DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp69D and si:ch1073-391i24.1

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_021322118.1 Gene:si:ch1073-391i24.1 / 101886250 ZFINID:ZDB-GENE-110408-69 Length:315 Species:Danio rerio


Alignment Length:350 Identity:94/350 - (26%)
Similarity:162/350 - (46%) Gaps:53/350 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1113 LIQQLEEEDSVSIYNTVCDLRHQRNFLVQSLKQYIFLYRALLDTGTFGNTDICIDTMASAIESLK 1177
            ::...|.|..|.|||.|.:||.:|..:||:.:||:|::.|:|:....|:|.|..:.:.|....:.
Zfish     1 MLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACLCGDTTIPANQLRSVYYDMN 65

  Fly  1178 R-KPNEGKCKLEVEFEKL-LATADEISKSCSVGENEENNMKNRSQEIIPYDRNRVILTPLPMREN 1240
            | .|......::.||..| :.|.....:.||:.....|:.|||..:::|.||....|..:. .|:
Zfish    66 RLDPQTNSSPIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDVLPPDRCLPFLITID-GES 129

  Fly  1241 STYINASFIEGYDNSETFIIAQDPLENTIGDFWRMISEQSVTTLVMISEIGDGPRKCPRYWADDE 1305
            |.||||:.::.|.....||:.|.||.||:.||||::.:...|::||:::: |..:..|:      
Zfish   130 SNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSIVMLNDV-DPAQMQPQ------ 187

  Fly  1306 VQYDHILVKYVHSESCPYYTRREFYVTNCKIDDTLKVTQFQYNGWPTVDGEVPEVCRGIIELVDQ 1370
                                           |....|.|||:.||| :..:.|...|..::|:.|
Zfish   188 -------------------------------DGYRMVQQFQFLGWP-MYRDTPVSKRSFLKLIHQ 220

  Fly  1371 AYNHYKNNKNSGCRSPLTVHCSLGTDRSSIFVAMCILVQHLRLEKCVDICATTRKLRSQRTGLIN 1435
            . :.::...:.| .....|||..|..||..|.|:.|:.:.||.::.||:....:.||:.:..:::
Zfish   221 V-DKWQEEYDGG-EGRTVVHCLNGGGRSGTFCAISIVSEMLRHQRSVDVFHAVKTLRNNKPNMVD 283

  Fly  1436 SYAQYEFLHRAIINYSDLH-HIAES 1459
            .     .:|.|:.|   .| |:..|
Zfish   284 L-----LVHTALAN---THTHVTHS 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653
Ig 150..221 CDD:143165
fn3 237..321 CDD:278470
FN3 339..432 CDD:238020
FN3 439..535 CDD:238020
PTPc 892..1155 CDD:214550 16/41 (39%)
PTPc 920..1155 CDD:238006 16/41 (39%)
PHA02694 <1121..1206 CDD:177476 25/86 (29%)
PTPc 1186..1449 CDD:214550 67/263 (25%)
PTPc 1216..1449 CDD:238006 60/232 (26%)
si:ch1073-391i24.1XP_021322118.1 Y_phosphatase <1..43 CDD:332578 16/41 (39%)
PTPc 76..292 CDD:214550 67/262 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.