DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13D and vps13a

DIOPT Version :9

Sequence 1:NP_729825.2 Gene:Vps13D / 39448 FlyBaseID:FBgn0052113 Length:3919 Species:Drosophila melanogaster
Sequence 2:NP_001342827.1 Gene:vps13a / 2540516 PomBaseID:SPBC21C3.01c Length:3071 Species:Schizosaccharomyces pombe


Alignment Length:4159 Identity:789/4159 - (18%)
Similarity:1395/4159 - (33%) Gaps:1455/4159 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
            ||..|:..:||..||.|::||::.||::.:..|.|.|.|:.|:.:||....:|:|:|:|.|....
pombe     1 MLEGLVAGLLNKILGSYVDNLDTKQLNIGVWGGHVSLHNLRIKPEALDKLGIPIEITSGLIGTFT 65

  Fly    66 LQIPVRQFRTSPWCISIEGLFCIICP--KNLDNWDYEKEKLQDLEYKLAVLDTAE---AGWRSEK 125
            |:||....|.....|:||.::..|.|  ||....|..::..|.|  |...||:.|   ..:|...
pombe    66 LEIPWSNLRNKSLTINIEDIYLSIHPQAKNSLTRDELEQSQQAL--KQEQLDSFEILRKNFRETL 128

  Fly   126 GKQMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQS 190
            .:...:...|...::::|   :...:.|||::.|..:|.||||.:...:.....|:.:.||...|
pombe   129 EESSSNPNISRKQSFIEY---LIAKLTDNIQIYIERIHLRFEDNLSDLEKPYSLGLTLYSLRVTS 190

  Fly   191 CDCDWTNGSYKMNNNEMN----YKLVELKELSVYWDLLHEDIKCQSYSNQEI---LEKMHSTCEL 248
            .|..:|  .|.::.:.:.    :|::.:...|:||....|..||.  :.::|   |:.:..:.|.
pombe   191 TDASFT--EYLLSTDPIPSSCIHKIITVDYFSIYWISKCEISKCT--TTEDIFSYLKNLIPSAEK 251

  Fly   249 R-SHNFIIKPICATAR--WKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQRLQMLDKLSEIR 310
            . ::|:|:||:.|||.  ..|....|:::.:.|      |.|.|:.|.:|......:|..:...|
pombe   252 SPAYNYILKPLRATAHVVLFRHPTDQIMQLRGK------LSVEEISITLSDHMYYSLLGVIDYFR 310

  Fly   311 QVKEVRQYRLKRPTCTVESNPIAWWKYATICHGFDFKKNEEKWL------MLKENLRYMLLYKSI 369
            .|.:.:.|...||..|.:..|:.|:|||.:.......::...|.      ...:.:.||.:.:..
pombe   311 VVMKQQYYLQYRPKSTPKEKPLEWFKYAILVVKDSVHESRYHWTWKYFKRRRDDRIAYMHIIRKR 375

  Fly   370 ILNPNENLSAADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNE---QGKNMLFHWFP 431
            .|  ||.:|..:.:.:..||......||...|    .:|.|.  ..|.:|.   :.|....|...
pombe   376 YL--NEQISKEEIDLQKKIEKRNSTYDLIKYR----SRVHTS--LIEERNSIYLKPKTSAAHGLY 432

  Fly   432 NWMGWYANSPSTPNNE----QDESLKHLED----DILVALENSLQ---NSSDLKSDAVFGHFSIK 485
            :|...|...|.:.:.:    .|::...|.|    :...|:|.|.|   ::.:|..|....:..:.
pombe   433 DWFSGYIRKPQSQDEDTLASTDKTAADLTDQEQKEFFSAIEWSGQLYPDTVNLDPDMCMANVEVS 497

  Fly   486 LLKGLVILQTEDKLNDGRNKSMEMQFNNFSAYLQLSPQLTSYTVGISLQEVYLIDKTSSDTMHNY 550
            :.||..::|:.  :|......::.:|.:|:....:.||  |..:.:||:::.:.|..::..:.  
pombe   498 IAKGSFVIQSH--INGRVIPLIKQRFESFATECFIRPQ--SLKLKVSLKDLDMFDGITNPELE-- 556

