Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_740900.1 | Gene: | T08G11.1 / 172705 | WormBaseID: | WBGene00011629 | Length: | 3212 | Species: | Caenorhabditis elegans |
Alignment Length: | 4142 | Identity: | 747/4142 - (18%) |
---|---|---|---|
Similarity: | 1382/4142 - (33%) | Gaps: | 1437/4142 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
Fly 66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEK--EKLQDLEYK-LAVLDTAEAGWRSEKGK 127
Fly 128 QMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQSCD 192
Fly 193 CDWTNGSYKMNNNEMNYKLVELKELSVYWDLLHE---DIKCQSYSNQEILEKMHSTCE-LRSHNF 253
Fly 254 IIKPICATARWKRDKCQQVIRTKDK-PRVSCELLVPEVVIDISKVQRLQMLDKLSEIRQVKEVRQ 317
Fly 318 YRLKRPTCT-VESNPIAWWKYA---TICHGFDFKKNEEKWLMLKENLRYMLLYKSIIL------N 372
Fly 373 PNENLSAADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNEQGKNMLFHWFPNWMGWY 437
Fly 438 ANSPSTPNNEQ---------DESLKHLEDDILVALENSLQN--SSDLKSDAVFGHFSIKLLKGLV 491
Fly 492 ILQTEDKLNDGRNKSMEMQFNNFSAYLQLSPQLTSYTVGISLQEVYLIDKTSSDTMH-------- 548
Fly 549 -NYLI--KPQTGNTATPNQLVKNAALQEDILFQLQYENCNHLRFQLNIKSKGLDLIYNEDAIQWL 610
Fly 611 LDFLADSNSFKYSPRNRVAKKTDFMKNWNEMFSGNEV-------NRKIWMFEIEIFAPRIIFLEN 668
Fly 669 YKVSNSLMVLL-DFGKLEMRKMEVKRVIPVIESAVTENTSDDDETYLTPCSTPPASEKSGSESPT 732
Fly 733 LLENPKTESFLNKNVQLEYVLHNKIYDKYLINFTNLQVLVCKYEERWQACL-KTSSNFHLIDKFN 796
Fly 797 INLTLEQRNIFTVDPEYPSFMLFGTCPTILIH-GNEELINNCCNIMK-----PI------IKASK 849
Fly 850 EME--------------------------NIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLV 888
Fly 889 IEMQSTERSIAELQIIGARAGL---------TKEPHETNISMSVHGLLLVDAIQSFGPDFELLVA 944
Fly 945 SHRH---VGMDSLSGSLKHSAIVSPTSPGSPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDS 1006
Fly 1007 TALISVDIKIVPPNESNSMQLHTTSITFNSLDIIANQDTIIEILNFAKRTLLAQNIFPSESPESP 1071
Fly 1072 KEATEAPVDVVDQVDHKSHNEIFFDFFRLNILLLYTIKRDKFNVGRKVGTVTL-------TEAKI 1129
Fly 1130 NASF-----------------------------QSDLSIIGSLGGIQVIDITSEAFCHPRILSV- 1164
Fly 1165 GRDQILRASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMRMASASYT 1229
Fly 1230 HCPRFLRDVNACITYFKRSLREFATSIGNKATDMAKEFVQQVRAVEQIGPVYPQRNRQDNWLDII 1294
Fly 1295 ISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEIKNTYVYSLNIDEGEYSFNV 1359
Fly 1360 HPAKNKDAIPILHDTAITLQLYAGYSDDNDEDKQLNRFSIKGSMVEALKVSLNRKQYELLLESIR 1424
Fly 1425 YATNFSNEVLNESDELDQNGDIEPTANIDAESIISTTIQFSVPVFQINLQNEYHNDLINLTFKNF 1489
Fly 1490 NVKHISKGFDK-DVEVVLKSVLME----DLKSDLTSPFRNMVTSVDLEQKIKKNEMTSSSCPDLP 1549
Fly 1550 SYCNSLKNRSSSVPSCFYNHMQVKVFGGDQKYTSSNKNELGKKKESQT--LVIYKSHTGRSAQNG 1612
Fly 1613 KLEQTSSIQFNCLNLAICVERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKHIDKVCSKLKVSIRS 1677
Fly 1678 FNFTLIRNESLLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLTKYGNIYKQKFLTSGTEALN 1742
Fly 1743 FVYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTKRFSTELHVFVKDLLQLQTPVIRKLKKHGSE 1807
Fly 1808 QNMRPSKMKLVIQADSPVIVLPSSYNRNEVIIAYLGQFSLKNSFHFASDNNIISKMSATPSKDEI 1872
Fly 1873 LDVMRIDLVNINLFSGERSSMKAKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLERNLSADA 1937
Fly 1938 HRVCPDISVQGTFSKLSGIINIQQYKLIRSFLNNNIGEQTDDIYMNYHNNSCTSIERLSTINLMP 2002
Fly 2003 KNEVSKIVSILISIRILLEDVSLLLALNTSQSAAIEPLACIHFLKSTLEIDLFSDGSQDIDLISS 2067
Fly 2068 NILIVDERNESDKSNENVFKNILEPSKKEVRIEN-SVQVEVHCRKKATFSKYTIMLNNMRVFALL 2131
