DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klc and klc1

DIOPT Version :9

Sequence 1:NP_001261780.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_012823938.1 Gene:klc1 / 550001 XenbaseID:XB-GENE-855889 Length:634 Species:Xenopus tropicalis


Alignment Length:519 Identity:357/519 - (68%)
Similarity:429/519 - (82%) Gaps:29/519 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQMSQDEIITNTKTVLQGLEALRVEHVSIMNGIAE----VQKDN------EKSDMLRKNIENIE 55
            :.:::|||||:.||.|:||||||:.||.||:..:.|    ::||:      |||:|:||::|.:|
 Frog    16 LEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNLVEEKSNMIRKSLEMLE 80

  Fly    56 LGLSEAQVMMALTSHLQNIEAEKHKLKTQVRRLHQENAWLRDELANTQQKFQASEQLVAQLEEEK 120
            ||||||||||||::||..:|:||.||:.|||||.|||.||||||||||||.|.|||.||||||||
 Frog    81 LGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQQKLQRSEQSVAQLEEEK 145

  Fly   121 KHLEFMASVKKYDEN-QEQDDACDKSRTDPVVELFPDEEN------EDRHNMSPTPPSQFANQTS 178
            ||||||..:||||:: ...||....|..:.:.:|||::::      :.:|:.:..     |.|..
 Frog   146 KHLEFMNQLKKYDDDISPSDDKDSDSSKETLDDLFPNDDDDPGQGIQQQHSSAAA-----AAQQG 205

  Fly   179 GYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNK 243
            |||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||
 Frog   206 GYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNK 270

  Fly   244 YKEAANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDH 308
            ||:|||||||||:||.||||::|||||||||||||||||||||::||||||||||||||||||||
 Frog   271 YKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYREAEPLCKRALEIREKVLGKDH 335

  Fly   309 PDVAKQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEA 373
            ||||||||||||||||||||:|||.||||||:||::|||||||||||||||||.||||||::.:|
 Frog   336 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 400

  Fly   374 EILYKQVLTRAHEREFGAIDSKNKPIWQVAEEREEHKFDNRENTPYGEYGGWHKAAKVDSPTVTT 438
            |.|||::||||||||||::|.:|||||..|||||:.|...::.| :||||||:||.|||||||||
 Frog   401 ETLYKEILTRAHEREFGSVDDENKPIWMHAEEREKFKGKQKDGT-FGEYGGWYKACKVDSPTVTT 464

  Fly   439 TLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTKLSQLLT---SNEKRRSKAIKEDLD 499
            |||||||||||||.||||:|||:.|:||:|:|.|.|.:.:::::|.   |.|||||   :|.||
 Frog   465 TLKNLGALYRRQGKFEAADTLEEAAIRSRKQALDNAHKQRVAEVLNDPESIEKRRS---RESLD 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_001261780.1 TPR_12 185..258 CDD:315987 69/72 (96%)
TPR repeat 187..214 CDD:276809 26/26 (100%)
TPR_12 226..302 CDD:315987 68/75 (91%)
TPR repeat 228..256 CDD:276809 26/27 (96%)
TPR_12 269..344 CDD:315987 69/74 (93%)
TPR repeat 270..298 CDD:276809 25/27 (93%)
TPR_12 310..384 CDD:315987 60/73 (82%)
TPR repeat 311..341 CDD:276809 27/29 (93%)
TPR_12 353..469 CDD:315987 83/115 (72%)
TPR repeat 354..381 CDD:276809 19/26 (73%)
klc1XP_012823938.1 SMC_prok_B 35..>149 CDD:274008 72/113 (64%)
TPR_12 212..287 CDD:315987 71/74 (96%)
TPR repeat 214..241 CDD:276809 26/26 (100%)
TPR_12 253..329 CDD:315987 68/75 (91%)
TPR repeat 255..283 CDD:276809 26/27 (96%)
TPR_12 296..370 CDD:315987 68/73 (93%)
TPR repeat 297..325 CDD:276809 25/27 (93%)
TPR_12 337..411 CDD:315987 60/73 (82%)
TPR repeat 338..368 CDD:276809 27/29 (93%)
TPR_12 380..495 CDD:315987 83/115 (72%)
TPR repeat 381..408 CDD:276809 19/26 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3209
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4056
Inparanoid 1 1.050 692 1.000 Inparanoid score I674
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D238239at33208
OrthoFinder 1 1.000 - - FOG0002344
OrthoInspector 1 1.000 - - otm49194
Panther 1 1.100 - - O PTHR45783
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1545
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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