Sequence 1: | NP_729825.2 | Gene: | Vps13D / 39448 | FlyBaseID: | FBgn0052113 | Length: | 3919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_060360.3 | Gene: | VPS13B / 157680 | HGNCID: | 2183 | Length: | 4022 | Species: | Homo sapiens |
Alignment Length: | 4716 | Identity: | 821/4716 - (17%) |
---|---|---|---|
Similarity: | 1507/4716 - (31%) | Gaps: | 1672/4716 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRDLITWVLNTYLGKYLENLNSAQLSVALLSGEVELENIPIRKDAL-RSFNLPVEVTAGSIRKI 64
Fly 65 KLQIPVRQFRTSPWCISIEGLFCII------------CPKNLDNWDYEKEKLQDLEYKLAVLDTA 117
Fly 118 EAGWRSEKGKQMESYYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRF--EDIVDTGKSKICTG 180
Fly 181 IKIGSLTAQSCDCDWTNGSYKMNNNEMNYKLVELKELSVYWDLLHEDIKCQSYSNQEILEKMHST 245
Fly 246 CELRSHN------FIIKPIC--ATARWKRDKCQQVIRTKDKPRVSCELLVPEVVIDISKVQRLQM 302
Fly 303 LDKLSEI------RQVKEVRQYRLKRPTC----------------------------------TV 327
Fly 328 ESNPIAW----WKYATICHGF-----DFKKN-------EEKWLMLKENLRYMLLY---------- 366
Fly 367 -----KSIILNPN-----------------ENLSAADKEFKAYI-------------------ES 390
Fly 391 DRKISDLTIMRRICFEKVFTKGFAF----------------------------ESQNEQGKNMLF 427
Fly 428 HWFPNWMGWYANSPST----PNNEQDESLKHLED------------------------------- 457
Fly 458 DILVALENSLQNSSDLKSD--------------AVF------GHFSIKLLK-GLVILQTEDKLND 501
Fly 502 --------GRNKSMEMQFNNFSAYLQLSPQLTSYTVGISL---------QEVYLIDKTS--SDTM 547
Fly 548 HNY--------LIKPQTG--------------------NTATPNQLVK----------------- 567
Fly 568 ----NAALQ----EDILFQLQYENCNHLR----------------FQLNIKSK-----------G 597
Fly 598 LDLIYNEDAI-----------------------QWLLDFL------ADSNSFKYSPRNR------ 627
Fly 628 ----------VAKKTDFMKNWNEM----FSGNEVNRKIWMFEIEIFAPRIIFLENYKVSNSLMVL 678
Fly 679 LDFGKLEMRKMEVKRVIPV-IESAVTENTSDDDETYLTPCSTPPASEKSGSESPTLLENPKTESF 742
Fly 743 LNKNVQLEYVLHNK---IYDKYLINFTNLQVLVCKY-EER--------WQACLKTSSNFHLIDKF 795
Fly 796 NINLTLEQRNIFTVDPE----YPSFMLFGTCPTIL---IHGNEELINN---CCNIMKPIIKASKE 850
Fly 851 MENIYRGGNTIYASERIKNLAEDDRSRVVIEFVMDQLVIE------MQSTERSIAELQIIGARAG 909
Fly 910 L-TKEPHETNISMSVHGLLLVDAIQSFGPDFELLVASHRHVGMDSLSGSLKHSAIVSPTSPGSPN 973
Fly 974 FFDRATSPHMITKAVQ---NIKMGDRSTEFCDDEDSTALISVDIKIVPPNESN---SMQLHTT-- 1030
Fly 1031 --SITFNS----LDIIANQDTIIEILNFAKR-TLLAQNIFPS-----ESPESPKEATEAPVDVVD 1083
Fly 1084 QVDHKSHNEIFFDFFRLNILLLYT---IKRDKFNVGRKVGTVTLTEAKINASFQSDLSIIGSLGG 1145
Fly 1146 IQVIDITSEAFCHPRILSVGRDQILRASD-TNKQTVLSQLSNEIYSNNYNEETKSDESDAISFQS 1209
