DRSC/TRiP Functional Genomics Resources

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Protein Alignment mirr and BLH4

DIOPT Version :10

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001324137.1 Gene:BLH4 / 816908 AraportID:AT2G23760 Length:679 Species:Arabidopsis thaliana


Alignment Length:205 Identity:44/205 - (21%)
Similarity:69/205 - (33%) Gaps:58/205 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 FNSYGMDLNGARR--KNATRETTSTLKAWLNEHKKNP---------------------------- 250
            |:..||....|.|  :.....:.:.|:|||.||..||                            
plant   414 FHHMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLNPFSRPCKEKVCTFSCIYLIVFFLSIYIQK 478

  Fly   251 ------------------------YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK---ENKM 288
                                    ||:..:|.:||..|.::..|||.||.|||.||.|   |...
plant   479 KRKEKNYWFRVLKIVKSFSGLFLRYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMY 543

  Fly   289 TWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGSTDDKDRSGRLGDMMTDRPGESNNSEWS 353
            ..|.:.|.:.::.|.:....:..:..:..|.|.:. ...:....:.:....||....|:::|..|
plant   544 QQEAKEREEAEEENENQQQQRRQQQTNNNDTKPNN-NENNFTVITAQTPTTMTSTHHENDSSFLS 607

  Fly   354 ESRPGSPNGS 363
            .....|..||
plant   608 SVAAASHGGS 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 243..281 CDD:428673 19/89 (21%)
BLH4NP_001324137.1 POX 233..370 CDD:214728
Homeobox_KN <503..533 CDD:428673 14/29 (48%)
Blue background indicates that the domain is not in the aligned region.

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