  Fly   551 LIKPQTGNTATPNQLV--KNAALQEDILFQLQYENCNHLRF-------------QLNIKSKGLDL 600
                       |.:::  |.:..:.:.|.::......||.|             .|.:..:.|.:
pombe   557 -----------PARVIFAKPSVEESESLQKIPEAYRTHLFFLLLDTKPVYKASSTLIVHLRTLVI 610

  Fly   601 IYNEDAIQWLLDFLADSNSFKYSPRNRVAKKTDFMKNWNEMFSGNEVNRKIWMFEIEIFAPRIIF 665
            |||...|:.||.|..       .||.::    :.:..|                           
pombe   611 IYNRVCIESLLAFFV-------PPRTKI----EHVSEW--------------------------- 637

  Fly   666 LENYKVSNSLMVL-------LDFGKLEMRK---MEVKRVIPVIESAVTENTSDDDETYLTPCSTP 720
              .|..:..:|.|       ||:. |||.|   |.:....|:|  .|.|..:|            
pombe   638 --GYSAAAKVMTLARQTRASLDYA-LEMHKTSDMTIDLQAPLI--VVREECTD------------ 685

  Fly   721 PASEKSGSESPTLL-------------------ENPKTESFLNKNVQLEYVLHNKIYDKYLINFT 766
                   .:||||.                   :..|.:|....|.||:. |.|.:|||:.|:..
pombe   686 -------LKSPTLFLDVGRALVHTQLVDDAIIDKFRKLQSKKINNEQLKQ-LENLMYDKFTISLF 742

  Fly   767 NLQVLV-CKYEERWQACLKTSSNFHLIDKFNINLTLEQRNIFTVDPEYPSFMLFGTCPTILIHGN 830
            |::.|: ..||..|: ||....::|::.:.::::..|                            
pombe   743 NVRCLIGPDYETGWR-CLPKGCDYHILKECSLDINFE---------------------------- 778

  Fly   831 EELINNCCNIMKPIIKASKEMENIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLVIEMQST- 894
            ..::....|:.|  .|.|..|::                      :.::...|..::.|.|.|. 
pombe   779 ISILQKATNLTK--FKVSSHMKH----------------------AEIMFSDVQYKVFINMMSNI 819

  Fly   895 --ERSIAELQIIGARAGLTKEPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSLSGS 957
              ...:||:..                           ..|.|               :|:    
pombe   820 LPTLPVAEIPF---------------------------TYQQF---------------LDA---- 838

  Fly   958 LKHSAIVSPTSPGSPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIKIVPPNES 1022
                  |.|     |.|||                                        .|.|  
pombe   839 ------VKP-----PPFFD----------------------------------------APDN-- 850

  Fly  1023 NSMQLHTTSITFNSLDIIANQDTIIEILNFAKRTLLAQNIFPSESPESPKEATEAPVD-VVDQVD 1086
                   ..||..||...||::|..:        .:||.||          |....|| .:..:.
pombe   851 -------FQITHTSLGSHANENTAAQ--------FMAQQIF----------AFYFKVDYAICSLY 890

  Fly  1087 HKSHNEIF-----FDFFRLNILLLYTIKRDKFNVGRKVGTVTLTEAKINASFQSDLSIIGSLGGI 1146
            .:|.|.:.     |..|.:::::      .||:.        |..:|:|                
pombe   891 RRSENYLIPVVRAFTEFYIDLVV------RKFDY--------LVTSKLN---------------- 925

  Fly  1147 QVIDITSEAFCHPRILSVGRDQIL-RASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQS- 1209
               |:..:.|.:|..|.   |.:| |:|.:.|             ||:      |::..||:.| 
pombe   926 ---DLVIKEFTYPSSLC---DNVLVRSSPSPK-------------NNF------DDTVFISYTSI 965

  Fly  1210 -HWSDKTTCTFQMRMASASYTHCPRFLRDVNACITYFKRSLREFATSIGNKATDMAKEFVQQVRA 1273
             :.|.:....::....:.:.......|.......::....:|...||:.::.  |..|..:..|.
pombe   966 DYDSPELDSVYEGVRTTIAVVLSDLILNVEPTGFSFVYDFIRATFTSLNDEY--MIGEDPELTRK 1028

  Fly  1274 VEQIGPVYPQ--RNRQDNWLDIIISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSD------ 1330
            :..:..:.|:  ..|.|| :||.:                             ..||..      
pombe  1029 ISPVEGIIPEDANVRFDN-VDIFL-----------------------------YDCDQHFSTVCL 1063

