DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp69D and Ptprt

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_038961451.1 Gene:Ptprt / 362263 RGDID:1309653 Length:1504 Species:Rattus norvegicus


Alignment Length:1562 Identity:368/1562 - (23%)
Similarity:630/1562 - (40%) Gaps:340/1562 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VQGSVKQEWAEIGKNVSLECASENEAVAWKLGNQTI-----NKNHTRY------KIRTEPLKSND 79
            |.|.|.:.|.:....:|         ..|....|.|     .|.|..|      ::...|.:.  
  Rat   142 VSGVVTEGWVKAELAIS---------TFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRK-- 195

  Fly    80 DGSENNDSQDFIKYKNVLALLDVNIKDSGNYTCTAQTGQNHSTEFQVRPYLPSKVLQSTPDRIKR 144
                   :..|::.:||    :||:..:..:.|.|  |...|..                |::  
  Rat   196 -------APHFLRLQNV----EVNVGQNATFQCIA--GGKWSQH----------------DKL-- 229

  Fly   145 KIKQDVMLYCLIEMYPQNETTNRNLKWLKDGSQFEFLDTFSSISK-LNDTHLNFTLEFTEVYKKE 208
                                      ||:   |:...||...::: :|....:.|:...:..::.
  Rat   230 --------------------------WLQ---QWNGRDTALMVTRVVNHRRFSATVSVADTSQRS 265

  Fly   209 NGTYKCTVFDDTGLEITSKEITLFVMEVP-QVSIDFAKAVGANKIYLNWTVND--GNDPIQKFFI 270
            ...|:|.:..|.|..: |....|.|.|.| .::.....||||..:::....|.  |:.||   .:
  Rat   266 VSKYRCVIRSDGGSGV-SNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGDGPI---IL 326

  Fly   271 TLQEAGTPTFTYHKDFINGSHTSYILDHFKPNTTYFLRIV----GKNSIGNGQPTQYPQGITTLS 331
            ...|..|.|.|:.:..|..| .:|.|.|..|:..|.:|::    |:...|   |...|....|..
  Rat   327 KEVEYRTTTGTWAETHIVDS-PNYKLWHLDPDVEYEIRVLLTRPGEGGTG---PPGPPLTTRTKC 387

  Fly   332 YDPIFIPK-VETTGSTASTITIGWNPPPPDLIDY-----------IQYYELIVSESGEVPKVIEE 384
            .||:..|: ||.....|..:|:.|.|     ..|           :||..:...:..|..:||:.
  Rat   388 ADPVHGPQNVEIVDIRARQLTLQWEP-----FGYAVTRCHSYNLTVQYQYVFNQQQYEAEEVIQT 447

  Fly   385 AIYQQNSRNLPYMFDKLK-TATDYEFRVRACSDLTKTCGPWSENVNGTT-MDGVATKPTNLSIQC 447
            :.:.......|:|..:|: ..::.|.|:.:...:.:|    .|:|.|.. ::.:...|..     
  Rat   448 SSHYTLRGLRPFMTIRLRLLLSNPEGRMESEELVVQT----EEDVPGAVPLESIQGGPFE----- 503

  Fly   448 HHDNVTRGNSIAINWDVPKTPNGKVVSYLIH--LLGNPMSTVDREMWGPKIRRI-DEPHHKTLYE 509
                    ..|.|.|..|...||.:..|.|:  .:|:...:.|......|:.:: :|.||  |:.
  Rat   504 --------EKIYIQWKPPNETNGVITLYEINYKAVGSLDPSADLSSQRGKVFKLRNETHH--LFV 558

  Fly   510 SVSPNTNYTVTVSAITRHKKNGEPATGSCLMPVSTPDAIGRTMWSKVNLDSKYVLKLYLPKISER 574
            .:.|.|.|:.|:.|.|. |..|.|.|......:|.|........|.:| ::...:.:.|.....|
  Rat   559 GLYPGTTYSFTIKASTA-KGFGPPVTTRIATKISAPSMPEYDADSPLN-ETDTTITVMLKPAQSR 621

  Fly   575 NGPICCYRLYLVRINNDNKELPDPEKLNIATYQEVHSDNVTRSSAYIAEMISSKYFRPEI----- 634
            ..|:..|:|.:       ||....:....|...|..|..|:..:|  :.:.|..||..|:     
  Rat   622 GAPVSVYQLVV-------KEERLQKSRRAADIIECFSVPVSYRNA--SNLDSLHYFAAELKPSNL 677

  Fly   635 ------FLGDEKRFSEN---------------NDIIRDNDEICRKCLE--------------GTP 664
                  .:||.|.::..               ..:.:.|.|....|:.              |||
  Rat   678 PVTQPFTVGDNKTYNGYWNPPLSPLKSYSIYFQALSKANGETKINCVRLATKAPMGSAQVTPGTP 742

  Fly   665 FLRKPEIIHIPPQGSLSNSDSELPILSEK--DNLIKGA------------------------NLT 703
                  :..:....|..||::..|   ||  ||.:|.|                        |..
  Rat   743 ------LCLLTTGASTQNSNTVEP---EKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRRNAY 798

  Fly   704 EHALKILESKLRDKRNAVTS----DENPILSAVNPNVPLHDSSRDVFDGEIDINSNYTGFLEIIV 764
            .::..:.:.||..|:....|    :..|:.|...|...|..:..|  :|....:.:..||.:...
  Rat   799 SYSYYLSQRKLAKKQKETQSGAQREMGPVASTDKPTTKLSTNRND--EGFSSSSQDVNGFTDGSR 861