Fly 1210 HWSDKTTC-----TFQMRMASASYTHCPRFLRDVNACITYFKRSLREFATSIGNKATDMAKEFVQ 1269
Fly 1270 QVRAVEQIGPVYPQRNRQDNWLDIIISSPIIILPISNTSTNVLIANLGKISCSNAVKCDSDEFNE 1334
Fly 1335 SYTIEIKNTYVYSLN----------IDEGEYSFNVHPAKNKDAIPILHDTAITLQLYAGYSDDND 1389
Fly 1390 EDKQLNRFSIKGSMVE-ALKVSLNR--------KQYELLLESIRYAT-----------NFSNEVL 1434
Fly 1435 NESDELDQNGDIEPTANIDAESIISTTIQFSVPVFQINL-----QNEYHNDLINLTFKNFNVKHI 1494
Fly 1495 SKGFDKDVEVVLKSVLMEDLKSDLT-----SPFRNMVTSVD----------LEQKIKKNEMTSSS 1544
Fly 1545 CPDLPSYCNSLKNRSSSVPSCFYNHMQVKVFGG-----DQKYTSSNKNELGKKKESQTLVIYKSH 1604
Fly 1605 TGRSAQN-GKLEQTSSIQFNCLNLAICVERWYTIFDFFGLVSVDNV----------NEKYPEEMK 1658
Fly 1659 LVEKHIDKVCSKLKVSIRSFNFTLIRNESLLSRVNVSNAVFMILQDPYSKIVEGCLGSVSVNDLT 1723
Fly 1724 KYGNIYKQKFLTSGTEALNFVYKKKL--VDLEALNTLDTDSTLRINMSAVHYIHTKRFSTELHVF 1786
Fly 1787 VKDLLQLQTPVIRKLKKHGS-EQNMRPSKMKLVIQADSPVIVLPSSYNRNEVIIAYLGQFSLKNS 1850
Fly 1851 FHFASDNNIISKMSATPSKDEILDVMRIDLVNINLFSGERSSMKAKADQEKDRIIIADMNFLRLG 1915
Fly 1916 -QPFFNESCFLHLQLERNLSADAHRVCPDISVQGTFSKLSGI-INIQQYKLIRSF--------LN 1970
Fly 1971 NNIGEQTDDIYMNYHNNSCT-------SIERLSTINLMPKNEVSKIVSIL--ISIRILLEDVSLL 2026
Fly 2027 LALNTSQSAAIEPLACIH---FLKSTLEIDLFSDGSQDIDLISSNILIVDERNESDKSNENVFKN 2088
Fly 2089 ILEPSKKEVRIENSVQVEVHCR------KKATFSKYTIMLNN--MRVF-------ALLSFLDQLK 2138
Fly 2139 SYLQED--------SPAPVVNNAA--NQIAQKPQIDTSISTEYVVNITDS---------EIIF-- 2182
Fly 2183 -AEECSRL------DSNAIILKSTTVICYKPNSNIVPLSLDINHLEIFSCTLDAEEESALSIIDP 2240
Fly 2241 FTLIIELRSNCLNILIQKHLNIRLSYVDVKLFSRMARLLPTQTSRPKNVISKADSDLEKAAPLVA 2305
Fly 2306 MGFEISDCLYAMQINNWRINDAAIWLSQQKQNTYRNPALEMKTA------------VVDASLISV 2358
Fly 2359 FIIDDCMDA-DVPLLEVSLSKFLLNFTFQTQDPNPKETNIRHYSLGNIDTEVSVNYYNRRLSGWE 2422
Fly 2423 PVAETWESNLNWKYTKGHLDNKKRFEIGISSKQMLKLNVTS------------TFIELFHMVLKN 2475
Fly 2476 WTN-------------DFNDNGAKNFRQRSPFIPFAL-----------QNLSGTPLLFKPIYAPL 2516
Fly 2517 GDLTRSDLQQV-------------ELIKNWYSVQPNETKTFDFSQKSK-----LRHVHSHQLN-- 2561
Fly 2562 -------LHQIFVQIHGWTLIG------PISVDKVGMFFRTTKLDSQFLTKSRIVFDISLIGSAQ 2613
Fly 2614 KLIKVKSSLGVINKLDRNVFLKMTLKGTHSDGLSSISVIKPN-DELSVPLKFIDASLYVAHNTSE 2677
Fly 2678 SDAYEDTGFSNE--EILWKACGKDDTRQLLAGYDTNKSILYTFVNISREIYHCKEQNLPGHKITL 2740
Fly 2741 LPPLKINNML---CCDLMFKIHEHATGRINSSESVNIYNVNICQPLNLSITLDNFQLSGQLKIPV 2802
Fly 2803 SHRGVIEPKLKLIDIQKRELHVRVSIQSVPGKGMELYISAPVWIINKTGLPLIYKQEGTSHTAAG 2867
