DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klc and Klc3

DIOPT Version :9

Sequence 1:NP_001261780.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_006228441.1 Gene:Klc3 / 171549 RGDID:621432 Length:516 Species:Rattus norvegicus


Alignment Length:391 Identity:245/391 - (62%)
Similarity:300/391 - (76%) Gaps:13/391 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QMSQDEIITNTKTVLQGLEALRVEHVSIMNGIAE----------VQKDNEKSDMLRKNIENIELG 57
            :::.:|::..|:.|:|||||||.||.|:...:||          |:...||..::..::|.||||
  Rat    17 RLNPEELVRQTRQVVQGLEALRAEHHSLAGHLAEALAGPGPVAGVELLEEKQQVVNHSLEAIELG 81

  Fly    58 LSEAQVMMALTSHLQNIEAEKHKLKTQVRRLHQENAWLRDELANTQQKFQASEQLVAQLEEEKKH 122
            |.||||::||::|:..:||||.:|:.|.|||.|||.|||:||..||::.:|||:.||||||||.|
  Rat    82 LGEAQVLLALSAHVGVLEAEKQRLRAQARRLAQENTWLREELEETQRRLRASEEAVAQLEEEKSH 146

  Fly   123 LEFMASVKKYDENQEQDDACDKSRTDPVVELFPDEENEDRHNMSPTPPSQFANQTSGYEIPARLR 187
            |:|:..:::||..:|........|.|.:..|||.||.|.:   .|......|.|..|||||||||
  Rat   147 LQFLGQLRQYDPPEESQRPDSPPRRDSLASLFPSEEEEKK---GPEAAGAAAAQQGGYEIPARLR 208

  Fly   188 TLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNKYKEAANLLN 252
            ||||||||||||||||||||||:||||||||:|||.||||||||||||||||||||||||..||:
  Rat   209 TLHNLVIQYASQGRYEVAVPLCRQALEDLERSSGHCHPDVATMLNILALVYRDQNKYKEATELLH 273

  Fly   253 DALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHPDVAKQLNN 317
            |||.||.:|||..|||||||||||||||||||:|::|||||:|||||||||||.|||||||||||
  Rat   274 DALQIREQTLGPEHPAVAATLNNLAVLYGKRGRYREAEPLCQRALEIREKVLGADHPDVAKQLNN 338

  Fly   318 LALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEAEILYKQVLT 382
            ||||||||||:.:||::|.|||.|||:..||.||||||||||||..||||.:|.:||.|||::|:
  Rat   339 LALLCQNQGKFQDVERHYARALSIYEALGGPQDPNVAKTKNNLASAYLKQNKYQQAEELYKEILS 403

  Fly   383 R 383
            :
  Rat   404 Q 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_001261780.1 TPR_12 185..258 CDD:315987 65/72 (90%)
TPR repeat 187..214 CDD:276809 25/26 (96%)
TPR_12 226..302 CDD:315987 63/75 (84%)
TPR repeat 228..256 CDD:276809 24/27 (89%)
TPR_12 269..344 CDD:315987 62/74 (84%)
TPR repeat 270..298 CDD:276809 23/27 (85%)
TPR_12 310..384 CDD:315987 52/74 (70%)
TPR repeat 311..341 CDD:276809 23/29 (79%)
TPR_12 353..469 CDD:315987 20/31 (65%)
TPR repeat 354..381 CDD:276809 18/26 (69%)
Klc3XP_006228441.1 SMC_prok_B 21..>148 CDD:274008 62/126 (49%)
TPR_12 206..281 CDD:315987 67/74 (91%)
TPR repeat 208..235 CDD:276809 25/26 (96%)
TPR_12 247..323 CDD:315987 63/75 (84%)
TPR repeat 249..277 CDD:276809 24/27 (89%)
TPR_12 290..365 CDD:315987 62/74 (84%)
TPR repeat 291..319 CDD:276809 23/27 (85%)
TPR_12 331..402 CDD:315987 51/70 (73%)
TPR repeat 332..362 CDD:276809 23/29 (79%)
TPR repeat 375..403 CDD:276809 18/27 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D238239at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45783
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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