DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp69D and Ptprf

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_006502927.1 Gene:Ptprf / 19268 MGIID:102695 Length:1924 Species:Mus musculus


Alignment Length:1808 Identity:438/1808 - (24%)
Similarity:732/1808 - (40%) Gaps:497/1808 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YIFLCAICVQGSVKQEWAEI--GKNVSLECASENEA---VAWKLGNQTINKNHTRYKIRTEPLKS 77
            |:.:..:..:.|:.....|:  |.:|:|.|.:....   |.|.:|.:.:.|              
Mouse   230 YVRVRRVAPRFSIPPSSQEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTK-------------- 280

  Fly    78 NDDGSENNDSQDFIKYKNVLALLDVNIKDSGNYTC-----------TAQ---------------- 115
                     ..:....:|||.|  .|:..|.||||           |||                
Mouse   281 ---------EDEMPVGRNVLEL--SNVMRSANYTCVAISSLGMIEATAQVTVKALPKPPIDLVVT 334

  Fly   116 ---------TGQNHSTE-----------------FQ--------------VRPYL---------- 130
                     |..:.:||                 ||              :.|:.          
Mouse   335 ETTATSVTLTWDSGNTEPVSFYGIQYRAAGTDGPFQEVDGVASTRYSIGGLSPFSEYAFRVLAVN 399

  Fly   131 ------PSKVLQ---------STPDRIK-RKIKQDVMLYCLIEMYPQNE--------------TT 165
                  ||:.::         |.|.|:: |.:....|   |::..|..|              .:
Mouse   400 SIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTM---LVQWEPPEEPNGLVRGYRVYYTPDS 461

  Fly   166 NRNLK-WLKDGSQFEFLDTFSSISKLNDTHLNFTLEFTEVYKKENGTYKCTVFDDTGLEITSKEI 229
            .|.|. |.|..:....|.|..|:.. ..|:....|.||.|   .:|....|:      ::.::: 
Mouse   462 RRPLSAWHKHNTDAGLLTTVGSLLP-GITYSLRVLAFTAV---GDGPPSPTI------QVKTQQ- 515

  Fly   230 TLFVMEVPQVSIDF-AKAVGANKIYLNWTVNDGNDPIQKF---FITLQEAGTPTFTYHKDFINGS 290
                 .||....|| |.|....:|.|:|.: ...:.|.|:   :...::.|    ..||...:.:
Mouse   516 -----GVPAQPADFQANAESDTRIQLSWLL-PPQERIVKYELVYWAAEDEG----QQHKVTFDPT 570

  Fly   291 HTSYILDHFKPNTTYFLRIVGKNSIGNG-------------QPTQYPQGITTLSYDPIFIPKVET 342
             :||.|:..||:|.|..::..::.:|.|             .|:..||.:|.:|           
Mouse   571 -SSYTLEDLKPDTLYHFQLAARSDLGVGVFTPTVEARTAQSTPSAPPQKVTCVS----------- 623

  Fly   343 TGSTASTITIGWNPPPPD-----LIDYIQYYELIVSESGEVPKVIEEAIYQQNSRNLPYMFD--K 400
            ||||  |:.:.|.|||.|     :..|...||.:..|..:  :.:.:.|.:::|     .:|  .
Mouse   624 TGST--TVRVSWVPPPADSRNGIITQYSVAYEAVDGEDRK--RHVVDGISREHS-----SWDLLG 679

  Fly   401 LKTATDYEFRVRACSDLTKTCGPWSENVNGTTMDGVATKPTNLSIQCHHDNVTRGNSIAINWDVP 465
            |:..|:|...|||.:|:..  ||.|..|...|.:.|.:.|.. .::....|.|   ::.::|.:|
Mouse   680 LEKWTEYRVWVRAHTDVGP--GPESSPVLVRTDEDVPSGPPR-KVEVEPLNST---AVHVSWKLP 738

  Fly   466 KTPN---GKVVSYLIHLL--------GNPM---STVDREMWGPKIRRIDEPHHKTLYESVSPNTN 516
             .||   |::..|.:..:        |.|:   ..:....|.|:    :...::|....::|.|.
Mouse   739 -VPNKQHGQIRGYQVTYVRLENGEPRGQPIIQDVMLAEAQWRPE----ESEDYETTISGLTPETT 798

  Fly   517 YTVTVSAITRHKKNGEPATGSCLMPVSTPDAIGR-TMWSKVNLDSKYVLKLYLPKISERNGPICC 580
            |::||:|.|   ..|:.|.....:..:|....|| ||..........:|:.:.||  |..|.:..
Mouse   799 YSITVAAYT---TKGDGARSKPKVVTTTGAVPGRPTMMVSTTAMHTALLQWHPPK--ELPGELLG 858

  Fly   581 YRL--------------------------------YLVRINNDN---------KELPDPEKL--- 601
            |||                                |:.|:...|         ||:..||.:   
Mouse   859 YRLQYRRADEARPNTIDFGKDDQHFTVTGLHKGATYVFRLAAKNRAGPGEEFEKEITTPEDVPSG 923

  Fly   602 -----------------------------NIATYQEVHSD--------NVT-------------- 615
                                         :|..|..|:.|        |||              
Mouse   924 FPQNLRVTGLTTSTTELTWDPPVLAERNGHITNYTVVYRDINSQLELQNVTNDTHLTLLGLKPDT 988

  Fly   616 ---------------------RSSAYIAEMISSKYFR---------------PEIF--------- 635
                                 :|.....|.:.:|.||               |:.:         
Mouse   989 TYDIKVRAHTSKGAGPLSPSIQSRTMPVEQVFAKNFRVAAAMKTSVLLSWEVPDSYKSAVPFKIL 1053

  Fly   636 ----------------LGDEKRFSENNDIIRDN-----------------DEICRKCLEGTPF-- 665
                            :.|.:..:|.:.::.:.                 |.:.:|.|..:.|  
Mouse  1054 YNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNRGSSAGGLQHLVSIRTAPDLLPQKPLPASAFIE 1118

  Fly   666 -----LRKPE-----------IIHIPPQ---GSLS----NSDSELPILSEKDNLIKGANLTEHAL 707
                 |..|:           |:.:|..   |:|.    |:..||    |.|.|::.....|   
Mouse  1119 DGRFSLSMPQVQDPSLVRWFYIVVVPIDRVGGNLLAPRWNTPEEL----ELDELLEAIEQGE--- 1176

  Fly   708 KILESKLRDKRNAVTSDENPILSAVNPNVP----LHD--SSRDVFDGEIDINSNYTGF-LEIIVR 765
               |.:.|.:|.|  ....|.::|....:|    |.|  |.|..::..:..:.:|..| |..:..
Mouse  1177 ---EKQRRRRRQA--ERLKPYVAAQVDVLPDTFTLGDKKSYRGFYNRPLSPDLSYQCFVLASLKE 1236

  Fly   766 DRNNALMAYSKYFDII----TPATEAEPIQSLNNMDYYLSIGVKAGAVLLGVILVFIVLWVFHHK 826
            ..:....|.|.|.|.|    |||.:.|..:.|......|       ||:| :||:.|.:.:|..|
Mouse  1237 PMDQKRYASSPYSDEIVVQVTPAQQQEEPEMLWVTGPVL-------AVIL-IILIVIAILLFKRK 1293

  Fly   827 KTKN-ELQGEDTLTLRDSLSRALFGRRNHNHSHFITSGNHKGF--------DAGPIHRLDLENAY 882
            :|.: ..:.|.::.|:|||.............::.|.|:....        |..||...||.:..
Mouse  1294 RTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQTPGSSAPSCPNISSMRDHPPIPITDLADNI 1358

  Fly   883 KNRHKDTDYGFLREYEML-PNRFSDRTTKNSDLKENACKNRYPDIKAYDQTRVKLAVINGLQTTD 946
            :....:....|.:|||.: |.:  ..|.:||:.:.|..||||.::.|||.:||.|..|:|:..:|
Mouse  1359 ERLKANDGLKFSQEYESIDPGQ--QFTWENSNSEVNKPKNRYANVIAYDHSRVLLTSIDGVPGSD 1421

  Fly   947 YINANFVIGYKERKKFICAQGPMESTIDDFWRMIWEQHLEIIVMLTNLEEYNKAKCAKYWPEKVF 1011
            |||||::.||:::..:|..|||:..|:.|||||:|||....:||:|.|||.::.||.:|||  |.
Mouse  1422 YINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWP--VR 1484

  Fly  1012 DTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEEDRRQITQYHYLTWKDFMAPEHPHGII 1076
            .|:.:|.|.|......:...|..||..:.|:.::     ::|::.|:.::.|.|...||:|..|:
Mouse  1485 GTETYGLIQVTLVDTVELATYTMRTFALHKSGSS-----EKRELRQFQFMAWPDHGVPEYPTPIL 1544

  Fly  1077 KFIRQINSVYSLQRGPILVHCSAGVGRTGTLVALDSLIQQLEEEDSVSIYNTVCDLRHQRNFLVQ 1141
            .|:|::.:...|..||::|||||||||||..:.:|:::::::.|.:|.||..|..:|.|||::||
Mouse  1545 AFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQ 1609

  Fly  1142 SLKQYIFLYRALLDTGTFGNTDICIDTMASAIESLKR-KPNEGKCKLEVEFEKLLATADEISKSC 1205
            :..||:|::.|||:....|:|::....:.:.|:.|.: .|.|....:|:|| ||||.: :...|.
Mouse  1610 TEDQYVFIHEALLEAAMCGHTEVLARNLYAHIQKLGQVPPGESVTAMELEF-KLLANS-KAHTSR 1672

  Fly  1206 SVGENEE-NNMKNRSQEIIPYDRNRVILTPLPMRENSTYINASFIEGYDNSETFIIAQDPLENTI 1269
            .|..|.. |..|||...|:||:..||.|.|:...|.|.||||||::||...:.:|..|.||..:.
Mouse  1673 FVSANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAEST 1737

  Fly  1270 GDFWRMISEQSVTTLVMISEIGD-GPRKCPRYW-ADDEVQYDHILVKYVHSESCPYYTRREFYVT 1332
            .|||||:.|.:.|.:||::::.: |..||.:|| |:...:|.:.:|..:...:.|.|..|||.||
Mouse  1738 EDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT 1802

  Fly  1333 NCKIDDTLKVTQFQYNGWPTVDGEVPEVCRGIIELVDQAYNHYKNNKNSGCRSPLTVHCSLGTDR 1397
            :.:...:..:.|||:..||  :..||:...|.|:.:.|.   :|..:..|...|:|||||.|..|
Mouse  1803 DARDGQSRTIRQFQFTDWP--EQGVPKTGEGFIDFIGQV---HKTKEQFGQDGPITVHCSAGVGR 1862

  Fly  1398 SSIFVAMCILVQHLRLEKCVDICATTRKLRSQRTGLINSYAQYEFLHRAIINY 1450
            :.:|:.:.|:::.:|.|..||:..|.:.||:||..::.:..||:..:||.:.|
Mouse  1863 TGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEY 1915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653 21/109 (19%)
Ig 150..221 CDD:143165 18/85 (21%)
fn3 237..321 CDD:278470 22/100 (22%)
FN3 339..432 CDD:238020 28/99 (28%)
FN3 439..535 CDD:238020 22/109 (20%)
PTPc 892..1155 CDD:214550 103/263 (39%)
PTPc 920..1155 CDD:238006 94/234 (40%)
PHA02694 <1121..1206 CDD:177476 30/85 (35%)
PTPc 1186..1449 CDD:214550 94/265 (35%)
PTPc 1216..1449 CDD:238006 83/234 (35%)
PtprfXP_006502927.1 I-set 33..124 CDD:369462
Ig2_RPTP_IIa_LAR_like 152..232 CDD:319301 1/1 (100%)
Ig3_RPTP_IIa_LAR_like 252..320 CDD:143216 21/92 (23%)
FN3 325..414 CDD:238020 8/88 (9%)
FN3 421..513 CDD:238020 22/104 (21%)
FN3 518..607 CDD:238020 22/94 (23%)
FN3 615..709 CDD:238020 32/115 (28%)
FN3 716..822 CDD:238020 23/117 (20%)
FN3 827..916 CDD:238020 17/90 (19%)
FN3 925..1013 CDD:238020 8/87 (9%)
FN3 1022..>1081 CDD:238020 6/58 (10%)
PTP_DSP_cys 1352..1627 CDD:391942 106/283 (37%)
R-PTP-F-2 1629..1919 CDD:350477 100/294 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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