DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp69D and Ptpn20

DIOPT Version :10

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:NP_001073618.1 Gene:Ptpn20 / 306281 RGDID:1309812 Length:421 Species:Rattus norvegicus


Alignment Length:406 Identity:110/406 - (27%)
Similarity:174/406 - (42%) Gaps:75/406 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   772 MAYSKYFDIITPATEAEPIQSLNNMDYYLSIGVKAGAVLLGVILVFIVLWVFHHKKTKNELQGED 836
            |::|..:|::.|    ||::|.|:.                      .||.......:|.....|
  Rat    60 MSFSNKYDLVFP----EPVESDNDE----------------------TLWDVRDLSHRNRWSSVD 98

  Fly   837 -----------TLTLRDSLSRALFGRRNHNHSH-----FITSGNHKGFDAGPIHRLDLENAYKNR 885
                       |:....|...|:..|.....:.     |.:|.           |..|.:..|..
  Rat    99 PESAGPSKTVSTVLSESSTDTAVSERELTQLAQIRPLIFNSSS-----------RAALRDCLKAL 152

  Fly   886 HKDTDYGFLREY----EMLPNRFSDRTTKNSDLKENACKNRYPDIKAYDQTRVKLAVINGLQTTD 946
            .|..:...:||:    ||:|   .|......:| :|..||||.||..||.|||.|.     :..|
  Rat   153 QKKEELDIIREFLELEEMIP---PDDFKSGYEL-QNRDKNRYRDILPYDSTRVPLG-----KNKD 208

  Fly   947 YINANF--VIGYKERKKFICAQGPMESTIDDFWRMIWEQHLEIIVMLTNLEEYNKAKCAKYWPEK 1009
            ||||::  ::.::|...:|..|||:..||:|||:|:.|.:..:|.|:|...|....||..|||..
  Rat   209 YINASYIRIVNHEEEYFYIATQGPLPDTIEDFWQMVLENNCNVIAMITREIEGGVIKCCSYWPVS 273

  Fly  1010 VFDTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEEDRRQITQYHYLTWKDFMAPEHPHG 1074
            :.:..:|....|.....:.|..::.|...:.|.  :.|:.   ..:....::.|.|...|.....
  Rat   274 LKEPLEFKHFHVLLENFQITQYFVIRIFQIVKK--STGKS---HSVKHLQFIKWPDHGTPASADF 333

  Fly  1075 IIKFIRQINSVYSLQRGPILVHCSAGVGRTGTLVALDSLIQQLEEEDSVSIYNTVCDLRHQRNFL 1139
            .||::|.:..  |...||:||||||||||||..:.:|.:...:|:..|.:|.|.|..:|.||..:
  Rat   334 FIKYVRYVRK--SHITGPLLVHCSAGVGRTGVFICVDVVFCTIEKNYSFNIMNIVTQMRKQRFGM 396

  Fly  1140 VQSLKQYIFLYRALLD 1155
            :|:.:||.|.|..:|:
  Rat   397 IQTKEQYQFCYEIVLE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 Ig_3 35..114 CDD:464046
Ig_3 134..216 CDD:464046
fn3 237..321 CDD:394996
FN3 <300..>524 CDD:442628
PTPc 892..1155 CDD:214550 87/268 (32%)
PTPc 1186..1449 CDD:214550
Ptpn20NP_001073618.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..116 2/22 (9%)
PTP_DSP_cys 209..415 CDD:475123 67/211 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.