDCNFAFHWPNWDQEQII---------CVRIPEIEC 3017
Fly 3018 CCWSKGIPIKDVQSLYINVRNEWGEMFFLRLEIISKDAT-FILLFTDARTLPPPIRIDNCSEVVI 3081
Fly 3082 NFSQLRSKPVWIT------------PVRPQSSLSYVMDDPL-----------GQQILLMEAPGGN 3123
Fly 3124 MIEFPINNKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHRQLVLGVRGKKVVIVEKNSGDRSQL 3188
Fly 3189 WLMNSNGQLEHEGSTPPIQTNDANAVRLVLDLEKAPNPMEFTNLVVRTPNKQRVTTQTWRFENGR 3253
Fly 3254 LMCHANMCVQSRFGESGLKPNYEAVVGRTENRASSSKQIPIGQHIVAQKLRPGSGQLELSTKMDG 3318
Fly 3319 PISTIEICDIKIKQNSVFLTPDLLWMHASLNNRQITDKGKVSFVHEYLINVELVKGIGISIIARK 3383
Fly 3384 PCEEIMFISLDHINCDIVQSALENSLDLNIAYIQIDNQLLDAVSPIALH--------TQTSNDLE 3440
Fly 3441 ETQNAVVLKLKMLPSPNKNAIIFKYLTLDLKPSTASLEEKLILKVASFLGYGKINRQNLSVQYQF 3505
Fly 3506 ENT----DDKPFL------QDMKRYYFENLSIGATQVRLSAFTSSKL------PVELHET----K 3550
Fly 3551 KALGLTLIKFEDALIELDR-YSDKLHFETMDVYRKELKKHYINQVKWHAAAILGSVDFLGNPLGF 3614
Fly 3615 ANDLSEGVSGLIF---------EGSVK----------SLVKNVTHGISNSTAKLTETLSDSLGKV 3660
Fly 3661 VLDDHDNETRQRILELQSNTSGGHL----AAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLS 3721
Fly 3722 GLGKGLVGTVTKPIIGVLDLASETASAVRETSRDSHRNAPERKRLPRCVTGAPGGLLPLYSNRQS 3786
Fly 3787 KGQQYL-YLINQKNFSEKIISYEPNLWSDKEARLRLLVSTEYVRIFSLSDANPTIMFECHVSEI 3849 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 37/109 (34%) |
VPS13 | 147..368 | CDD:318996 | 56/236 (24%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 39/210 (19%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 109/693 (16%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 78/332 (23%) | ||
VPS13 | <3346..3802 | CDD:330393 | 132/508 (26%) | ||
vps13a | NP_001342827.1 | MRS6 | 1..2503 | CDD:227376 | 646/3566 (18%) |
MRS6 | <2316..3068 | CDD:227376 | 197/906 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 58 | 1.000 | Domainoid score | I3086 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.040 |