  Fly  1331 -------EFNESYTIEIKNTYVYSLNIDEGEYSFNVHPAKNKDAIPILHDTAITLQLYAGYSDDN 1388
                   ||.|.:.::.:   .|.|.:.....|.|  |.|   .|..:.|..:.:..|..|    
pombe  1064 YSANMHMEFREKFFLQAR---FYDLEVKNHMKSNN--PPK---TIVKIDDNDLFIFKYESY---- 1116

  Fly  1389 DEDKQLNR------FSIK-GSMVEALKVS---------LNRKQYELLLESIRYATNFSNEVLNES 1437
            |..|.:::      :.|. ||:....:.|         |..|:::.|..|||||..:        
pombe  1117 DIPKDISKPTCDCVYDISFGSLTFYFQKSYFNAIYDFLLKLKRFQELFSSIRYAIYY-------- 1173

  Fly  1438 DELDQNGDIEPTANIDAESIISTTIQFSVPVFQINLQNEYHNDLINLTFKNF--NVKHISKGFDK 1500
                                                  :.:.:.::||:..|  .:||....|| 
pombe  1174 --------------------------------------KLYGNKVSLTYPKFELRIKHPKVYFD- 1199

  Fly  1501 DVEVVLKSVLMEDLKSDLTSPFRNMVTSVDLEQKIKKNEMTS-SSCPDLPSYCNSLKNRSSSVPS 1564
                   .||.|:         ||    ..::..:|.....: |.||.:.      ||...|:.|
pombe  1200 -------DVLDEE---------RN----CRMQLIVKPQSFYAFSKCPIVE------KNSKKSIFS 1238

  Fly  1565 CFYNHMQVKVFGGDQKYTSSNKNELGKKKESQTLVIYKSHTGRSAQNGKLEQTSSIQFNCLNLAI 1629
            |                      |: .|.|..|.|...||     .:..:|:      |.::|.:
pombe  1239 C----------------------EI-TKVEFHTAVPSSSH-----HDVLMEE------NNVHLDL 1269

  Fly  1630 CVERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKH-------IDKVCSKLKVSIRSFNFTLIRNES 1687
            ..:..||.    |........:..|..:.:.:.|       ||...:..:|....:....:|.| 
pombe  1270 TYDANYTT----GAYVFKATGDLDPVILNMCQSHHVIFWDLIDVATTFARVDSSFYTSENLRRE- 1329

  Fly  1688 LLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLTKYGNIYKQKFLTSGTEALNFVYKKKLVDL 1752
                                                     ..:.|..||| |....:.||.| :
pombe  1330 -----------------------------------------LDKAFDRSGT-AAKLKHPKKTV-V 1351

  Fly  1753 EALNTLDTDSTLRINMSAVHYIHTKRFSTELHVFVKDLLQLQTPVIRKLKKHGSEQNMRPSKMKL 1817
            |.|:.|.|.:...|.::    :||..|    .:...||.||.:                      
pombe  1352 ETLDILTTFNLPEIRLN----VHTDDF----WIHGGDLTQLHS---------------------- 1386

  Fly  1818 VIQADSPVIVLPSSYNRNEVIIAYLGQFSLKNSFH--------FASDNNIISKMSATPSKDEI-L 1873
                                |:::.| |||..:|:        |:.|:  |......|..:.: |
pombe  1387 --------------------ILSFFG-FSLDYNFYSSGRCYAEFSIDS--IQLKDCNPQDNVVFL 1428

  Fly  1874 DVMRIDLVNINLFSG--------ERSSMKAKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLE 1930
            ||:.....:..|.:|        .|.::....|..|   |..::|:|     :...|.|:|.   
pombe  1429 DVLEYSENHNRLVNGCLEYDSQNPRYNLVLDIDSPK---IFVNLNYL-----YSIWSIFVHW--- 1482

  Fly  1931 RNLSADAHRVCPDISVQGTFSKLSGIINIQQYKLIRSFLNNNIGEQTDDIYMNYHNNSCTSIERL 1995
                   ||        ..:|.|..:..: :|.::.:...|..||::   |..|           
pombe  1483 -------HR--------AYYSHLDYLTEV-EYFIMGNPNQNACGEES---YWYY----------- 1517

