DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp69D and ptp-4

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:NP_001255470.1 Gene:ptp-4 / 177898 WormBaseID:WBGene00010558 Length:1159 Species:Caenorhabditis elegans


Alignment Length:1390 Identity:306/1390 - (22%)
Similarity:522/1390 - (37%) Gaps:378/1390 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 TPDRIKRKIK--QDVMLYCLIEMYPQNETTNRNLKWLKDGSQFEFLDTFSSISKLNDTHLNFTLE 200
            || |:.|::.  ||   ..|:..|.|:...:.:.:|.....:::.:..|            :||.
 Worm    53 TP-RLVRRLDWFQD---DSLVASYQQDILADSSRQWWVSDGRYQLIRPF------------YTLR 101

  Fly   201 FTEVYKKENGTYKCTVFDD----TGLEITSKEITLFVMEVPQVSIDFAKAVGANKIYLNWTVN-- 259
            .:.|..:::|||:|.:..|    :.....::|:.:.|..|...|.:. |......|.|.||.|  
 Worm   102 VSPVTPEDSGTYRCRLETDPLFSSPQSTATQELAVMVKPVAPSSPEI-KTFTNRSITLVWTHNAA 165

  Fly   260 DGNDPIQKFFITLQEAGTPTFTYHKDFI---NGSHTSYILDHFKPNTTYFLRIVGKNSIGN---G 318
            ..:.||.:|.::::     |.:.:..|:   ..:.|:.|:|:..|.|.|...:..:||.|:   |
 Worm   166 RAHRPILRFSVSVR-----TVSDNTRFVMAAPSNATTVIVDNLSPYTLYAFSVRAENSAGSSDFG 225

  Fly   319 QPTQYPQGITTLSYDPIFIPKVE-----TTGSTASTITIGWNPPPPDLIDYIQYYELIVSESGEV 378
            ..|.:    .||...|...|:::     |:.....|||      |||            ..:||:
 Worm   226 PETTF----RTLGESPNRPPQIQKIRNITSECVEVTIT------PPD------------EMNGEL 268

  Fly   379 PK--VIEEAIYQQNSRNLPYMFDK----------LKTATDYEFRVRACSDL-----------TKT 420
            .|  |:.:|:.:...|.:  .|||          |..:|||...:.|.:..           |:.
 Worm   269 DKYLVLIQAVNETIPRKM--TFDKPTSTPLTICALSPSTDYALAIEADNGFGTSPQATLVFHTED 331

  Fly   421 CGP-WSENVNGTTMDGVATKPTNLSIQCHHDNVTRGNSIAINWDVPK-TPNGKVVSYLIHLLGNP 483
            ..| ||.:.. ||:. |..||                .|.:.|..|. ....||:.|  ||.   
 Worm   332 SVPNWSPSTI-TTLP-VVGKP----------------EITVLWPAPPLNATEKVIKY--HLY--- 373

  Fly   484 MSTVDREMWGPKIRRID-EPH------HKTLYESVSPNTNYTVTVSAITRHKKNGEPATGSCLMP 541
            ....:.:.|  ||..:: .|:      .|.....::|||.|.:.|||.|...:..:.|.......
 Worm   374 YKAKNEDQW--KIEHLNVSPNGVKSKLFKYRLVDLNPNTQYRIRVSASTIKGEGAQSADSVAQTD 436

  Fly   542 VSTPDAIGRTMWSKVNLDSKYVLKL---YLPKISERNGPICCYRLYLVRINNDNKELPDPEKLNI 603
            |..|   |...:..:|.|.|..:||   |.|.::.:..|     .:.|::.|.            
 Worm   437 VGEP---GTVTFKDLNFDCKNGVKLRWNYEPSVNSKKSP-----TFTVKVTNQ------------ 481

  Fly   604 ATYQEVHSDNVTRSSAYIAEMISSKYFRPEIFLGDEKRFSENNDIIRDNDEICRKCLEGTPFLRK 668
                       |.|..:...|:|.                   |||                   
 Worm   482 -----------TTSLQFNTTMLSL-------------------DII------------------- 497

  Fly   669 PEIIHIPPQGSLSNSDSELPILSEKDNLIKGANLTEHALKILESKLRDKRNAVTSDENPILSAVN 733
                      .||..|                   |:.|:|:                 :|    
 Worm   498 ----------DLSLYD-------------------EYTLRII-----------------VL---- 512

  Fly   734 PNVPLHDSSRDVFDGEIDINSNYTGFLEIIVRDRNNALMAYSKYFDIITPATEAEPIQSLNNMDY 798
                    .|...|....:...|:...:.|::|:    .:|...|  .:|..:...:.|......
 Worm   513 --------ERSTIDNSTILIGKYSDSHQFILKDK----CSYQSSF--CSPGEKCAKLTSSAGNPR 563

  Fly   799 YLSIGVKAGAVLLGVILVFIVLWVFHHKKTKNELQGEDTLTLRDSLSRALFGRRNHNHSH----- 858
            |:|:.:    |:..:|:...:.:|..|                       |.|.:.|..|     
 Worm   564 YISVLI----VIFAIIIFAFICFVIVH-----------------------FARGSMNFKHLLKKK 601

  Fly   859 ----FITSGNHKGFDAGPIHRLDLENAY---KNRHKDTDYGFLREYEMLPNRFS-----DRTTKN 911
                ::...:...:|:.....:.:|..|   ::.:::....|..::::|.::.|     |....|
 Worm   602 EKCVYLEEISPLVYDSAGQEDIPVELFYGYVEDLNRNDSLKFKTQFQILESQTSGIDSVDSGESN 666

  Fly   912 SDLKENACKNRYPDIKAYDQTRVKLAVINGLQTTDYINANFVIGYKERKKFICAQGPMESTIDDF 976
            |...||:.||||.:|.|.:.||::|   |.....||||||:|....||..:|..|.|:.||..||
 Worm   667 SSSDENSQKNRYNNIGAIEATRIRL---NSPTGNDYINANYVDSCNERNAYIATQAPLPSTFSDF 728

  Fly   977 WRMIWEQHLEIIVMLTNLEEYNKAKCAKYWPEKVFDTKQFGDILVKFAQERKTGDYIERTLNVSK 1041
            |.|||::...|||.:||:.|..|.||.:|||.:....:.||:..|....|.....:..|.|::..
 Worm   729 WSMIWQERSNIIVCITNMVEDGKRKCDQYWPSQQDSPQTFGNYQVTLVSESTNAHFSHRILDLKI 793

  Fly  1042 NKANVGEEEDRRQITQYHYLTWKDFMAPEHPHGIIKFIRQINSVYSLQRGPILVHCSAGVGRTGT 1106
            .||....|   |::.|.|::.|.|...|.....::.|:...:.::|  .||::|||||||||:|:
 Worm   794 AKAVPAVE---RKVHQLHFMGWPDHGVPSSVFPLLSFVHYTSDIHS--TGPVVVHCSAGVGRSGS 853

  Fly  1107 LVALDSLIQQLEEEDSVSIYNTVCDLRHQRNFLVQSLKQYIFLYRALLDTGTFGNTDICIDTMAS 1171
            .:.:||:.:.|.....:::...:..:|.||..|||:|:||||.:.|:......|.|.:..|....
 Worm   854 YILVDSMRRHLISFRRLNVQGHLTHMRRQRAKLVQTLEQYIFCHEAIRQLIRHGITRVHSDLFMR 918

  Fly  1172 AIESLKRKPNEGKCKLEVEFEKLLATADEISKSCSVGENEENNMKNRSQEIIPYDRNRVILTPLP 1236
            .:..|..:...||.:::::||.:          |        :.|::.:.:|..|   ||..|  
 Worm   919 YLHYLSEENLNGKTRMQLQFEDI----------C--------DCKHQPRCLIESD---VITLP-- 960

  Fly  1237 MRENSTYINASFIEGYDNSETFIIAQDPLENTIGDFWRMISEQSVTTLVMISEIGDGPRKCPRYW 1301
                          ||..|:.|::..  ..|...|.||:..:|.|.|:|::::.....||.|...
 Worm   961 --------------GYHRSDEFMVGS--WGNECEDLWRLTWQQKVQTIVILNQRDSFWRKLPSCI 1009

  Fly  1302 ADDEVQYDH----ILVKYVHSESCPYYTRREFYVTNCKIDDTLKVTQFQYNGWPTVDGEVPEVCR 1362
            .|.|:|..|    :|::....:.|.    |...|:...:|     |.|    |    .|:..|.:
 Worm  1010 YDGEIQLQHGDNFVLLQKDDQQLCV----RIVNVSRADLD-----TDF----W----REIENVQK 1057

  Fly  1363 GIIELVDQAY----NHYKNNKNSGCRSPLTVHCS-LGTDRSSIFVAMC---ILVQHLRLEKCVDI 1419
            ..|...|...    :.|..:..|...|..|:..| |..|.:::..::|   .|...|....|||:
 Worm  1058 QRITYHDAPLLILAHKYPPSVPSPTDSTSTLSLSILFNDDTALAFSICAATTLACQLETTGCVDV 1122

  Fly  1420 CATTRKLRSQRTGLINSYAQYEFLH 1444
            ..........:.|:..|..:.|.::
 Worm  1123 VQVLSSYTEIQCGIFASKQEIEIIY 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653 19/99 (19%)
Ig 150..221 CDD:143165 13/74 (18%)
fn3 237..321 CDD:278470 22/91 (24%)
FN3 339..432 CDD:238020 25/121 (21%)
FN3 439..535 CDD:238020 23/103 (22%)
PTPc 892..1155 CDD:214550 94/267 (35%)
PTPc 920..1155 CDD:238006 86/234 (37%)
PHA02694 <1121..1206 CDD:177476 20/84 (24%)
PTPc 1186..1449 CDD:214550 56/271 (21%)
PTPc 1216..1449 CDD:238006 53/241 (22%)
ptp-4NP_001255470.1 IG_like <83..120 CDD:214653 9/48 (19%)
FN3 140..232 CDD:238020 24/101 (24%)
FN3 237..326 CDD:238020 23/108 (21%)
FN3 338..435 CDD:238020 27/121 (22%)
PTPc 642..900 CDD:214550 93/265 (35%)
PTPc 675..900 CDD:238006 85/232 (37%)
Y_phosphatase <977..1128 CDD:278528 39/167 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D98364at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.