Fly 2132 SFLDQLKSYLQEDSPAPVVNNAANQIAQKPQIDTSISTEYVVNITDSEIIFAEECSRLDSNAIIL 2196
Fly 2197 KSTTVICYKPNSNIVPLSLDINHLEIFSCTLDAEEESALSIIDPFTLIIELRSNCLNILIQKHLN 2261
Fly 2262 IRLSYVDVKLFSRMARLLPTQTSRPKNVISKADSDLEKAAPLVAMGFEISDCLYAMQINNW---- 2322
Fly 2323 ---RINDAAIW-----LSQ----------QKQNTYRNPALEMKTAVVDASLISVFIIDDCMDADV 2369
Fly 2370 PLLEVSLSKFLLNFTFQTQDPNPKETNIRHY---SLGNIDTEVSV--NYYNRRLSGWEPVAETWE 2429
Fly 2430 SNL----NWKYT--------KGHLDNKKRFEIGISSKQMLKLNVTSTFIELFHMVLKNWTNDFND 2482
Fly 2483 NGAKNFRQRSP--------FIPFALQNLSGTPLLFKPIYAPLGDLTRSDLQQVELIKNWYSVQPN 2539
Fly 2540 ETKTFDFSQKSKLRHVHSHQLNLHQIFVQIHG---WTLIGPISVDKVGMFFRTTKLDSQFLTKSR 2601
Fly 2602 I--------VFDISLIGSAQKLIKVKSSLGVINKLDRNVFL------KMTLKGT--HSDGLSSIS 2650
Fly 2651 VIKPNDELSVPLKFI-DASLYVAHNTSESDAYEDTGFSNEEILWK----------ACGKDDTRQL 2704
Fly 2705 LAGYDTNKSILYTFVNISRE------------IYHCKEQNLPGHKITLLPPLKINNMLCCDLMFK 2757
Fly 2758 IHEHATGRINSSESVNIYNVNICQPLNLSITLDNFQLSGQLKIPVSHRGVIEPKLKLIDIQKREL 2822
Fly 2823 HVRVSIQSVPGK--------------GMELYISAPVWIINKTGLPLIYKQEG---TSHTAAG--- 2867
Fly 2868 -------QFEEHETARQ----VAPLMFSFSDQEGSPALVLRLGK----AYGSNNMWCKSFSTHKD 2917
Fly 2918 LADRDLRAENTKGS---YAIGISVRRGR-GLYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNY 2978
Fly 2979 DRPDPRK-IISAPVDCNFAFHWP-NWDQEQIICVRI---PEIECCCWSKGIPI---------KDV 3029
Fly 3030 QSLYINVRNEWGEMFFLRLEIISKDATFILLFTDARTLPPPIRIDNCSEVVINFSQLRSKPVWIT 3094
Fly 3095 PVRPQSSLSYVMDDPLGQQILLMEAPGGNMIEFPINNKNNIKKTLTYTNFIYIAFQGTFERSNEE 3159
Fly 3160 ENTHRQLVLGVRGKKVVIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDANAVRLVLDLEKAP 3224
Fly 3225 NPME-FTNLVVRTPNKQRVTTQT------------WRFENGRLMCHANMCVQSRFGESGLKPNYE 3276
Fly 3277 AVVGR-TENRASSSKQIPIGQHIVAQKLRPGSGQLELSTKMDGPISTIEICDIKIKQNSVFLTPD 3340
Fly 3341 LLWMHA-SLN-NRQITDKGKVSFVHEYLINVELVKGIGISIIARKPCEEIMFISLDHINCDIVQS 3403
Fly 3404 ALENSLDLNIAYIQIDNQLLDAVSPIALHTQTSNDLEETQNAVVLKLKMLPSPNKNAIIFK---- 3464
Fly 3465 YLTLDL---KPSTASLEEKLILKVASFLGYGKINRQNLSVQYQ-----------FENTDDKP--- 3512
Fly 3513 --FLQDMK------------------RYYFENLSIGATQVRLS----------AFTSSKLPVE-- 3545
Fly 3546 -LHETKKALGLTLIKFEDALIELDRYSDKLHFETMDVYRKELKKHYINQ-VKWHAAAILGSVDFL 3608
Fly 3609 GNPLGFANDLSEGVSGLI---FEGS--------------VKSLVKNVTHGISNSTAKLTETLSDS 3656
Fly 3657 LGKVVLDDHDNETRQRILELQSNTSGGHLAAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLS 3721
Fly 3722 GLGKGLVGTVTKPIIGVLDLASETASAVRETSRDSHRNAPERKRLPR 3768 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 32/110 (29%) |
VPS13 | 147..368 | CDD:318996 | 55/229 (24%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 35/183 (19%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 119/722 (16%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 61/315 (19%) | ||
VPS13 | <3346..3802 | CDD:330393 | 124/497 (25%) | ||
T08G11.1 | NP_740900.1 | MRS6 | 4..>2154 | CDD:227376 | 513/2994 (17%) |
Chorein_N | 4..113 | CDD:289396 | 31/108 (29%) | ||
VPS13 | 139..373 | CDD:293513 | 55/234 (24%) | ||
VPS13_mid_rpt | 560..780 | CDD:293515 | 57/306 (19%) | ||
VPS13_mid_rpt | <1203..1329 | CDD:293515 | 39/242 (16%) | ||
SHR-BD | 2224..2490 | CDD:284143 | 66/350 (19%) | ||
VPS13_C | 2803..2982 | CDD:293514 | 40/179 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |