DRSC/TRiP Functional Genomics Resources

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Protein Alignment mirr and MATALPHA2

DIOPT Version :10

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_009868.3 Gene:MATALPHA2 / 850406 SGDID:S000000635 Length:210 Species:Saccharomyces cerevisiae


Alignment Length:87 Identity:27/87 - (31%)
Similarity:40/87 - (45%) Gaps:12/87 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 GYPFNSYGMDLNGARRK-----NATRETTSTLKAWLNEHKKNPY-PTKG-EKIMLAIITKMTLTQ 270
            |..||....|:.....|     ..|:|....|::|..::.:||| .||| |.:|..  |.::..|
Yeast   113 GLVFNVVTQDMINKSTKPYRGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKN--TSLSRIQ 175

  Fly   271 VSTWFANARRRLKKENKMTWEP 292
            :..|.:|.||   ||..:|..|
Yeast   176 IKNWVSNRRR---KEKTITIAP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 243..281 CDD:428673 13/39 (33%)
MATALPHA2NP_009868.3 HOX 135..188 CDD:197696 19/57 (33%)

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