  Fly  1996 STINLMPKNEVSKIVSILISIRILLEDVSLLLALNTSQSAAIEPLACIHFLKSTLEIDLFSDGSQ 2060
                                 ||...|::||                  |.::..:.:|:|    
pombe  1518 ---------------------RITFVDMTLL------------------FFRNVSDANLYS---- 1539

  Fly  2061 DIDLISSNILIVDERNESDKSNENVFKNILEPSKKEVRIENSVQVEVHCRKKATFSKYTIMLNNM 2125
             :.:....:||..:                                         |.:.:..|||
pombe  1540 -LPMFFGELLITQQ-----------------------------------------SIFAVTANNM 1562

  Fly  2126 RVFALLSFLDQLKSYLQEDSPAPVVNNAANQIA--------------QKPQIDTSISTEYVVNIT 2176
            ::.|               .|.....|.:||:|              .|.||        :.|||
pombe  1563 KINA---------------CPLSETANISNQLADPFGFRYTYSQHTVNKIQI--------ITNIT 1604

  Fly  2177 DSEIIFAEECSRLDSNAIILKSTTVICYKPNSNIVPLSLDINHLEIFSCTLDAEEESALSIIDPF 2241
                        ||.::.:|::|                                      ::.|
pombe  1605 ------------LDFDSFVLRTT--------------------------------------VNDF 1619

  Fly  2242 TLIIELRSNCLNILIQKHLNIRLSYVDVKLFSRMARLLPT------QTSRPKNVISKAD---SDL 2297
            ..        |..:::|..|...:..||          ||      :.::...:.:..|   ..:
pombe  1620 LF--------LQTILRKIYNFYYALYDV----------PTTDVELLKRTKDDQLATNPDFLQLSV 1666

  Fly  2298 EKAAPLVAMGFEISDCLYAMQINNWRINDAAIWLSQQKQNTYRNPALEMKTAVVDASLISVFIID 2362
            :...|....|..|....:.:.::..|:    :.:||..                           
pombe  1667 DTGQPSSVFGIRICKEEFLLTVDGIRL----LVISQLH--------------------------- 1700

  Fly  2363 DCMDADVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYSLGNIDTEVSVNYYNRRLSGWEPVAET 2427
                 |:|||.:::..|.::....:.:.|           .|...|:.:|:||...|.|||..|.
pombe  1701 -----DLPLLNINIKPFQVDLNDWSSELN-----------SNAHLELFMNFYNFSNSHWEPFLEP 1749

  Fly  2428 WESNLNWKYTKGHLD---NKKRFEIGISSKQMLKLNVTSTFIELFHMVLKNWTNDFNDNGAKNFR 2489
            |:..:       |:.   |..:..:.:.|::.|.|.:|...||..|.   .:|...:        
pombe  1750 WKVGV-------HISRNPNTSKTAVHVFSREKLDLVITPQLIETLHF---GFTKVIS-------- 1796

  Fly  2490 QRSPF-------IPFALQNLSGTPLLFKPIYAPLGDLTRSDLQQVELIKNWYSVQPNETKTFDFS 2547
              :||       .|:.:.|.:|..:   .::|...:...|.::.:|         .||...:.|.
pombe  1797 --TPFPIEFKCDAPYRIHNYTGHAV---SVWADFENAADSCVRHLE---------NNEETDWKFE 1847

  Fly  2548 QKSKLRHVHSHQLNLHQIFVQIH----GWTLIGPISVDKVGMFFRTTKLDSQFLTKSRIVFDISL 2608
            :..:::.|.....:  :.::..|    .|..:..:.|::||..........|...|..:|.|::|
pombe  1848 EWRQMQDVVKQDQD--RSYIGFHFENSKWESLRHVRVNRVGEHIYPLISYDQDELKHYMVVDVNL 1910

  Fly  2609 IGSAQKLIKVKSSLGVINKLDRNVFLKMTLKGTHSDGL--SSISVIKPNDELSVPLKFIDASLYV 2671
            .....|.|.::|.|.:||:..    :::.:....|||:  |.|..:.|.:..|:|::  .|..|.
pombe  1911 GEDYIKHITLRSPLLLINETQ----MEIDVVFCDSDGIQRSQIYHMSPEESCSLPIE--TAYYYS 1969

  Fly  2672 AHNTSESDAYEDTGFSNEEILWKACGKD--DTRQLLAGYDTNKSILYTFVNISREIYHCKEQNLP 2734
            .|....|:.  ...:::|.|.|    ||  |.:|.|.....:.:...|...........|.|.:.
pombe  1970 IHIRPVSEF--KFNWTSEAISW----KDLVDNKQSLVTCQHSDNTFSTPACRFAANAELKSQTIS 2028

