Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_150648.2 | Gene: | VPS13A / 23230 | HGNCID: | 1908 | Length: | 3174 | Species: | Homo sapiens |
Alignment Length: | 4082 | Identity: | 743/4082 - (18%) |
---|---|---|---|
Similarity: | 1431/4082 - (35%) | Gaps: | 1291/4082 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
Fly 66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEKEKLQDLEYKLAVLDTAEAGWRSEKGKQ-- 128
Fly 129 --MESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQSC 191
Fly 192 DCDWTNGSYKMNNNEMNYKLVELKELSVYWDLLHEDIKCQSYSNQEILEKMHSTCELRS------ 250
Fly 251 -----HNFIIKPICATARWKRDKCQQVIRTKD----KPRVSCELLVPEVVIDISKVQRLQMLDKL 306
Fly 307 SEIRQVKEVRQYRLKRPTCTVESNPIAWWKYATICHG-FDFKKNEEKWLMLKENLR--------Y 362
Fly 363 MLLYKSIILN---PNENLSAADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQN----E 420
Fly 421 QGKNMLFHWFPNWMGWYANSPSTPNNEQDESLKHLEDDILVALENSLQNSSDLKSDAVFGHFSIK 485
Fly 486 L---------LKGLVILQTEDKLNDGRNKSMEMQFNNFSAYLQLSPQLTSYTVGISLQEVYLIDK 541
Fly 542 TSSDTMHNYLIKPQTGNTATPNQLVKNAALQEDI-LFQLQYENCNHLRFQLN----IKSKGLDLI 601
Fly 602 YNEDAIQWLLDFLADSNSFKYSPRNRVAKKTDFMKNWNEMFSGNEVNRKIWMFEIEIFAPRIIFL 666
Fly 667 E-NYKVS------------NSLMVLLDFGKLEMRKMEVKRVIPVIESAVTENTSDDDETYLTPCS 718
Fly 719 TPPASEKSGSESPTLLENPKTESFLNKNVQLEYVLHNKIYDKYLINFTNLQVLVCKYEERWQACL 783
Fly 784 KTS-SNFHLIDKFNINLTLEQRNIFTVDPEYPSFMLFGTCPTILIHGNEELINNCCNIMKPIIKA 847
Fly 848 SKEMENIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLVIEMQSTERSIAELQIIGARAGLTK 912
Fly 913 EPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSLSGSLKHSAIVSPTSPGSPNFFDR 977
Fly 978 ATSPHMITKAVQNIKMGDRSTEFCDDEDSTALISVDIKIVPPNESNSMQLHTTSITFNSLDIIAN 1042
Fly 1043 QDTIIEILNFAKRTLLAQNIFPSESPESPKEATEAPVDVVDQVDHKSHNEIFFDFFRLNILLLYT 1107
Fly 1108 IKRDKFNVGRKVGTVTLTEAKINASFQSDLSIIGSLGGIQVIDITSEAFCHPRILSVGRDQILRA 1172
Fly 1173 SDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMRMASASYTHCPRFLRD 1237
Fly 1238 VNACITYFKRSLREFATSIGNKATD-MAKEFVQQVRAVEQIGPVYPQRNRQDNWLDIIISSPIII 1301
Fly 1302 LPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEIKNTYVYSLNIDEGEYSFNVHPAKNKD 1366
Fly 1367 AIPILHDTAITLQLYAGYSDDNDEDKQLNRFSIKGSMVE--ALKVSLNRKQYELLLESIRYATNF 1429
Fly 1430 SNEVLNESDELDQNGDIEPTANIDAESIISTTIQFSVPVFQINLQNEYHNDLINLTFKNFNVKHI 1494
Fly 1495 SKGFDKDVEVVLKSVLMEDLKSDLTSPFRNMVTSVDLEQKIKKNEMTSSSCPDLPSYCNSLKNRS 1559
Fly 1560 SSVPSCFYNHMQVKVFGGDQKYTSSNKNELGKKKESQTLVIYKSHTGRSAQNGKLEQTSSIQFNC 1624
Fly 1625 LNLAICVERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKHIDKVCSKLKVSIRSFNFTLIRNESLL 1689
Fly 1690 SRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLTKYGNIYKQKFLTSGTEALNFVYKKKLVDLEA 1754
Fly 1755 LNTLDTDSTLR-INMSAVHYIHTKRFSTELHVFVKDLLQLQTPVIRKLKKHGSEQNMRPSKMKLV 1818
Fly 1819 IQADSPVIVLPSSYNRNEVIIAYLGQFSLKNSFHFASDNNIISKMSATPSKDEILDVMRIDLVNI 1883
Fly 1884 NLFSGERSSMKAKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLERNLSADAHRVCPDISVQG 1948
Fly 1949 TFSKLSGIINIQQYKLIRSFLNNNIGEQTD---------DIY---------MNYHNNSCTSIERL 1995
Fly 1996 STINLMPKNEVSKIVSILISIRILLEDVSLLLALNTSQSAAI----EP-LACIHF----LKSTLE 2051
Fly 2052 IDLFSDGSQDIDLISSNILIVDERNESDKSNENVFKNILEPSKKEVRIENSVQVEVHCRKKATFS 2116
Fly 2117 KYTIMLNNMRVFALLSFLDQLKS-YLQEDSPAPVVNNAANQIAQKPQIDTSISTEYVVN--ITDS 2178
Fly 2179 EIIFAEECSRLDSNAIILKSTTVICYKPNSNIVPLSLDINHLEIFSCT-LDAEEESAL-SIIDPF 2241
Fly 2242 TLIIELRS-----NCLNILIQKHLNIRLSYVDVK-LFSRMARLLPTQTSRPKNVISKADSDLEKA 2300
Fly 2301 APLVAMGFEISDCLYAMQINNWRINDA---AIWLSQQKQNTYR-NPALEM--KTAVVDASLISVF 2359
