DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13D and T08G11.1

DIOPT Version :9

Sequence 1:NP_729825.2 Gene:Vps13D / 39448 FlyBaseID:FBgn0052113 Length:3919 Species:Drosophila melanogaster
Sequence 2:NP_740900.1 Gene:T08G11.1 / 172705 WormBaseID:WBGene00011629 Length:3212 Species:Caenorhabditis elegans


Alignment Length:4142 Identity:747/4142 - (18%)
Similarity:1382/4142 - (33%) Gaps:1437/4142 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDALRSFNLPVEVTAGSIRKIK 65
            :...|:..:||.:||.:::||:|:||::.:..|:|:|:|:.:::.||..|:||:::..|.:..:.
 Worm     2 VFESLVADLLNRFLGDFVDNLDSSQLNIGIWGGDVKLDNLQVKETALDDFDLPIKLKYGYLSSLV 66

  Fly    66 LQIPVRQFRTSPWCISIEGLFCIICPKNLDNWDYEK--EKLQDLEYK-LAVLDTAEAGWRSEKGK 127
            |:||.:.....|...:::||..|:.|.....::.||  :.:|:::.| ||.|:.|....|..|..
 Worm    67 LKIPWKNLYNEPVIATVDGLNLIVVPNKGVVYNEEKVAKNIQEIKQKTLARLEEARKERRKPKDP 131

  Fly   128 QMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQSCD 192
            |.::           :...|.|.||.|:::.:|::|.||||...........||.:..|..::.|
 Worm   132 QADT-----------FTEKMITQIIKNLQISVSNIHVRFEDRYTNRHRPFAMGITLEKLNFKTTD 185

  Fly   193 CDWTNGSYKMNNNEMNYKLVELKELSVYWDLLHE---DIKCQSYSNQEILEKMHSTCE-LRSHNF 253
            .:|....:| :..::.||||.|:.|::||:...|   |:..:....:::.|.:|:... ...:|:
 Worm   186 ENWRETIHK-DVVKIIYKLVSLQNLAIYWNSSTEFISDLDDKEAIRKKLQETIHNGKNGPEGYNY 249

  Fly   254 IIKPICATARWKRDKCQQVIRTKDK-PRVSCELLVPEVVIDISKVQRLQMLDKLSEIRQVKEVRQ 317
            |::||...|:.|.::..:...:..| |::...:.:..:.|.|.|.|...:|..|....:.....|
 Worm   250 ILEPIQMEAKLKLNQKPETDGSNWKIPKIDLAVDMHALSIAIGKFQYQDVLLFLEAQERFNAAGQ 314

  Fly   318 YRLKRPTCT-VESNPIAWWKYA---TICHGFDFKKNEEKWLMLKENLRYMLLYKSIIL------N 372
            |...||... .:.:..||||:|   .:......::|...|..::::.:.:..|:...:      :
 Worm   315 YLKYRPNLNEFKGHYKAWWKFAYTSILEEKVRRRRNNWSWDRMQKHRQLVRKYQKAWVRRQTEAS 379

  Fly   373 PNENLSAADKEFKAYIESDRKISDLTIMRRICFEKVFTKGFAFESQNEQGKNMLFHWFPNWMGWY 437
            |..::.|..||    .|....:.::.:.|:....::..:|...:.....|   ...|..:|.|  
 Worm   380 PGADVQATIKE----AEKKLDVFNVNVARQQAELEIDREGLTRQEDKPTG---WVAWGKSWFG-- 435

  Fly   438 ANSPSTPNNEQ---------DESLKHLEDDILVALENSLQN--SSDLKSDAVFGHFSIKLLKGLV 491
            .....||:.::         .|::...|...|....:..:|  .::...:.|...|..||.:..:
 Worm   436 GGGGPTPDKKKGAKDIGSQFQEAMTPEEKAKLFEAIDYQENIPPTNYPKEFVENKFDFKLGQVAI 500

  Fly   492 ILQTEDKLNDGRNKSMEMQFNNFSAYLQLSPQLTSYTVGISLQEVYLIDKTSSDTMH-------- 548
            ::       ||   ::.||.....|.::..|..::..|..|:||:.: |...::.:.        
 Worm   501 VV-------DG---AVSMQLLKLVASVEQRPSASAMHVESSIQELRM-DGCGTEIIRVRDPSIPW 554

  Fly   549 -NYLI--KPQTGNTATPNQLVKNAALQEDILFQLQYENCNHLRFQLNIKSKGLDLIYNEDAIQWL 610
             ::|:  .|..||.   :||||.|..                  .:|||       |...||...
 Worm   555 MSFLLDTNPLKGNY---DQLVKLAVA------------------PINIK-------YQAPAINNA 591

  Fly   611 LDFLADSNSFKYSPRNRVAKKTDFMKNWNEMFSGNEV-------NRKIWMFEIEIFAPRIIFLEN 668
            :|......|.:.:....:|     |..:.|:.:.:..       :|...:.:::|...||...|.
 Worm   592 IDVFKPPESVRLNQLTALA-----MSRYEEVKARSATGLAYAVEHRSRLVLDVQIQPARIYVSEG 651

  Fly   669 YKVSNSLMVLL-DFGKLEMRKMEVKRVIPVIESAVTENTSDDDETYLTPCSTPPASEKSGSESPT 732
            ...|:....|| |.|.|               |.||.:.|..|                      
 Worm   652 GTYSSEKPTLLADMGLL---------------SVVTVDNSSVD---------------------- 679

  Fly   733 LLENPKTESFLNKNVQLEYVLHNKIYDKYLINFTNLQVLVCKYEERWQACL-KTSSNFHLIDKFN 796
                   .|.:||..    .|..|.||::.:..:|:.:...:..|..:.|: :..|..|::....
 Worm   680 -------TSGMNKMA----ALMEKAYDRFHVKLSNVVIAFAENVETAENCVFEKESPLHVLKPTG 733

  Fly   797 INLTLEQRNIFTVDPEYPSFMLFGTCPTILIH-GNEELINNCCNIMK-----PI------IKASK 849
            :::.:.:.:|  .|.:.....:.|..|.|:|. .::.||    .:||     |.      .||.|
 Worm   734 LDIQIHKSSI--DDLKLAKMRVIGDLPNIVIGISDDRLI----GLMKLGLSIPTPKADEKTKAEK 792

  Fly   850 EME--------------------------NIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLV 888
            |:|                          ....||:.  ..:..|....:.:.::.::..::|:.
 Worm   793 ELEVPVAKIKDRAKMRTIMEVEEMEEDVTQKEEGGDD--DEKEKKKKTSEQQVQIELDLRLNQIG 855

  Fly   889 IEMQSTERSIAELQIIGARAGL---------TKEPHETNISMSVHGLLLVDAIQSFGPDFELLVA 944
            :.:...:....::.|:.....|         |.|.....|||               |:|:.|..
 Worm   856 VVVYRKDAVFCDVSILKMACKLQMRTFDMVVTAELGSIKISM---------------PEFKSLDE 905

  Fly   945 SHRH---VGMDSLSGSLKHSAIVSPTSPGSPNFFDRATSPHMITKAVQNIKMGDRSTEFCDDEDS 1006
            ...|   :..|.|.|:|.....|. .:|.||.|                      :||:...|. 
 Worm   906 KREHLYLIDNDELQGALMTLKFVQ-ANPESPFF----------------------ATEYALTEQ- 946

  Fly  1007 TALISVDIKIVPPNESNSMQLHTTSITFNSLDIIANQDTIIEILNFAKRTLLAQNIFPSESPESP 1071
                |||.:                  |..|.:..:|:.::|:..|.:......|.....:||..
 Worm   947 ----SVDFR------------------FTKLAVSLHQEGVLELKAFGEALQAQLNELQKNTPEEK 989