  Fly  2735 GH----KITLLPPLKINNMLCCDLMFKIHEHATGRINSSESVNIYNVNI--C---QPLNLS-ITL 2789
            .|    .||:...|::.|:|..||..:|.:      ...|.|.:.||.|  |   ..:|:| :.|
pombe  2029 NHYPFMHITISALLEVKNLLPIDLNIRIID------KDQEGVWMSNVGIGECAYVHSINISHVLL 2087

  Fly  2790 DNFQLSGQLKIPVSHRGVIEPKLKLIDIQKRELHVRVSIQSVPGKGMELYIS------------- 2841
            ...:.|....:|.|...:|...    ..|:|:.::.:::|.  |:...|.:|             
pombe  2088 LQAESSESHYLPSSLATIITND----SAQERDEYMTITLQG--GRKTRLGLSYTEKYPGIYHIEI 2146

  Fly  2842 -APVWIINKTGLPLI------YKQEGTSHTAAGQFEEHETARQVAPLMFSFSDQEGSPALVLRLG 2899
             :|..||||:|..|.      |.:...|..:....|:    .:|.|.|||:|...||....||  
pombe  2147 FSPYIIINKSGSFLFVGPKNDYNRISFSSASLSSGED----GKVVPCMFSYSHNYGSRRCRLR-- 2205

  Fly  2900 KAYGSNNMWCK--SFSTHKDLADRDLRA-ENTKGSYAIGISVRRGRGLYACTTFVTLSPRFHLHN 2961
               ..|:.|.:  ||.....:.:.:|.: |:....|.:||.|..|...|:.|..||::.||.:.|
pombe  2206 ---ADNSNWSEPVSFDAIGSVFEVELPSKEDHNKVYRLGIFVETGPDGYSKTNIVTITSRFIVRN 2267

  Fly  2962 RSGYKLEFMQLCDIVNYDRPDPRKIISAPVDCNFAFHWPNWDQEQII---------CVRIPEIEC 3017
            ::.:.|                  :|:.|.:...|...|  :.|:.:         .:::...:|
pombe  2268 KTRWSL------------------VIAEPYNDFIAEIAP--EGEEFLTYLRKHSHPMLKLSSSDC 2312

  Fly  3018 CCWSKGIPIKDVQSLYINVRNEWGEMFFLRLEIISKDAT-FILLFTDARTLPPPIRIDNCSEVVI 3081
            ..||....|:::.|.::.:....||. .|||||:.|:|| ||.:|.:  |...|..|.|.|.|::
pombe  2313 YLWSSSFYIEEIGSTHVRLMTSEGEK-LLRLEIVIKNATIFISIFEE--TGDWPYYIKNESGVLL 2374

  Fly  3082 NFSQLRSKPVWIT------------PVRPQSSLSYVMDDPL-----------GQQILLMEAPGGN 3123
            .|.|:  .|:..:            .:.|.|.:.|..|.|.           .|:.|...|..|.
pombe  2375 KFWQV--NPIDASEGKNNTALLKYHDIPPHSEVKYSWDYPCCANKEIALCYGDQKCLTTLAEIGP 2437

  Fly  3124 MIEFPINNKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHRQLVLGVRGKKVVIVEKNSGDRSQL 3188
            :..|...:.:|      .|.||                 .|.:|  ..|...:::.|:       
pombe  2438 LSPFKFTDASN------NTKFI-----------------SRDIV--ANGLSKILILKD------- 2470

  Fly  3189 WLMNSNGQLEHEGSTPPIQTNDANAVRLVLDLEKAPNPMEFTNLVVRTPNKQRVTTQTWRFENGR 3253
                               .:.:.|||                                      
pombe  2471 -------------------YDPSKAVR-------------------------------------- 2478

  Fly  3254 LMCHANMCVQSRFGESGLKPNYEAVVGRTENRASSSKQIPIGQHIVAQKLRPGSGQLELSTKMDG 3318
                              ||...:.|. ||.|..:.:|...|              ::||.|.  
pombe  2479 ------------------KPKIYSKVS-TEERDFNLEQFDSG--------------IDLSVKF-- 2508