Fly 2360 IIDDCMDA-----DVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYSLGNIDTEVSVNYYNRRLS 2419
Fly 2420 GWEPVAETWES---------NLNWKYTK----------GHLDNKK----RFEIGISSKQMLKLNV 2461
Fly 2462 TSTFIELFHMVLKNWTNDFNDNGAKNFRQRSPFIPFALQNLSGTPLLFKPIYAPLGDLTRSD--- 2523
Fly 2524 LQQVELIKNWYSVQPNETKTFDFSQKSKLRHVHSHQLNLHQIFVQIHGWTLIGPI---SVDKVGM 2585
Fly 2586 FFRTTKLDSQFLT--------KSRIVFDISLIGSAQKLIKVKSSLGVIN--KLDRNVFLKMTLKG 2640
Fly 2641 THSDGLSSISVIKPNDELSVPLKFIDASLYVAHNTSESDAYE-DTGFSNEEILWKACGKDD---- 2700
Fly 2701 TRQLLAGYDTNKSILYTFV----NI-SREIYHCKEQNLPGHKITLLPPLKINNMLCCDLMFKIHE 2760
Fly 2761 HATGRINS----SESVNIYNVNICQPLNLSITLDNFQLSGQLKIPVSHRGVIEPKLK-------- 2813
Fly 2814 -----LIDIQKRELHVRVSIQSVPGKGMELYISAPVWIINKTGLPLIYKQEGTSHTAAGQFEEHE 2873
Fly 2874 TARQVAPLMFSFSDQE--GSPALVLRLGKAYGSNNMWCKSFSTHKDLADRDLRAENTKGSYAIGI 2936
Fly 2937 SVRRGRGLYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNYDRPDPRKIISAPVDCNFAFHWPN 3001
Fly 3002 WDQEQIICVRIPEIECCCWSKGIPIKDV------QSLYINVRNEWGEMFFLRLEIISKDATFILL 3060
Fly 3061 FTD----ARTLPPPIRIDNCSEVVINFSQLRSKPVWITPVRPQSSLSYVMDDPLGQQIL------ 3115
Fly 3116 -----------LMEAPGGNMIEFPINNKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHRQLVLG 3169
Fly 3170 VRGKKVVIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDANAVRLVLDLEKAPNPMEFTNLVV 3234
Fly 3235 RTPNKQRVTTQTWRFENGRLMCHANMCVQSRFGESGLKPNYEAVVGRTENRASSSKQIPIGQHIV 3299
Fly 3300 AQKLRPGSGQLELSTKMDGPISTIEICDIKIKQNSVFLTPDLLWMHASLNNRQITDKGKVSFVHE 3364
Fly 3365 YLINVELVKGIGISIIARKPCEEIMFISLDHINCDIVQSALENSLDLNIAYIQIDNQLLDAVSPI 3429
Fly 3430 ALHTQTSNDLEETQNAVVLKLKMLPSPNKNAIIFKYLTLDLKPSTASLEEKLILKVA-----SFL 3489
Fly 3490 GYGKINRQNLSVQYQF----------------ENTDDKPFLQDMKRY------------------ 3520
Fly 3521 -YFE----------NLSIGATQVRLSAFTSSKLPV-ELHETKKALGLTLIKFEDALIELDRYSDK 3573
Fly 3574 LHFETMDVYRKELKKHYINQ-VKWHAAAILGSVDFLGNPLGFANDLSEGVSGLIFE---GSV--- 3631
Fly 3632 -----------KSLVKNVTHGISNSTAKLTETLSDSLGKVVLDDHDNETRQRILELQSNTSGGHL 3685
Fly 3686 AAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLSGLGKGLVGTVTKPIIGVLDLASETASAVR 3750
Fly 3751 ETSRDSHRNAPERKRLPRCVTGAPGGLLPLYSNRQSKGQQYLYLINQKNFSE 3802 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 36/107 (34%) |
VPS13 | 147..368 | CDD:318996 | 54/244 (22%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 38/194 (20%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 138/721 (19%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 54/288 (19%) | ||
VPS13 | <3346..3802 | CDD:330393 | 119/524 (23%) | ||
VPS13A | NP_150648.2 | MRS6 | 4..>2104 | CDD:227376 | 516/2898 (18%) |
Chorein_N | 4..113 | CDD:289396 | 36/108 (33%) | ||
VPS13 | 142..371 | CDD:293513 | 54/245 (22%) | ||
TPR 1 | 212..245 | 7/40 (18%) | |||
TPR 2 | 373..406 | 7/37 (19%) | |||
TPR 3 | 537..575 | 12/44 (27%) | |||
VPS13_mid_rpt | 570..793 | CDD:293515 | 52/280 (19%) | ||
FFAT. /evidence=ECO:0000269|PubMed:30741634 | 842..848 | 2/26 (8%) | |||
VPS13_mid_rpt | 1156..>1266 | CDD:293515 | 38/168 (23%) | ||
TPR 4 | 1256..1289 | 11/41 (27%) | |||
TPR 5 | 1291..1320 | 7/28 (25%) | |||
TPR 6 | 2009..2041 | 9/44 (20%) | |||
SHR-BD | 2209..2452 | CDD:284143 | 51/283 (18%) | ||
TPR 7 | 2568..2601 | 8/48 (17%) | |||
Required for mitochondrial localization. /evidence=ECO:0000269|PubMed:30741634 | 2615..3174 | 117/518 (23%) | |||
VPS13_C | 2766..2943 | CDD:293514 | 44/177 (25%) | ||
ATG_C | 2946..3025 | CDD:286423 | 29/78 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |