DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp69D and ptprea

DIOPT Version :9

Sequence 1:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster
Sequence 2:XP_021336091.1 Gene:ptprea / 100499203 ZFINID:ZDB-GENE-100714-1 Length:711 Species:Danio rerio


Alignment Length:587 Identity:215/587 - (36%)
Similarity:339/587 - (57%) Gaps:18/587 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   872 PIHRLDLENAYKNRHKDTDYGFLREYEMLPNRFSDRTTKNSDLKENACKNRYPDIKAYDQTRVKL 936
            ||...:||..|:.|..|....|..||..||......|.:.::.:||..|||||:|..|||:||.|
Zfish   130 PIPVDNLEEEYRIRSADDGKLFREEYSSLPGGSIQGTCEEANKEENKEKNRYPNILPYDQSRVIL 194

  Fly   937 AVINGLQTTDYINANFVIGYKERKKFICAQGPMESTIDDFWRMIWEQHLEIIVMLTNLEEYNKAK 1001
            ..::|:..:|||||:::.|||::.|||.||||.:.|..|||||||||....|||||||:|..:.|
Zfish   195 TPMDGVTCSDYINASYIDGYKDKNKFIAAQGPKQDTTADFWRMIWEQKSSTIVMLTNLKERKEDK 259

  Fly  1002 CAKYWPEKVFDTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEEDRRQITQYHYLTWKDF 1066
            |.:|||::...|  :|::.|.........||..|...| :.:|:.|.:.. |.:||.|:.:|.||
Zfish   260 CYQYWPDQGCWT--YGNVRVAVEDFTVLVDYTIRKFCV-QYQASDGSKSP-RLVTQLHFTSWPDF 320

  Fly  1067 MAPEHPHGIIKFIRQINSVYSLQRGPILVHCSAGVGRTGTLVALDSLIQQLEEEDSVSIYNTVCD 1131
            ..|..|.|::||::::..|.....|||:||||||||||||.:.:|::|..:..|..|.::..|..
Zfish   321 GVPFSPIGMLKFLKKVKQVNPSYAGPIVVHCSAGVGRTGTFIVIDAMIDMMHTEQKVDVFGFVSR 385

  Fly  1132 LRHQRNFLVQSLKQYIFLYRALLDTGTFGNTDICIDTMASAIESL--KRKPNEGKCKLEVEFEKL 1194
            :|.||:.|:|:..||.|:|:|||:...:|:|::.:.::...::.|  ...|.: :..||.||:||
Zfish   386 IREQRSQLIQTDLQYSFVYQALLEYFLYGDTELDVSSLEGHLQKLHNTNAPLD-RVGLEEEFKKL 449

  Fly  1195 LATADEISK-SCSVGENEENNMKNRSQEIIPYDRNRVILTPLPMRENSTYINASFIEGYDNSETF 1258
              |...|.| :...|....|..|||..:|||||.|||||:....:|.:.|:|||||:||...:.:
Zfish   450 --TNMRIMKENMRTGNLPANMKKNRVLQIIPYDFNRVILSMKRGQEFTDYVNASFIDGYRQKDYY 512

  Fly  1259 IIAQDPLENTIGDFWRMISEQSVTTLVMISEIGDGPR-KCPRYW-ADDEVQYDHILVKYVHSESC 1321
            |..|.||.:|:.|||||..|....::||::|:.:..: ||.:|| ::|.|.|....|:......|
Zfish   513 IATQGPLVHTVDDFWRMAWEWKCHSIVMLTELQERDQDKCFQYWPSEDSVTYGEFSVEIKGDTLC 577

  Fly  1322 PYYTRREFYVTNCKIDDTLKVTQFQYNGWPTVDGEVPEVCRGIIELVDQAYNHYKNNKNSGCRSP 1386
            ..::.|:..:|:.....|..|..|.::|||.:.  :|...:|:|:::...   .|..:.|| ..|
Zfish   578 ETFSLRDLVLTHTPEKQTRLVRHFHFHGWPEIG--IPAEGKGMIDIIAAV---QKQQQQSG-NHP 636

  Fly  1387 LTVHCSLGTDRSSIFVAMCILVQHLRLEKCVDICATTRKLRSQRTGLINSYAQYEFLHRAIINYS 1451
            :.||||.|..|:..|:|:..:::.::.|..:|:..|.:.||.||..::.:..||:|.:|.:.::.
Zfish   637 IIVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQTVKSLRMQRPHMVQTVEQYDFCYRVVQDFV 701

  Fly  1452 DL 1453
            |:
Zfish   702 DI 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653
Ig 150..221 CDD:143165
fn3 237..321 CDD:278470
FN3 339..432 CDD:238020
FN3 439..535 CDD:238020
PTPc 892..1155 CDD:214550 112/262 (43%)
PTPc 920..1155 CDD:238006 104/234 (44%)
PHA02694 <1121..1206 CDD:177476 27/87 (31%)
PTPc 1186..1449 CDD:214550 90/265 (34%)
PTPc 1216..1449 CDD:238006 79/234 (34%)
ptpreaXP_021336091.1 PTPc 180..409 CDD:238006 102/232 (44%)
PTPc 441..699 CDD:214550 90/265 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.770

Return to query results.
Submit another query.