  Fly  1072 KEATEAPVDVVDQVDHKSHNEIFFDFFRLNILLLYTIKRDKFNVGRKVGTVTL-------TEAKI 1129
            |         |::...|...::......:..:......::|....:.||:.|.       .:.:|
 Worm   990 K---------VEETARKISRKLSDSVMSIASMSRTPSGKEKRQRKKTVGSATQEMDVSRNIKQRI 1045

  Fly  1130 NASF-----------------------------QSDLSIIGSLGGIQVIDITSEAFCHPRILSV- 1164
            .|||                             :..:.::.:|..|.:.|.|..| .:.::||| 
 Worm  1046 KASFGSLALMIGTQKHLETSLAIENINANVKITEKAMEVVATLRAISMKDRTPGA-VYKKLLSVT 1109

  Fly  1165 GRDQILRASDTNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQSHWSDKTTCTFQMRMASASYT 1229
            |::.:||.                   ::.:..::||..|:.    .|.......:||:|...:.
 Worm  1110 GKEDMLRF-------------------DFVQYQRTDEQRALM----KSSDVDMVVKMRLAQMRFV 1151

  Fly  1230 HCPRFLRDVNACITYFKRSLREFATSIGNKATDMAKEFVQQVRAVEQIGPVYPQRNRQDNWLDII 1294
            ....:|..:.|.:..|:......|.:....|.:.|....|.|:.:.:..|...|       ||:|
 Worm  1152 FLNLWLARLMAWLAPFQNEAVLAAQAAQAAAAEKAATAAQNVKQIMEQSPPRIQ-------LDVI 1209

  Fly  1295 ISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSDEFNESYTIEIKNTYVYSLNIDEGEYSFNV 1359
            :.:|.|::|..:||.:|::.:||:::..|.::.||:                             
 Worm  1210 LEAPFIVVPRLSTSRDVIVLHLGRLALKNEIRGDSE----------------------------- 1245

  Fly  1360 HPAKNKDAIPILHDTAITLQLYAGYSDDNDEDKQLNRFSIKGSMVEALKVSLNRKQYELLLESIR 1424
            :|....|.:.||                               |.:.                  
 Worm  1246 YPKAIIDRMDIL-------------------------------MTDC------------------ 1261

  Fly  1425 YATNFSNEVLNESDELDQNGDIEPTANIDAESIISTTIQFSVPVFQINLQNEYHNDLINLTFKNF 1489
               :|...|:||                |..::.|:.:......|::.||.       ||||.  
 Worm  1262 ---SFGMGVMNE----------------DVSAVSSSCLILKPISFKLALQR-------NLTFA-- 1298

  Fly  1490 NVKHISKGFDK-DVEVVLKSVLME----DLKSDLTSPFRNMVTSVDLEQKIKKNEMTSSSCPDLP 1549
                ::|...: .|:..:.|:..|    |.|:.:.:...|:....||          :...|..|
 Worm  1299 ----VAKELPEIVVDAHIHSIEAEMSDADYKTLMQTLSGNLAEGADL----------AIPPPPPP 1349

  Fly  1550 SYCNSLKNRSSSVPSCFYNHMQVKVFGGDQKYTSSNKNELGKKKESQT--LVIYKSHTGRSAQNG 1612
            |   ||::.:::.                 ..||..|.:..|.:|:..  .||.||||       
 Worm  1350 S---SLESSNTAA-----------------ALTSPGKEKEKKDREANAGPPVIEKSHT------- 1387

  Fly  1613 KLEQTSSIQFNCLNLAICVERWYTIFDFFGLVSVDNVNEKYPEEMKLVEKHIDKVCSKLKVSIRS 1677
                                  ..:|.|.                      :||:.:.|      
 Worm  1388 ----------------------RIVFQFV----------------------LDKISAVL------ 1402

  Fly  1678 FNFTLIRNESLLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLTKYGNIYKQKFLTSGTEALN 1742
                                            .||                          ||:|
 Worm  1403 --------------------------------YEG--------------------------EAVN 1409

  Fly  1743 FVYKKKLVDLEALNTLDTDSTLRINMSAVHYIHTKRFSTELHVFVKDLLQLQTPVIRKLKKHGSE 1807
            ...|:.          |..:.||:.                                        
 Worm  1410 GERKES----------DAFAALRLK---------------------------------------- 1424

  Fly  1808 QNMRPSKMKLVIQADSPVIVLPSSYNRNEVIIAYLGQFSLKNSFHFASDNNIISKMSATPSKDEI 1872
                                                  ::|.|.....||:|:..||        
 Worm  1425 --------------------------------------NVKTSGKIGEDNSIVFAMS-------- 1443

  Fly  1873 LDVMRIDLVNINLFSGERSSMKAKADQEKDRIIIADMNFLRLGQPFFNESCFLHLQLERNLSADA 1937
            ||...:|        .||.. |.|..:..|:....|..||.:.   ||:....:.|:...:||..
 Worm  1444 LDAFTMD--------DERKE-KTKISKLMDKKGSKDDRFLDMS---FNQDAEANKQIRLKMSAFF 1496

  Fly  1938 HRVCPDISVQGTFSKLSGIINIQQYKLIRSFLNNNIGEQTDDIYMNYHNNSCTSIERLSTINLMP 2002
            ..:||:.     ...|:...|:.|.:           ||               :|:.:....:|
 Worm  1497 ICLCPEF-----LGCLTRFFNVPQSE-----------EQ---------------LEKQAVTANVP 1530

  Fly  2003 KNEVSKIVSILISIRILLEDVSLLLALNTSQSAAIEPLACIHFLKSTLEIDLFSDGSQDIDLISS 2067
            ...||...|.          .|.......:.|...:|:       .||.|        |.|:...
 Worm  1531 TKAVSASPSA----------SSTFTGGTKTSSGPPQPV-------GTLAI--------DCDMHGV 1570

  Fly  2068 NILIVDERNESDKSNENVFKNILEPSKKEVRIEN-SVQVEVHCRKKATFSKYTIMLNNMRVFALL 2131
            .:::|::.              :.|...:..|.: :|....|..::...:|..:.:.|:.:|:  
 Worm  1571 EVILVEDS--------------MHPESTQALILSFNVTAASHPNEQTKDTKMNVAVENLTIFS-- 1619

  Fly  2132 SFLDQLKSYLQEDSPAPVVNNAANQIAQKPQIDTSISTEYVVNITDSEIIFAEECSRLDSNAIIL 2196
                   ||.|        ::..|::..  |:.|.:..|.:||:....                 
 Worm  1620 -------SYYQ--------SSRRNEVTY--QVLTPVRIEALVNMNTER----------------- 1650

  Fly  2197 KSTTVICYKPNSNIVPLSLDINHLEIFSCTLDAEEESALSIIDPFTLIIELRSNCLNILIQKHLN 2261
            |:|..:                                                           
 Worm  1651 KTTDAV----------------------------------------------------------- 1656

  Fly  2262 IRLSYVDVKLFSRMARLLPTQTSRPKNVISKADSDLEKAAPLVAMGFEISDCLYAMQINNW---- 2322
            :::|.:|:|:...:.|||           |...::..|::   |.|...|....|.::..|    
 Worm  1657 LKMSALDIKMSPSIIRLL-----------SAVSAEFSKSS---APGETGSISQKAAKLRKWPNYF 1707

  Fly  2323 ---RINDAAIW-----LSQ----------QKQNTYRNPALEMKTAVVDASLISVFIIDDCMDADV 2369
               .|:....|     ::|          |:..:..:..:..::|.||...||..:........|
 Worm  1708 DSKPIDHRKYWFFAAPVAQEAVEEELDVTQEDKSRTDSMIGKESAKVDIERISFTLEAGTGAIPV 1772

  Fly  2370 PLLEVSLSKFLLNFTFQTQDPNPKETNIRHY---SLGNIDTEVSV--NYYNRRLSGWEPVAETWE 2429
            ||:.:.:.                 .|...|   |...:.:.|||  :|||..:|.|||:.|..|
 Worm  1773 PLIFLDML-----------------VNAEAYDWSSAMRVSSGVSVQMSYYNESVSVWEPIIEPVE 1820

  Fly  2430 SNL----NWKYT--------KGHLDNKKRFEIGISSKQMLKLNVTSTFIELFHMVLKNWTNDFND 2482
            :..    .||..        :...|:..:.|:.|.:.:||.:.||.:.:.|.        |..::
 Worm  1821 NEKGEFERWKLAMTMKSRNKQDSSDSSPQTEVKIEADKMLNVTVTKSLLSLL--------NKLSE 1877

  Fly  2483 NGAKNFRQRSP--------FIPFALQNLSGTPLLFKPIYAPLGDLTRSDLQQVELIKNWYSVQPN 2539
            ..|...:|.:|        ..||.:.|.:|  :..|.:          |.:.:.:.:|..:|...
 Worm  1878 VFATAAKQITPTKTRHLPGISPFVVLNETG--ISVKVL----------DTETIRVSENGQAVDAT 1930

  Fly  2540 ETKTFDFSQKSKLRHVHSHQLNLHQIFVQIHG---WTLIGPISVDKVGMFFRTTKLDSQFLTKSR 2601
            ..:..|...|::...|...:|::.|  .:|.|   :.|.|.:...|:|      :.:.:.:...|
 Worm  1931 HGEFVDVFLKNRKSDVEDRRLSIEQ--EEITGDLKFELAGTVRETKIG------RAEKRVIHLPR 1987

  Fly  2602 I--------VFDISLIGSAQKLIKVKSSLGVINKLDRNVFL------KMTLKGT--HSDGLSSIS 2650
            :        :...:.:.::::|:.:.|.:...|.|...|.:      .:.|.||  |.:.:    
 Worm  1988 VSDGGHKWLIVAETTVENSRRLVTLNSHVKFTNHLSYAVEIYSKRDTTLDLFGTVEHGETI---- 2048

  Fly  2651 VIKPNDELSVPLKFI-DASLYVAHNTSESDAYEDTGFSNEEILWK----------ACGKDDTRQL 2704
                  .|:|||.|. ...:|:   ....|.||   .|.|.:.|.          .|..|.|   
 Worm  2049 ------PLAVPLLFSPSGDIYL---KPVDDKYE---VSFESLCWHNFEHNRRQAVRCEADST--- 2098

  Fly  2705 LAGYDTNKSILYTFVNISRE------------IYHCKEQNLPGHKITLLPPLKINNMLCCDLMFK 2757
                |.:.|.:|....:..|            |||          :.|.|||:.:|.|..|:..:
 Worm  2099 ----DGSFSGIYIDSVVHEEKIQDGIDDQTTSIYH----------VHLHPPLEFHNNLPFDINIE 2149

  Fly  2758 IHEHATGRINSSESVNIYNVNICQPLNLSITLDNFQLSGQLKIPVSHRGVIEPKLKLIDIQKREL 2822
            :.|.   ::..:....:.||....|:...:|.            :..:.|::..:..|   |:::
 Worm  2150 LPEQ---KVLGAGMSTLLNVVAGSPVKAWLTY------------LGEKYVLDMSIPEI---KKDV 2196

  Fly  2823 HVRVSIQSVPGK--------------GMELYISAPVWIINKTGLPLIYKQEG---TSHTAAG--- 2867
            .| |::.:..|.              ..::|:.||.|::|.|...|.:.:..   .|:||.|   
 Worm  2197 EV-VALNTETGSDELLLGLHWTSEYGDQKVYLYAPFWLVNNTDKMLRHVESSGNMLSNTARGCVP 2260

  Fly  2868 -------QFEEHETARQ----VAPLMFSFSDQEGSPALVLRLGK----AYGSNNMWCKSFSTHKD 2917
                   ..:|::.|.|    ..|::..|      ||:.|...|    ...:.:.|.:.|..  |
 Worm  2261 CGKKSVVTSQENDDAVQHLPTENPIILPF------PAIDLSKKKKARVRIENLSEWSEEFPL--D 2317

  Fly  2918 LADRDLRAENTKGS---YAIGISVRRGR-GLYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNY 2978
            ......|. ..|||   :.:.:.::..: ||   |..||.:|.:.:.|.....:|.         
 Worm  2318 TVGNAARI-TCKGSEHDFDLTVDIKLCQSGL---TKIVTFAPFYLVSNLGKNPMEI--------- 2369

  Fly  2979 DRPDPRK-IISAPVDCNFAFHWP-NWDQEQIICVRI---PEIECCCWSKGIPI---------KDV 3029
             |.:.:| .:..|.:..... || ...:.:::|||.   ||.|    |...||         .|.
 Worm  2370 -REEGQKGWVDIPAETCVGI-WPVERKKRKLMCVRYKEEPEAE----SLLFPITENYETLCHMDG 2428

  Fly  3030 QSLYINVRNEWGEMFFLRLEIISKDATFILLFTDARTLPPPIRIDNCSEVVINFSQLRSKPVWIT 3094
            :::.:.|....||         |..|..:..|.....   |:::.|...|.:.|.|         
 Worm  2429 EAIGVEVSVSTGE---------SSVAIHLSSFVPGMC---PVQVMNNLTVPVTFGQ--------- 2472

  Fly  3095 PVRPQSSLSYVMDDPLGQQILLMEAPGGNMIEFPINNKNNIKKTLTYTNFIYIAFQGTFERSNEE 3159
                                                 |.:||.|:....|.:.::....|..   
 Worm  2473 -------------------------------------KGHIKTTVGPNEFAHFSWSSIIEPK--- 2497

  Fly  3160 ENTHRQLVLGVRGKKVVIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDANAVRLVLDLEKAP 3224
                             ::|.:.||    |...........|.               |.::|:.
 Worm  2498 -----------------VLEVDIGD----WHFEDKLDQNRFGD---------------LQIDKSV 2526

  Fly  3225 NPME-FTNLVVRTPNKQRVTTQT------------WRFENGRLMCHANMCVQSRFGESGLKPNYE 3276
            .... ::|.::   .:|||...|            |  |...:...|.:.:|. ||.|.:    :
 Worm  2527 RRFSYYSNFLI---GRQRVLLFTPDVDIAKAAYGSW--ETDVVDMQAEISLQG-FGLSVV----D 2581

  Fly  3277 AVVGR-TENRASSSKQIPIGQHIVAQKLRPGSGQLELSTKMDGPISTIEICDIKIKQNSVFLTPD 3340
            .:||| ....|.||..|...:.:...:.:|      |:.|.      :::.:.|.:.:.|....|
 Worm  2582 NIVGREIIYMAISSSDILWEEEVKKGRFKP------LAVKY------MQVLEEKYQAHLVTPNDD 2634

  Fly  3341 LLWMHA-SLN-NRQITDKGKVSFVHEYLINVELVKGIGISIIARKPCEEIMFISLDHINCDIVQS 3403
            ...|.| .:| ||.|..|.|                 |..:..|:..|:.::....       :|
 Worm  2635 YEAMEAFEVNVNRMIMKKKK-----------------GKEVKLRRIFEKGLWACYG-------KS 2675

  Fly  3404 ALENSLDLNIAYIQIDNQLLDAVSPIALHTQTSNDLEETQNAVVLKLKMLPSPNKNAIIFK---- 3464
            :....|...|.:|||||||...:.|..                   |.::|.| |:.|:..    
 Worm  2676 SQRTRLHAKINHIQIDNQLDACIFPRV-------------------LSVVPPP-KSVIVDNTPKP 2720

  Fly  3465 YLTLDL---KPSTASLEEKLILKVASFLGYGKINRQNLSVQYQ-----------FENTDDKP--- 3512
            ::.|.|   :|..:|:.|         :.||.:..|..|||..           ......||   
 Worm  2721 FIELSLLQRQPEFSSIAE---------IEYGHVLIQEFSVQVDQGLINALLLLISGEVTRKPYGK 2776

  Fly  3513 --FLQDMK------------------RYYFENLSIGATQVRLS----------AFTSSKLPVE-- 3545
              |.:|:|                  :.::.:|.|....:.||          |.:...:|::  
 Worm  2777 EMFDEDIKICHVTLSETASTYRSQRPKSFYNDLHISPIMMHLSFSQGGTSGDVAASGVSMPIQSE 2841

  Fly  3546 -LHETKKALGLTLIKFEDALIELDRYSDKLHFETMDVYRKELKKHYINQ-VKWHAAAILGSVDFL 3608
             ::...:::|:||.:.:|.:.:|..:..|..|.:.:....|:..||..| :|.....:|| :|.:
 Worm  2842 MINVLLRSVGVTLTELQDVVFKLAYFERKCVFYSPEQLNSEIISHYAKQFIKQVYVLVLG-LDII 2905

  Fly  3609 GNPLGFANDLSEGVSGLI---FEGS--------------VKSLVKNVTHGISNSTAKLTETLSDS 3656
            |||.|...|||.||..|.   |:|:              |:|:..:...|.:.:..::|.|:...
 Worm  2906 GNPFGLVRDLSAGVEDLFYQPFQGAIQGPEEFAAGVALGVQSMFGHAVGGAAGAVGRITGTVGKG 2970

  Fly  3657 LGKVVLDDHDNETRQRILELQSNTSGGHLAAGLKGLGFGLLGGVTSIVRHTYDGATSDGVPGFLS 3721
            :..:..||...:.||..|..:..:.|..:|.||||||.|::||:|.:|....:||..:|..||:.
 Worm  2971 VAALTFDDDYMKKRQEDLNRKPQSFGEGMARGLKGLGMGVVGGITGVVTKPIEGAKQEGGFGFVK 3035

  Fly  3722 GLGKGLVGTVTKPIIGVLDLASETASAVRETSRDSHRNAPERKRLPR 3768
            |:||||:|.||:|:.||:|.||.|.::||..:..:....|.|.  ||
 Worm  3036 GVGKGLIGVVTRPVSGVVDFASGTMNSVRAVAGTNREAGPLRP--PR 3080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13DNP_729825.2 Chorein_N 4..112 CDD:315323 32/110 (29%)
VPS13 147..368 CDD:318996 55/229 (24%)
VPS13_mid_rpt <656..837 CDD:318998 35/183 (19%)
VPS13 <2039..>2694 CDD:330393 119/722 (16%)
SHR-BD 2836..3113 CDD:310922 61/315 (19%)
VPS13 <3346..3802 CDD:330393 124/497 (25%)
T08G11.1NP_740900.1 MRS6 4..>2154 CDD:227376 513/2994 (17%)
Chorein_N 4..113 CDD:289396 31/108 (29%)
VPS13 139..373 CDD:293513 55/234 (24%)
VPS13_mid_rpt 560..780 CDD:293515 57/306 (19%)
VPS13_mid_rpt <1203..1329 CDD:293515 39/242 (16%)
SHR-BD 2224..2490 CDD:284143 66/350 (19%)
VPS13_C 2803..2982 CDD:293514 40/179 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4159at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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