  Fly   765 RDRNNALMAYSKYFDIITPATEAEPIQSLNNMDYYLSIGVKAGAVLLGVILVFIVLWVFHHKKTK 829
            .:.:...:....:     |....:|::.....|                                
  Rat   862 GELSQPTLTIQTH-----PYRTCDPVEMSYPRD-------------------------------- 889

  Fly   830 NELQGEDTLTLRDSLSRALFGRRNHNHSHFITSGNHKGFDAGPIHRLDLENAYKNRHKDTDYGFL 894
               |.:..:.:.|.|          .|...:..|...||          :..|::.:|.|::|.:
  Rat   890 ---QFQPAIRVADLL----------QHITQMKRGQGYGF----------KEEYEDSYKTTNFGGI 931

  Fly   895 REYEM--LP-NRFSDRTTKNSDLKENACKNRYPDIKAYDQTRVKLAVINGLQTTDYINANFVIGY 956
            .|.|:  || .:.:...|...|  ||..||||.:|.:||.:||:|.|::|...:||||||::.||
  Rat   932 LEQELQALPEGQTASWDTAKED--ENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGY 994

  Fly   957 KERKKFICAQGPMESTIDDFWRMIWEQHLEIIVMLTNLEEYNK--------------------AK 1001
            ...:.:|..||||:.|:.|||||||:::...|||:|||.|..:                    .|
  Rat   995 HRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRHPAEHTVGTATLGRAASPGMVK 1059

  Fly  1002 CAKYWPEKVFDTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEEDRRQITQYHYLTWKDF 1066
            |.:|||:   ||:.:|||.|...:.....:|:.||..|.|.    |..| .|::..:|:.:|.|.
  Rat  1060 CVRYWPD---DTEVYGDIKVTLIETEPLAEYVIRTFTVQKK----GYHE-IRELRLFHFTSWPDH 1116

  Fly  1067 MAPEHPHGIIKFIRQINSVYSLQRGPILVHCSAGVGRTGTLVALDSLIQQLEEEDSVSIYNTVCD 1131
            ..|.:..|::.|:||:..:...:.|||:||||||.||||..:|:|:::...|.|..|.|:|.|.:
  Rat  1117 GVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRE 1181

  Fly  1132 LRHQRNFLVQSLKQYIFLYRALLDTGTFGNTDICIDTMASAIESLKR-KPNEGKCKLEVEFEKL- 1194
            ||.||..|||:.:||:|::.|:|:....|||.|.:....|...::.| .|.....:::.||:.| 
  Rat  1182 LRAQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEFQTLN 1246

  Fly  1195 LATADEISKSCSVGENEENNMKNRSQEIIPYDRNRVILTPLPMRENSTYINASFIEGYDNSETFI 1259
            :.|.....:.||:|....|:.||||.:::|.||....|..:. .|:|.||||:.::.:.....|:
  Rat  1247 IVTPRVRPEDCSIGLLPRNHDKNRSMDVLPLDRCLPFLISVD-GESSNYINAALMDSHKQPAAFV 1310

  Fly  1260 IAQDPLENTIGDFWRMISEQSVTTLVMISEIGDGPRKCPRYWADDEVQ-YDHILVKYVHSESCPY 1323
            :.|.||.||:.||||::.:.:.:::||::|: |..:.|.:||.:.... |..|.|::|.::....
  Rat  1311 VTQHPLPNTVADFWRLVFDYNCSSVVMLNEM-DTAQLCMQYWPEKTSGCYGPIQVEFVSADIDED 1374

  Fly  1324 YTRREFYVTN-CKIDDTLKVTQ-FQYNGWPTVDGEVPEVCRGIIELV---DQAYNHYKNNKNSGC 1383
            ...|.|.:.| .:..|..::.| .||.|||.. .:.|...|.:::.|   ::....|     .|.
  Rat  1375 IIHRIFRICNMARPQDGYRIVQHLQYIGWPAY-RDTPPSKRSLLKAVRRLEKWQEEY-----DGR 1433

  Fly  1384 RSPLTVHCSLGTDRSSIFVAMCILVQHLRLEKCVDICATTRKLRSQRTGLINSYAQYEFLHRAII 1448
            .....|||..|..||..|.|:|.:.:.::.:..:|:....:.||:.::.::.:..||:|::...:
  Rat  1434 EGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVETLEQYKFVYEVAL 1498

  Fly  1449 NY 1450
            .|
  Rat  1499 EY 1500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653 14/94 (15%)
Ig 150..221 CDD:143165 10/71 (14%)
fn3 237..321 CDD:278470 23/90 (26%)
FN3 339..432 CDD:238020 21/105 (20%)
FN3 439..535 CDD:238020 25/98 (26%)
PTPc 892..1155 CDD:214550 108/285 (38%)
PTPc 920..1155 CDD:238006 99/254 (39%)
PHA02694 <1121..1206 CDD:177476 27/86 (31%)
PTPc 1186..1449 CDD:214550 73/269 (27%)
PTPc 1216..1449 CDD:238006 65/238 (27%)
PtprtXP_038961451.1 MAM 36..193 CDD:214533 11/59 (19%)
Ig 200..285 CDD:416386 21/138 (15%)
fn3 298..364 CDD:394996 19/69 (28%)
FN3 394..484 CDD:238020 18/94 (19%)
fn3 506..581 CDD:394996 23/77 (30%)
R-PTPc-T-1 953..1209 CDD:350478 103/265 (39%)
R-PTPc-T-2 1294..1499 CDD:350482 55/211 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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