DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp69D and Ptp4E

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster


Alignment Length:1272 Identity:281/1272 - (22%)
Similarity:492/1272 - (38%) Gaps:261/1272 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 TRYKIRTEP----LKSNDDG------SENNDSQDFIKYKNVLALLDVNIKDSGNYTCTAQTGQNH 120
            |||.....|    |:|.|.|      |:.|..||  :|       :|:.:.:|  |...:|...:
  Fly   528 TRYTRPAAPLIQELRSIDQGLMLSWRSDVNSRQD--RY-------EVHYQRNG--TREERTMATN 581

  Fly   121 STEFQVRPYLPSKVLQSTPDRIKRKIKQDVMLY--CLIEMYPQN---ETTNRN---LKW-LKDGS 176
            .|...:....|....:.....|...::.:...|  .:....|||   :|.:.|   |.| ..:||
  Fly   582 ETSLTIHYLHPGSGYEVKVHAISHGVRSEPHSYFQAVFPKPPQNLTLQTVHTNLVVLHWQAPEGS 646

  Fly   177 QF-EFL-------DTFSSISKLNDTHLNF-TLEFTEVYKKENGTYKCTVFDDTGLEITSKEITLF 232
            .| |::       ..:..||.|::..... .:.:.|.|..:..|....|.....||:   .:|:.
  Fly   647 DFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHPLEL---NVTMP 708

  Fly   233 VMEVPQV---------SIDFAKAVGANKIY-LNWTVNDGNDPIQ-KFFITLQEAGTPTFTYHKDF 286
            ...|..|         ::::.:..|....| |.|...|..|.:: |....|::..:|:       
  Fly   709 PQPVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSPS------- 766

  Fly   287 INGSHTSYILDHFKPNTTYFLRI-VGKNSIGNGQPTQYPQGITTLSYDPIFIPKVETTGSTASTI 350
                 ....::...|...|...: ...|.|.:| .|........|....:||...........||
  Fly   767 -----VRIPIEDLSPGRQYRFEVQASSNGIRSG-TTHLSTRTMPLIQSDVFIANAGHEQGQDETI 825

  Fly   351 TIGWNPPPPDLIDYIQYYELIVSESGEVPKVIEEAIYQQNSRNLPYMFDKLKTATDYEFRVRACS 415
            |:.:.|.|.|...:..|                     :.|...|.:.||.|.|.|.| |..:.|
  Fly   826 TLSYTPTPADSTRFDIY---------------------RFSMGDPTIKDKEKLANDTE-RKLSFS 868

  Fly   416 DLTKTCGPWSENVNGTTMDGVATKPTNLSIQCHHDNVT-------RGNSIAINWDVPKTPNGKVV 473
            .||.  |........|...|||:.|.....:.|...::       ....|.::|..|.   |:..
  Fly   869 GLTP--GKLYNVTVWTVSGGVASLPVQRLYRLHPLPISDLKAIQVAAREITLHWTAPA---GEYT 928

  Fly   474 SYLIHLLGNPMSTVDREMWGPKIRRIDEPHHKTLYESVSPNTNYTVTV--------------SAI 524
            .:.:..|     :.|.|  .|::.:....:.:...:.:.|..|||.||              .::
  Fly   929 DFELQYL-----SADEE--APQLLQNVTKNTEITLQGLRPYHNYTFTVVVRSGSIQGTDFADVSV 986

  Fly   525 TRHKKNGEPATGSCLMPVSTPDAIGRTMWSKV---NLDSKYVLKLYLPKISERNGPICCYRLYLV 586
            :...::..|.:.|.....:.|..:.....|.|   .:..::.|:   |  :|::|||..:     
  Fly   987 STLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTFEWSLE---P--AEQHGPIDYF----- 1041

  Fly   587 RINNDNKELPDPEKLNIATYQ------EVHSDNVTRSSAYIAEMISSKYFRPEIFLGDEKRFSEN 645
            ||...|.:    :..::::|:      :...|.:...:.||..:.:    :..:..|.|:...:.
  Fly  1042 RITCQNAD----DAADVSSYEFPVNATQGKIDGLVPGNHYIFRIQA----KSALGYGAEREHIQT 1098

  Fly   646 NDIIRDNDEICRKCLEGTPFLRKPEIIHIPPQGSLSNSDSELPILSEKDNLIKGAN--LTEHALK 708
            ..|:             .|.:.:|.:  .|.:.|.::|..|   :|.:......|:  :..:.:.
  Fly  1099 MPIL-------------APPVPEPSV--TPLEVSRTSSTIE---ISFRQGYFSNAHGMVRSYTII 1145