  Fly  3319 PISTIEICDIKIKQNSVFLTPDLLWMHASLNNRQITDKGKVSFVHEYLINVELVKGIGISIIARK 3383
                                                                |::|||||::.|.
pombe  2509 ----------------------------------------------------LLEGIGISLVERN 2521

  Fly  3384 PCEEIMFISLDHINCDIVQSALENSLDLNIAYIQIDNQLLDAVSPIALH--------TQTSNDLE 3440
             .:|:.:::...||.....|.|..:..|::.:|||||||...:.||.|:        |...|.|.
pombe  2522 -TQELAYLTFHGINLFFTDSHLIRTFKLDVRWIQIDNQLYGGIYPIILYPSILSQEDTMNDNSLL 2585

  Fly  3441 ETQNAVVLKLKMLPSPNKNAIIFKYLTLDLKPSTASLEEKLILKVASFLGYGKINRQNLSVQYQF 3505
            .|.:::|..:|   :........||.|:.|:..|..::|........::        ..||....
pombe  2586 PTFHSMVAVVK---NDTYGVTYVKYATILLQELTIEIDEDFAFAALEYI--------KDSVPRSK 2639

  Fly  3506 ENT----DDKPFL------QDMKRYYFENLSIGATQVRLSAFTSSKL------PVELHET----K 3550
            .||    ||...|      .|:| .|||.|::..|::.||...:.::      .|..|..    .
pombe  2640 RNTGKMFDDSLELVPENLGNDLK-VYFEVLNLQPTEMHLSFVRTERINNTDGTVVSSHNPFVFFV 2703

  Fly  3551 KALGLTLIKFEDALIELDR-YSDKLHFETMDVYRKELKKHYINQVKWHAAAILGSVDFLGNPLGF 3614
            ..|.:.:....||.:.|:. ..|..|.....:: :.:|.||..::......|:||.||||||:|.
pombe  2704 NVLSMAIGNINDAPVRLNALLMDNAHVSLRRLF-ELVKNHYSQELLSQVHKIVGSADFLGNPVGL 2767

  Fly  3615 ANDLSEGVSGLIF---------EGSVK----------SLVKNVTHGISNSTAKLTETLSDSLGKV 3660
            ...::.|.:.:.:         |||.:          |.:|....||::|.:|:|.|:|.||..:
pombe  2768 FTTITSGFADIFYEPFHGFILNEGSYELGIGFAKGTASFIKKAVFGITDSISKVTGTISRSLSVI 2832

  Fly  3661 VLDDHDNETRQRILELQSNTSGGHL----AAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLS 3721
            .||. ..::|:|...:::...  |:    .||...|..|:..||..:......||..:|:||.:.
pombe  2833 TLDP-KFQSRRRAARIRNRPV--HILYGVTAGAASLYTGVRSGVRGLALQPIIGARRNGLPGLVK 2894

  Fly  3722 GLGKGLVGTVTKPIIGVLDLASETASAVRETSRDSHRNAPERKRLPRCVTGAPGGLLPLYSNRQS 3786
            ||||||||..|||::|:.|.||..:...|.|:........|:.||.|.:  :..|::..:..|::
pombe  2895 GLGKGLVGFTTKPLVGLFDFASSISEGARNTTTVFDERHIEKLRLSRLM--SDDGVVYPFQLREA 2957

  Fly  3787 KGQQYL-YLINQKNFSEKIISYEPNLWSDKEARLRLLVSTEYVRIFSLSDANPTIMFECHVSEI 3849
            .||.:| :|.|.:.|.:   .|:.::..:.    ::||.....||..:.........|.|:|::
pombe  2958 LGQYWLKHLDNGRYFKD---FYKAHIIIEN----KVLVILTNNRILFVQPQQLNCKKEIHLSKV 3014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13DNP_729825.2 Chorein_N 4..112 CDD:315323 37/109 (34%)
VPS13 147..368 CDD:318996 56/236 (24%)
VPS13_mid_rpt <656..837 CDD:318998 39/210 (19%)
VPS13 <2039..>2694 CDD:330393 109/693 (16%)
SHR-BD 2836..3113 CDD:310922 78/332 (23%)
VPS13 <3346..3802 CDD:330393 132/508 (26%)
vps13aNP_001342827.1 MRS6 1..2503 CDD:227376 646/3566 (18%)
MRS6 <2316..3068 CDD:227376 197/906 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 58 1.000 Domainoid score I3086
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16166
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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