DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klc and klc-2

DIOPT Version :9

Sequence 1:NP_001261780.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001023664.1 Gene:klc-2 / 178942 WormBaseID:WBGene00002215 Length:540 Species:Caenorhabditis elegans


Alignment Length:492 Identity:330/492 - (67%)
Similarity:384/492 - (78%) Gaps:27/492 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQMSQDEIITNTKTVLQGLEALRVEHVSIMN----GIAEVQKD-----NEKSDMLRKNIENIEL 56
            |:.||||::.|..:||.|||||||.||.:|.|    .:..|::|     .:|...:..|::.:..
 Worm     1 MSNMSQDDVTTGLRTVQQGLEALREEHSTISNTLETSVKGVKEDEAPLPKQKLSQINDNLDKLVC 65

  Fly    57 GLSEAQVMMALTSHLQNIEAEKHKLKTQVRRLHQENAWLRDELANTQQKFQASEQLVAQLEEEKK 121
            |:.|..:|:.:....|.::|:..|.:.|.|||.||||||||||::||.|.|.|||:|||||||.|
 Worm    66 GVDETSLMLMVFQLTQGMDAQHQKYQAQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQLEEENK 130

  Fly   122 HLEFMASVKKYDENQEQDDACDKSRTD----PVV-----ELFPDEENEDRHNMS----PTPPSQF 173
            ||::|||:|::|:..:.|   .|:..|    ||.     ||....|:|:..|.|    |||.:|.
 Worm   131 HLKYMASIKQFDDGTQSD---TKTSVDVGPQPVTNETLQELGFGPEDEEDMNASQFNQPTPANQM 192

  Fly   174 ANQTS-GYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALV 237
            |...: |||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||
 Worm   193 AASANVGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALV 257

  Fly   238 YRDQNKYKEAANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREK 302
            |||||||||||||||:|||||.|.|||:||||||||||||||:|||||:||||||||||||||||
 Worm   258 YRDQNKYKEAANLLNEALSIREKCLGESHPAVAATLNNLAVLFGKRGKFKDAEPLCKRALEIREK 322

  Fly   303 VLGKDHPDVAKQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQ 367
            |||.||||||||||||||||||||||:||||||:|||:||||||||||||||||||||:..||||
 Worm   323 VLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQ 387

  Fly   368 GRYTEAEILYKQVLTRAHEREFGAIDSKNKPIWQVAEEREEHKFDNRENTPYGEYGGWHKAAKVD 432
            |:|.|||.||||:||||||||||.|..:||||||:||||||:|... |.....|..||.||||||
 Worm   388 GKYKEAEELYKQILTRAHEREFGQISGENKPIWQIAEEREENKHKG-EGATANEQAGWAKAAKVD 451

  Fly   433 SPTVTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKE 469
            |||||||||||||||||||.:||||||||.|:|:||:
 Worm   452 SPTVTTTLKNLGALYRRQGKYEAAETLEDVALRAKKQ 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_001261780.1 TPR_12 185..258 CDD:315987 70/72 (97%)
TPR repeat 187..214 CDD:276809 26/26 (100%)
TPR_12 226..302 CDD:315987 69/75 (92%)
TPR repeat 228..256 CDD:276809 26/27 (96%)
TPR_12 269..344 CDD:315987 68/74 (92%)
TPR repeat 270..298 CDD:276809 25/27 (93%)
TPR_12 310..384 CDD:315987 63/73 (86%)
TPR repeat 311..341 CDD:276809 27/29 (93%)
TPR_12 353..469 CDD:315987 85/115 (74%)
TPR repeat 354..381 CDD:276809 20/26 (77%)
klc-2NP_001023664.1 MreC <92..>143 CDD:302802 35/50 (70%)
TPR_12 203..280 CDD:290160 74/76 (97%)
TPR_10 206..246 CDD:290111 38/39 (97%)
TPR repeat 207..234 CDD:276809 26/26 (100%)
TPR_12 244..322 CDD:290160 71/77 (92%)
TPR_10 247..287 CDD:290111 35/39 (90%)
TPR repeat 248..276 CDD:276809 26/27 (96%)
TPR_12 286..364 CDD:290160 71/77 (92%)
TPR_10 289..330 CDD:290111 37/40 (93%)
TPR repeat 290..318 CDD:276809 25/27 (93%)
TPR_12 328..406 CDD:290160 67/77 (87%)
TPR_10 331..372 CDD:290111 37/40 (93%)
TPR repeat 331..361 CDD:276809 27/29 (93%)
TPR_12 370..488 CDD:290160 88/118 (75%)
TPR_10 373..410 CDD:290111 29/36 (81%)
TPR repeat 374..401 CDD:276809 20/26 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160390
Domainoid 1 1.000 140 1.000 Domainoid score I2959
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4056
Inparanoid 1 1.050 623 1.000 Inparanoid score I478
Isobase 1 0.950 - 0 Normalized mean entropy S2043
OMA 1 1.010 - - QHG48047
OrthoDB 1 1.010 - - D238239at33208
OrthoFinder 1 1.000 - - FOG0002344
OrthoInspector 1 1.000 - - oto18513
orthoMCL 1 0.900 - - OOG6_102564
Panther 1 1.100 - - LDO PTHR45783
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2596
SonicParanoid 1 1.000 - - X1545
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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