  Fly   709 ILESKLRDKRNAVTSDENP---------------ILSAVNPNVPLHDSSRDVFD------GEIDI 752
            |.|    |.....:..|.|               .:...||.:..:.|.:...:      |..:.
  Fly  1146 IAE----DVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFTIGTANC 1206

  Fly   753 NSNYTGFLEIIVRDRNNALMAYSKY---------FDIITPATEAEPIQSLNNMDYYLSIGVKAGA 808
            :.:..|:.       |..|.|.:.|         .|..|....:.|| :....|..: :.....|
  Fly  1207 DKHQAGYC-------NGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPI-TTERSDTVI-VAATVSA 1262

  Fly   809 VLLGVILVFIVLWVFHHKKTKNELQGEDTLTLRDSLSRALFGRRNHNHSHFITSGNHKGFDAGPI 873
            ||| |.:|.:|::..|  :.:...:......::|.|:....|        :||...       |:
  Fly  1263 VLL-VAMVLVVVYCQH--RCQLIRRASKLARMQDELAALPEG--------YITPNR-------PV 1309

  Fly   874 HRLDLENAYKNRHKDTDYGFLREYEMLPNRFSDRTTKNSDLKENACKNRYPDIKAYDQTRVKLAV 938
            |..|....|:....|:|:.|..|:|.|.:...|:....::|..|..|||:.:|..||.:|.||..
  Fly  1310 HVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQP 1374

  Fly   939 INGLQTTDYINANFVIGYKERKKFICAQGPMESTIDDFWRMIWEQHLEIIVMLTNLEEYNKAKCA 1003
            ::....:||||||::.|:...::||..|||:.||.::||||.||.:...|||||...|..:.||.
  Fly  1375 VDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCD 1439

  Fly  1004 KYWP-EKVFDTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEEDRRQITQYHYLTWKDFM 1067
            :||| ::|  ...:|||.|:...:....|:......||:|.       :.|.:..:|:.||.||.
  Fly  1440 QYWPVDRV--AMFYGDIKVQLIIDTHYHDWSISEFMVSRNC-------ESRIMRHFHFTTWPDFG 1495

  Fly  1068 APEHPHGIIKFIRQINSVYSLQRGPILVHCSAGVGRTGTLVALDSLIQQLEEEDSVSIYNTVCDL 1132
            .||.|..:::|:|....|......||:|||||||||:||.:|||.::|.:.:.|.|.|:..|..:
  Fly  1496 VPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAM 1560

  Fly  1133 RHQRNFLVQSLKQYIFLYRALLDTGTFGNTDICIDTMASAIESLKRKPNEG----KCKLE----- 1188
            |.:|.|:||:.:||:.:::.||.. ..|...:..|       ||:...|:|    |..||     
  Fly  1561 RKERVFMVQTEQQYVCIHQCLLAV-LEGKEHLLAD-------SLELHANDGYEVTKIYLERQPQT 1617

  Fly  1189 ----VEFEKLLATADEISKSCSVGENEENNMKNRSQE 1221
                :.....||.|:::.......::|:.:.:.:.|:
  Fly  1618 KMGTLPIRASLAMAEKLDADLMTNKDEDEDQEQQQQQ 1654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653 23/111 (21%)
Ig 150..221 CDD:143165 19/88 (22%)
fn3 237..321 CDD:278470 15/95 (16%)
FN3 339..432 CDD:238020 20/92 (22%)
FN3 439..535 CDD:238020 17/116 (15%)
PTPc 892..1155 CDD:214550 97/263 (37%)
PTPc 920..1155 CDD:238006 90/235 (38%)
PHA02694 <1121..1206 CDD:177476 25/97 (26%)
PTPc 1186..1449 CDD:214550 7/45 (16%)
PTPc 1216..1449 CDD:238006 1/6 (17%)
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020
fn3 247..328 CDD:278470
fn3 343..417 CDD:278470
fn3 443..525 CDD:278470
FN3 548..611 CDD:238020 12/73 (16%)
FN3 620..706 CDD:238020 20/88 (23%)
fn3 708..796 CDD:278470 16/100 (16%)
fn3 824..886 CDD:278470 21/85 (25%)
fn3 902..978 CDD:278470 14/85 (16%)
fn3 1013..1092 CDD:278470 16/96 (17%)
UP_III_II 1106..>1248 CDD:297589 25/158 (16%)
PTPc 1329..1582 CDD:214550 96/261 (37%)
PTPc 1355..1582 CDD:238006 89/235 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443524
Domainoid 1 1.000 156 1.000 Domainoid score I1041
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46470
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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