DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klc and nphp3

DIOPT Version :9

Sequence 1:NP_001261780.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001072733.2 Gene:nphp3 / 780190 XenbaseID:XB-GENE-487873 Length:1300 Species:Xenopus tropicalis


Alignment Length:539 Identity:152/539 - (28%)
Similarity:236/539 - (43%) Gaps:87/539 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LQGLEALRVEHVSIMNGIAEVQKDNEKSDMLRKNIENIELGLSEAQVMMALTSHLQNI---EAEK 78
            ||..:|:.:|:   |.|...:     .|:...|.|::....||..:|.......|..:   :.||
 Frog   796 LQAWDAVNLEY---MQGDQSI-----ISEYREKLIQHFNAQLSCDRVTWRSADELTWLYQQQGEK 852

  Fly    79 HKLKTQVRRLH-QENAWLRDELANTQQKFQASEQLVAQLEEEKKHLEFMASVKKYDENQEQDDAC 142
            .||...:..|. .:|.:.|...|.....:    |||.: ::.....|:..::|:|:.:.|.::  
 Frog   853 QKLHRCLMNLFVSQNLYKRGHFAELLSYW----QLVGK-DKISMASEYFDALKQYERSCEGEE-- 910

  Fly   143 DKSRTDPVVELFPDEENEDR---------HNMSPTPPSQFANQTS-GYEIPARLRTLHNLVIQYA 197
               :...:.:|:   |...|         ..::|...|....:|: ..:.|:..::||.|...|.
 Frog   911 ---KMTSLADLY---ETLGRFLKDLGLLSQAVTPLQRSLEIRETALDPDHPSVAQSLHQLAGVYV 969

  Fly   198 SQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNDALSIRGK-- 260
            ...::..|..|.|||||..|...|.:|..||..|:.||::|:.|||:::|..|...:|.||.|  
 Frog   970 QSKKFGNAEQLYKQALEISENAYGSEHMRVARELDALAVLYQKQNKFEQAEQLRKKSLKIRQKSA 1034

  Fly   261 ----------------------TLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKV 303
                                  |||::....|.|||.|.|||..:...:.||...||:||:||:|
 Frog  1035 RRKGSMYGFALLRRRALQLEELTLGKDTSDNARTLNELGVLYYLQNNLETAETFLKRSLEMRERV 1099

  Fly   304 LGKDHPDVAKQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQG 368
            ||.||||.|:.:||||.|...:.:||:.|:.|:|||||....|.||.|::|.|..:||..|.::|
 Frog  1100 LGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTVKHLAVLYKRKG 1164

  Fly   369 RYTEAEILYKQVLTRAHEREFG--------AIDSKNKPIWQVAEEREEHKFDNRENTPYGE-YGG 424
            :..:|..|| ::.....::.||        |:.:......|:.::.|......|....|.: .|.
 Frog  1165 KLDKAVPLY-ELAVEIRQKSFGPKHPSVATALVNLAVLYCQMKKQAEASPLYERAMKIYEDSLGR 1228

  Fly   425 WHKAAKVDSPTVTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTKLSQLLTSNEKR 489
            .|       |.|..|||||..|...:|.||.|..|...||.        .|:|:.|.|   ..|.
 Frog  1229 MH-------PRVGETLKNLAVLRYEEGDFEKAAELYKRAME--------IKETETSVL---GAKA 1275

  Fly   490 RSKAIKEDLDFSEEKNAKP 508
            .|.......|....:||.|
 Frog  1276 HSGHSSSGGDTYSVQNALP 1294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_001261780.1 TPR_12 185..258 CDD:315987 26/72 (36%)
TPR repeat 187..214 CDD:276809 9/26 (35%)
TPR_12 226..302 CDD:315987 33/99 (33%)
TPR repeat 228..256 CDD:276809 10/27 (37%)
TPR_12 269..344 CDD:315987 38/74 (51%)
TPR repeat 270..298 CDD:276809 12/27 (44%)
TPR_12 310..384 CDD:315987 29/73 (40%)
TPR repeat 311..341 CDD:276809 13/29 (45%)
TPR_12 353..469 CDD:315987 33/124 (27%)
TPR repeat 354..381 CDD:276809 9/26 (35%)
nphp3NP_001072733.2 Uso1_p115_C 90..180 CDD:282695
OmpH <101..>183 CDD:281871
TPR 1 878..912 7/43 (16%)
TPR_12 915..990 CDD:290160 18/77 (23%)
TPR_10 915..955 CDD:290111 6/42 (14%)
TPR 2 916..949 5/35 (14%)
TPR repeat 916..944 CDD:276809 5/30 (17%)
TPR_12 954..1032 CDD:290160 29/77 (38%)
TPR_10 957..996 CDD:290111 13/38 (34%)
TPR repeat 957..987 CDD:276809 10/29 (34%)
TPR 3 958..991 12/32 (38%)
TPR 4 1000..1033 13/32 (41%)
TPR repeat 1000..1028 CDD:276809 10/27 (37%)
TPR_12 1064..1140 CDD:290160 38/75 (51%)
TPR_10 1066..1106 CDD:290111 21/39 (54%)
TPR 5 1066..1099 16/32 (50%)
TPR repeat 1066..1094 CDD:276809 12/27 (44%)
TPR_12 1104..1182 CDD:290160 31/78 (40%)
TPR repeat 1107..1142 CDD:276809 15/34 (44%)
TPR_10 1108..1147 CDD:290111 18/38 (47%)
TPR 6 1108..1141 15/32 (47%)
SNAP 1124..>1270 CDD:305195 48/161 (30%)
TPR repeat 1124..1182 CDD:276937 22/58 (38%)
TPR repeat 1147..1178 CDD:276809 10/31 (32%)
TPR 7 1150..1183 9/33 (27%)
TPR repeat 1187..1226 CDD:276937 5/38 (13%)
TPR_12 1188..1265 CDD:290160 22/91 (24%)
TPR_10 1191..1232 CDD:290111 7/47 (15%)
TPR 8 1192..1225 5/32 (16%)
TPR repeat 1192..1220 CDD:276809 4/27 (15%)
TPR repeat 1229..1266 CDD:276937 17/51 (33%)
TPR 9 1234..1267 14/40 (35%)
TPR repeat 1234..1262 CDD:276809 12/27 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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