DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klc and klc-1

DIOPT Version :9

Sequence 1:NP_001261780.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001255534.1 Gene:klc-1 / 178007 WormBaseID:WBGene00002214 Length:536 Species:Caenorhabditis elegans


Alignment Length:515 Identity:226/515 - (43%)
Similarity:311/515 - (60%) Gaps:53/515 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DEIITNTKTVLQGLEALRVEHVS---------IMNGIAEVQKDNEKSDMLRKNIENIELGLSEAQ 62
            |:|.|..|||.|.|.|||.||.:         |.:..:|....:||..::.:::..:..|..||.
 Worm    27 DDITTVLKTVQQTLFALRDEHEAATRILEANLINSDSSEPSLPSEKMGLIDESLGKVMDGGDEAS 91

  Fly    63 VMMALTSHLQNIEAEKHKLKTQVRRLHQENAWLRDELANTQQKFQASEQLVAQLEEEKKHLEFMA 127
            :::.:...:|:.:.:..|....:|.|.|||.||.|||..||:|.|.||:.||.||||:.|.:|..
 Worm    92 LLIMMDKLMQSYDVQLSKNHESIRLLRQENTWLLDELTTTQRKLQESERTVAHLEEERDHYKFQD 156

  Fly   128 SVKKYDENQEQDDACDKS--RTDPVVELFPDEENEDRHNMSPTP---PSQFANQTSG-YEIPARL 186
            |:...:.:.:...:.|.:  ..|.:.||....|.||::|.....   .|.|:|..|. |::|.||
 Worm   157 SMNYLNSDFQHTTSVDATPMMVDTLQELGFGPEEEDQNNNQADQGCRSSSFSNPISNDYQLPTRL 221

  Fly   187 RTLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNKYKEAANLL 251
            :||.||||||..|||:|||:|||||||||:.:..|:.|.|||||||:||:|||:|..:|:||..|
 Worm   222 QTLQNLVIQYMEQGRFEVAIPLCKQALEDVVKVHGNVHLDVATMLNVLAIVYRNQENFKDAAIYL 286

  Fly   252 NDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHPDVAKQLN 316
            ..|||||.:..||||.:|||||||||:.||||||||::|||||||||||:.:||.:||||||||.
 Worm   287 EKALSIRVQCCGENHHSVAATLNNLAIAYGKRGKYKESEPLCKRALEIRKNLLGPNHPDVAKQLT 351

  Fly   317 NLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEAEILYKQVL 381
            ||.::.|...||:|.|.|:::||.||......:..||.||||.||..:||||:|.|||.:||.:|
 Worm   352 NLGIVTQQLEKYEETENYFKQALSIYNRAFPENHQNVIKTKNQLASVFLKQGKYQEAEEMYKNIL 416

  Fly   382 TRAHEREFGAIDSKNKPIWQVAEEREEHKFDNRENTPYGEYGGWHKAAKVD------SPT----- 435
            ::.      || :.|||||::||:|||.:   |...|           |||      :||     
 Worm   417 SKV------AI-TGNKPIWRIAEDREERQ---RNGIP-----------KVDDESFNVNPTTVMDS 460

  Fly   436 -VTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTKLSQLLTSNEKRRSKAI 494
             |.:|:|||.|:||:||..|||.|||: |:.:||:....|..|.    .|::....|.|:
 Worm   461 NVMSTIKNLAAVYRKQGKEEAAGTLEE-ALGAKKQINGGADHTN----STASSVETSSAV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_001261780.1 TPR_12 185..258 CDD:315987 47/72 (65%)
TPR repeat 187..214 CDD:276809 20/26 (77%)
TPR_12 226..302 CDD:315987 54/75 (72%)
TPR repeat 228..256 CDD:276809 16/27 (59%)
TPR_12 269..344 CDD:315987 50/74 (68%)
TPR repeat 270..298 CDD:276809 23/27 (85%)
TPR_12 310..384 CDD:315987 37/73 (51%)
TPR repeat 311..341 CDD:276809 15/29 (52%)
TPR_12 353..469 CDD:315987 55/127 (43%)
TPR repeat 354..381 CDD:276809 16/26 (62%)
klc-1NP_001255534.1 TPR_12 220..293 CDD:315987 47/72 (65%)
TPR repeat 222..249 CDD:276809 20/26 (77%)
TPR_12 261..337 CDD:315987 54/75 (72%)
TPR repeat 263..291 CDD:276809 16/27 (59%)
TPR repeat 296..334 CDD:276809 29/37 (78%)
TPR_12 303..379 CDD:315987 50/75 (67%)
TPR repeat 347..375 CDD:276809 13/27 (48%)
TPR repeat 389..417 CDD:276809 16/27 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160389
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2043
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D238239at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45783
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.860

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