DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klc and KLC4

DIOPT Version :9

Sequence 1:NP_001261780.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_958931.1 Gene:KLC4 / 89953 HGNCID:21624 Length:637 Species:Homo sapiens


Alignment Length:506 Identity:339/506 - (66%)
Similarity:405/506 - (80%) Gaps:20/506 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QMSQDEIITNTKTVLQGLEALRVEHVSIMNGIAE----VQKD-------NEKSDMLRKNIENIEL 56
            ::||:||:.:|:.|.|||||||.||.:::..:::    :|:.       :||:..||:::|||||
Human    34 RLSQEEILGSTRLVSQGLEALRSEHQAVLQSLSQTIECLQQGGHEEGLVHEKARQLRRSMENIEL 98

  Fly    57 GLSEAQVMMALTSHLQNIEAEKHKLKTQVRRLHQENAWLRDELANTQQKFQASEQLVAQLEEEKK 121
            ||||||||:||.|||..:|:||.||:.|||||.|||.|||||||.|||:.|.|||.|||||||||
Human    99 GLSEAQVMLALASHLSTVESEKQKLRAQVRRLCQENQWLRDELAGTQQRLQRSEQAVAQLEEEKK 163

  Fly   122 HLEFMASVKKYDE----NQEQDDACDKSRTDPVVELFPDEENEDRHNMSPTPPSQFANQTSGYEI 182
            ||||:..:::|||    ::|::....|...|   :|||:||.||..|.........|.|..||||
Human   164 HLEFLGQLRQYDEDGHTSEEKEGDATKDSLD---DLFPNEEEEDPSNGLSRGQGATAAQQGGYEI 225

  Fly   183 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNKYKEA 247
            |||||||||||||||:|||||||||||||||||||||||..||||||||||||||||||||||||
Human   226 PARLRTLHNLVIQYAAQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEA 290

  Fly   248 ANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHPDVA 312
            |:|||||||||..|||.:||||||||||||||||||||||:|||||:|||||||||||.:|||||
Human   291 AHLLNDALSIRESTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTNHPDVA 355

  Fly   313 KQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEAEILY 377
            ||||||||||||||||:.||:||||||.|||.:||||:||||:||||||.||||||:|.|||.||
Human   356 KQLNNLALLCQNQGKYEAVERYYQRALAIYEGQLGPDNPNVARTKNNLASCYLKQGKYAEAETLY 420

  Fly   378 KQVLTRAHEREFGAIDSKNKPIWQVAEEREE-HKFDNRE-NTPYGEYGGWHKAAKVDSPTVTTTL 440
            |::|||||.:|||::|..:||||..|||||| .|..:.| .|||.|||||:||.||.||||.|||
Human   421 KEILTRAHVQEFGSVDDDHKPIWMHAEEREEMSKSRHHEGGTPYAEYGGWYKACKVSSPTVNTTL 485

  Fly   441 KNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTKLSQLLTSNEKRRS 491
            :||||||||||..|||||||:||:||:::..|...|||:::||..::.||:
Human   486 RNLGALYRRQGKLEAAETLEECALRSRRQGTDPISQTKVAELLGESDGRRT 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_001261780.1 TPR_12 185..258 CDD:315987 68/72 (94%)
TPR repeat 187..214 CDD:276809 25/26 (96%)
TPR_12 226..302 CDD:315987 68/75 (91%)
TPR repeat 228..256 CDD:276809 26/27 (96%)
TPR_12 269..344 CDD:315987 66/74 (89%)
TPR repeat 270..298 CDD:276809 25/27 (93%)
TPR_12 310..384 CDD:315987 59/73 (81%)
TPR repeat 311..341 CDD:276809 26/29 (90%)
TPR_12 353..469 CDD:315987 82/117 (70%)
TPR repeat 354..381 CDD:276809 20/26 (77%)
KLC4NP_958931.1 SMC_N 51..>166 CDD:330553 67/114 (59%)
TPR_12 228..303 CDD:315987 70/74 (95%)
TPR repeat 230..257 CDD:276809 25/26 (96%)
TPR_12 269..345 CDD:315987 68/75 (91%)
TPR repeat 271..299 CDD:276809 26/27 (96%)
TPR_12 312..386 CDD:315987 65/73 (89%)
TPR repeat 313..341 CDD:276809 25/27 (93%)
TPR_12 353..427 CDD:315987 59/73 (81%)
TPR repeat 354..384 CDD:276809 26/29 (90%)
TPR_12 396..514 CDD:315987 82/117 (70%)
TPR repeat 397..424 CDD:276809 20/26 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 192 1.000 Domainoid score I3215
eggNOG 1 0.900 - - E2759_KOG1840
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 698 1.000 Inparanoid score I680
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D238239at33208
OrthoFinder 1 1.000 - - FOG0002344
OrthoInspector 1 1.000 - - otm41970
orthoMCL 1 0.900 - - OOG6_102564
Panther 1 1.100 - - O PTHR45783
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1545
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.830

Return to query results.
Submit another query.