DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp69D and csw

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster


Alignment Length:526 Identity:120/526 - (22%)
Similarity:179/526 - (34%) Gaps:210/526 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   892 GFLREYEMLPNRFSDRTTKNSDLK-ENACKNRYPDIKAYDQTRVKLA-VINGLQTTDYINANFV- 953
            ||..|:|.|.....|..::|...| ||..||||.:|..||.|||||. |.:.:...:|||||:: 
  Fly   326 GFWEEFESLQQDSRDTFSRNEGYKQENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEYINANYIR 390

  Fly   954 ----------------------------------------------------------------- 953
                                                                             
  Fly   391 LPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNCATCS 455

  Fly   954 ----------------------------------------------------------------- 953
                                                                             
  Fly   456 RKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRHSN 520

  Fly   954 -------IGYKER---------KKFICAQG----PMESTIDDFWRMIWEQHLEIIVMLTNLEEYN 998
                   |...||         |.:|..||    ...:|:.|||.|:|:::..:|||.|...|..
  Fly   521 DSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERG 585

  Fly   999 KAKCAKYWPEKVFDTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEEDRRQITQYHYLTW 1063
            |.|||:|||:: ..::|||...::...|..|.||..|...||      ..::..|:|..||:..|
  Fly   586 KEKCARYWPDE-GRSEQFGHARIQCVSENSTSDYTLREFLVS------WRDQPARRIFHYHFQVW 643

  Fly  1064 KDFMAPEHPHGIIKFIRQINSVYS------LQRGPILVHCSAGVGRTGTLVALDSLIQQLEE--- 1119
            .|...|..|..::.|::.:|:..|      .:.|||.||||||:|||||.:.:|.::.|:..   
  Fly   644 PDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRNGL 708

  Fly  1120 EDSVSIYNTVCDLRHQRNFLVQSLKQYIFLYRALLD---------------------------TG 1157
            :..:.|..|:..:|.||:.|||:..||.|:|.|:..                           ||
  Fly   709 DTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEEQSLQVGREYTNIKYTG 773

  Fly  1158 TFGNTDICIDTMASAIESLKRKPNEGKCKLEVEFEKLLATADEISK----SCSVGENEENNMKNR 1218
            ..|| |.....:..||.|:...|::         ..|..|:.::..    |..||....|...::
  Fly   774 EIGN-DSQRSPLPPAISSISLVPSK---------TPLTPTSADLGTGMGLSMGVGMGVGNKHASK 828

  Fly  1219 SQEIIP 1224
            .|..:|
  Fly   829 QQPPLP 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653
Ig 150..221 CDD:143165
fn3 237..321 CDD:278470
FN3 339..432 CDD:238020
FN3 439..535 CDD:238020
PTPc 892..1155 CDD:214550 103/424 (24%)
PTPc 920..1155 CDD:238006 93/395 (24%)
PHA02694 <1121..1206 CDD:177476 25/115 (22%)
PTPc 1186..1449 CDD:214550 8/43 (19%)
PTPc 1216..1449 CDD:238006 2/9 (22%)
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc 326..744 CDD:214550 103/424 (24%)
PTPc 543..743 CDD:238006 72/206 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443565
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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