DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp69D and ptprq

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_021323628.1 Gene:ptprq / 555426 ZFINID:ZDB-GENE-050419-183 Length:2896 Species:Danio rerio


Alignment Length:1392 Identity:300/1392 - (21%)
Similarity:481/1392 - (34%) Gaps:432/1392 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 NIKDSGNYTCTAQTGQNHSTEFQVRPYLPSKVLQSTP-DRIKRKIKQDVMLYCL----IEMYPQN 162
            :|..:.|.|.|..|........::|.|.| .::..|| ......:....||:..    :...|..
Zfish  1629 SINRTVNMTITKTTTDTIYLFTKLRKYFP-YIINVTPATSAGSAVNHTTMLHLRTDEDVPSSPPL 1692

  Fly   163 ETTNRNL-------KWL----KDGSQFEFLDTFSSISKLN-----DTHL---------NFTLEFT 202
            ..:|:||       .|.    .:|...|:.......|..|     :|||         .:.|...
Zfish  1693 SGSNKNLSSTSIQVSWFPPVEANGEIIEYAVNLQGPSTSNKNYTSETHLVLSELTPFTPYNLSIA 1757

  Fly   203 EVYKKENGTYKCTVF----DDTGLEITSKEITLFVMEVPQVSIDFAKAVGANKIYLNWTVN-DGN 262
            .|.:.  ||....|.    |:.|.....:.:|:|...             ||.::|.|..: :.|
Zfish  1758 AVTRV--GTGPPVVLSLHTDEAGPMSPPRNLTIFNHT-------------ANSVWLQWEPSPEPN 1807

  Fly   263 DPIQKFFITLQEAGTPTFTYHKDFINGSHTSYILDHFKPNTTYFLRIVGKNSIGNGQPTQYPQGI 327
            ..:|.:...:.|..|.:|.|...  :.:.|...|..|||:.:|.:.:......|||.....|...
Zfish  1808 GVVQLYGFRILELNTDSFRYQNS--SDASTQAELGGFKPHNSYEISVCTFTRAGNGDQYSLPVLF 1870

  Fly   328 TT---------------LSYDPIFIP--------------------------KVETTGSTASTIT 351
            ||               |.:|.:::.                          .|..|.:.|.|:|
Zfish  1871 TTNESVSDAVGNLSCSGLDWDSVYMEWELPDHPNGEILYYLIRSGDLEDEAHPVVLTHTVAHTLT 1935

  Fly   352 IGWNP--------------------------PPPDL-----IDYIQ--------------YYELI 371
             |.:|                          ||..:     ::|:.              :.:::
Zfish  1936 -GLSPHAFYLITVAAVNSAGVGEEANCSAHTPPESVVHKKGVNYVPFNVESFQAVQNCFFFCDVL 1999

  Fly   372 VSES----------------------GEVP---------KVIEEAI------------------- 386
            .|:|                      ..||         .|..:::                   
Zfish  2000 ASQSFLSLHSSLHSQTQKIQHCFLSPSAVPGPSHSLTVTDVTSDSVSVSWQRPVHVPGLLQGYNV 2064

  Fly   387 -YQQNSRNLPYMFDKLKTATD----------------------YEFRVRACSDLTKTCGPWSENV 428
             .:|.|||......::::..:                      .::|:|..:......|..||.:
Zfish  2065 EIEQLSRNCERQQQQVESCMEAQILEWVEGETTRATLTSLLKYRQYRIRVVAFTRAGAGEPSEWI 2129

  Fly   429 NGTTMDGVATKPTN-LSIQCHHDNVTRGNSIAINWDVPKTPNGKVVSYLIHLLGNPMSTVDREMW 492
            ...|:.|....|.. :|:      |...|.:.|.||.|...:|. .||:|.:     :.:|...:
Zfish  2130 YTQTLAGNPDAPPGAISV------VPSANGLKIEWDKPSVISGP-TSYIIDI-----TALDGSGY 2182

  Fly   493 GPKIRRIDEPHHKTLYESVSPNTNYTVTVSAITRHKKNGEPATGSCLMPVSTPDAIGRTMWSKVN 557
            ...:.|..|.....:..::|..|.::||::|.|....|.. ..|....||     :.||:..:..
Zfish  2183 NITLVRHSEEIRTVIVGNLSAFTLHSVTITAFTGPLSNAR-RDGKASEPV-----LIRTLEDEPK 2241

  Fly   558 LDSKYVLKLYLPK-----------ISERNGPICCYRLYLVR-------------INNDN------ 592
            ...|.|....:|:           ..|.||.|..||:.:.|             |:|.|      
Zfish  2242 DPPKNVTLTVIPEEVTRVYVTFSPPDEPNGNISAYRVDIYRNGQLDFFINSLSVISNPNNTMTAI 2306

  Fly   593 ----------------------------------KELPDPEK-----LNIATYQEVHSDNVTRSS 618
                                              |..|.|:|     ||.|      ...::.|.
Zfish  2307 IDGLKGGFNYSIRIAAVNGAGFGPSSEVHVTTGVKAPPKPKKTPRAALNSA------GVIISTSK 2365

  Fly   619 AYIAEMISSKYFRPEIFLGDEKRFSENNDIIRDNDEICRKCLEGTPFLRKPEIIHIPP----QGS 679
            ....||       ||.|..|:                     .|.  ::|.::|...|    .|:
Zfish  2366 TITIEM-------PECFFTDD---------------------HGP--IQKVQVIVSEPAVMDYGN 2400

  Fly   680 LSNSDS-----ELPILSEKDNLIKGANLTEHALKILESKLRDKRNAVTSDENPILS---AVNPNV 736
            |||..|     ..|.|:: |..     |.....|..|......:..|..::...||   ....|.
Zfish  2401 LSNWKSVFLHPTAPYLTD-DGF-----LNPECPKNSERMSSSTKTYVIGEDEGCLSEDAETLCNG 2459

  Fly   737 PLHDSSRDVFD-GEIDINSNYTGFLEIIVRDRNNALMAYSKYFDIITPATEAEPIQSLNNMDYYL 800
            ||...:..||. ...:|...:|.                |:|.|.:..|.:     .|...|..:
Zfish  2460 PLKPKTHYVFKFRATNIRGQFTD----------------SEYSDKVRTADD-----RLLTRDEQI 2503

  Fly   801 SIGVKAGAVLLGVIL-VFIVLWVF-----HHKK----TKNELQGE---------------DTLTL 840
            .:|     |||...| :|::|.::     |.:|    |.:..|.|               |....
Zfish  2504 ILG-----VLLSFFLALFLILIIYGSVKIHRRKKEGGTYSPRQAEIIETKFKLDQLIAVADLELK 2563

  Fly   841 RDSLSRALFGRRNHNHSHFITSGNHKGFDAGPIHRLDLENAYKNRHKDTDYGFLREYEMLPNRFS 905
            .:.::|.|..|::                ..||.:.......::...:.:..|..|:..||....
Zfish  2564 EEKINRLLSYRKS----------------LKPISKKSFLQHVEDLCANDNAKFQEEFAELPKLLQ 2612

  Fly   906 DRTTKNSDLKENACKNRYPDIKAYDQTRVKLAVINGLQTTDYINANFVIGYKERKKFICAQGPME 970
            |..|.::||..|..|||:.:||.|:.:||||....|:..:|||||:||.||....:||..|||:.
Zfish  2613 DLATSDADLPWNRSKNRFTNIKPYNNSRVKLLSEPGMPGSDYINASFVSGYLCPNEFIATQGPLP 2677

  Fly   971 STIDDFWRMIWEQHLEIIVMLTNLEEYNKAKCAKYWPEKVFDTKQFGDILVKFAQERKTGDYIER 1035
            ||:.||||||||...:.|||||...|..:.:|.:||||.......|.||::....|....|:..|
Zfish  2678 STVADFWRMIWETGTKTIVMLTQCFEKGRIRCHQYWPEDNKPVTVFADIIITKLTEDVRPDWTVR 2742

  Fly  1036 TLNVSKNKANVGEEEDRRQITQYHYLTWKDFMAPEHPHGIIKFIRQINSVYSLQRGPILVHCSAG 1100
            .|.|.::.:.:       .:..::|.:|.:...||....:::|::.:.|....:...|:||||||
Zfish  2743 ALKVERHGSYM-------IVHHFNYTSWPEHGVPESSSTLVQFVKAVRSNRGHENTTIVVHCSAG 2800

  Fly  1101 VGRTGTLVALDSLIQQLEEEDSVSIYNTVCDLRHQRNFLVQSLKQYIFLYRALLD-TGTFGNTDI 1164
            |||||..:|||.|||.|.:.:.|.||..|.:||.:|..:||:|.||:||:::.|| ....||:..
Zfish  2801 VGRTGVFIALDHLIQHLRDHEFVDIYGLVAELRSERMCMVQNLAQYMFLHQSTLDLLSAKGNSQS 2865

  Fly  1165 CIDTMASAIESL-KRKPNEGKCKLEVE 1190
            ......||:|.: .....||..:||.|
Zfish  2866 IWFVNYSALEKMDSLDAMEGDVELEWE 2892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653 23/127 (18%)
Ig 150..221 CDD:143165 20/103 (19%)
fn3 237..321 CDD:278470 19/84 (23%)
FN3 339..432 CDD:238020 24/210 (11%)
FN3 439..535 CDD:238020 22/96 (23%)
PTPc 892..1155 CDD:214550 102/262 (39%)
PTPc 920..1155 CDD:238006 93/234 (40%)
PHA02694 <1121..1206 CDD:177476 26/72 (36%)
PTPc 1186..1449 CDD:214550 3/5 (60%)
PTPc 1216..1449 CDD:238006
ptprqXP_021323628.1 fn3 209..278 CDD:306538
FN3 301..363 CDD:328772
FN3 382..470 CDD:238020
FN3 475..569 CDD:238020
FN3 723..808 CDD:238020
FN3 829..>864 CDD:238020
FN3 <1033..1067 CDD:238020
FN3 1072..1161 CDD:238020
fn3 1170..1241 CDD:306538
fn3 1264..1340 CDD:306538
fn3 1368..>1410 CDD:306538
FN3 1460..1549 CDD:238020
FN3 1585..1670 CDD:214495 10/41 (24%)
FN3 1697..1768 CDD:238020 14/72 (19%)
FN3 1781..1872 CDD:238020 22/105 (21%)
fn3 1878..1958 CDD:306538 9/80 (11%)
FN3 2029..2133 CDD:238020 11/103 (11%)
FN3 2141..2235 CDD:238020 25/111 (23%)
FN3 2242..2338 CDD:238020 13/95 (14%)
UP_III_II 2354..>2491 CDD:297589 38/194 (20%)
PTPc 2599..2855 CDD:214550 102/262 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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