Fly 2868 QFEEHETARQVAPLMFSFSDQEGS---PALVLR--LGKAYGSNNMWCKSFSTHKDLADRDLRAEN 2927
Fly 2928 TKGSYAIGISVRRGRGLYACTTFVTLSPRFHLHNRSGYKLEFMQLCDIVNYDRPDPRKIISAPVD 2992
Fly 2993 CNF--AF----HW--------------------PNW-----------DQEQIICVRI-----PEI 3015
Fly 3016 ECCCW-------SKGIPIKDVQSLYINVRNEWGEMFFL-RLEI-----------ISKDATFILLF 3061
Fly 3062 TDARTLPPPIRIDNC---SEVVINFSQLRSKPVWITPVRPQSSLSYVMDDPLGQQILL--MEAPG 3121
Fly 3122 GNMI-----------EFPINNKNNIKKTLTYTNFIYIAFQGTFERSNEEENTHRQLVLGVRGKKV 3175
Fly 3176 VIVEKNSGDRSQLWLMNSNGQLEHEGSTPPIQTNDANAVRLVLDLEKAPNPMEFTNLVVRTPNKQ 3240
Fly 3241 RVTTQTWRFENGRLMCHANMCVQSRFGESGLK--PNYEAVVGRTENRASSSKQIPIGQHIVAQKL 3303
Fly 3304 RPGSGQLELSTKMDGPISTIEICDIKIKQNSVFLTPDLL------WMHASLNNRQITDKGKVSFV 3362
Fly 3363 HEY-LINVELVKGIGISIIA---------------RKPCEEI----MFIS---------LDH--I 3396
Fly 3397 NCDIVQSALEN-------------------------SLDLNIAYIQIDNQLLDAVSPIALHTQTS 3436
Fly 3437 N--------DLEETQNAVVLKLKMLPSPNKNAIIFKYLTLDLKPSTASLEEKLILKVASFLGYGK 3493
Fly 3494 -----INRQNLSVQYQFENTDDKPFLQDMKRYYFE--------NLSIGATQVRLSAFTSSKLPVE 3545
Fly 3546 LHETKKALGLTLIKFEDALIE-----------LDRYSDKLH-------FETMDVYR------KEL 3586
Fly 3587 KKHYINQVKWHAAAILGSVDFLGNPLGFANDLSEGVSG---LIFEGSVK--------------SL 3634
Fly 3635 VKNVTHGISNSTAKLTETLSDSLGKVVLD-DHDN---ETRQRILELQSNTSGGHLAAGLKGLGFG 3695
Fly 3696 LLGGVTSIV-------RHTYDGATSDG--VPGFLSGLGKGLVGTVTKPIIGVLDLASETASAVRE 3751
Fly 3752 TSRDSHRNAPERKRLPRCVTG--APGGLLP-LYSNRQSKGQQYLYLINQKNFSEKIISYEPNLWS 3813
Fly 3814 DKEARLRLLVSTEYVRIFSLSD-----ANPTIMFEC 3844 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13D | NP_729825.2 | Chorein_N | 4..112 | CDD:315323 | 26/120 (22%) |
VPS13 | 147..368 | CDD:318996 | 41/301 (14%) | ||
VPS13_mid_rpt | <656..837 | CDD:318998 | 34/203 (17%) | ||
VPS13 | <2039..>2694 | CDD:330393 | 131/785 (17%) | ||
SHR-BD | 2836..3113 | CDD:310922 | 62/345 (18%) | ||
VPS13 | <3346..3802 | CDD:330393 | 127/589 (22%) | ||
VPS13B | NP_060360.3 | Chorein_N | 3..94 | CDD:289396 | 23/90 (26%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 100..134 | 9/50 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1247..1314 | 14/66 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1860..1880 | 6/40 (15%) | |||
SHR-BD | <2632..>2712 | CDD:284143 | 22/88 (25%) | ||
VPS13_C | 3585..3731 | CDD:293514 | 30/145 (21%) | ||
ATG_C | 3733..3839 | CDD:286423 | 35/111 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |