DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mirr and IRX3

DIOPT Version :9

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_005256196.1 Gene:IRX3 / 79191 HGNCID:14360 Length:529 Species:Homo sapiens


Alignment Length:594 Identity:184/594 - (30%)
Similarity:229/594 - (38%) Gaps:226/594 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PGARSTSPCGPSAGLPALSLVGAPPPGPHSSAPGGAPAPGAG----NPPNRCCDTGRTIYTDPVS 132
            |||...|  |.|||                 |.||.   |||    |......:...::|..|  
Human    20 PGAAGGS--GGSAG-----------------ARGGL---GAGASELNASGSLSNVLSSVYGAP-- 60

  Fly   133 GQTICSCQYDMLNYQRLAAAGGVPLGVYPEGMSAYLSGIAADQPPFYANPAGIDLKEN------L 191
                         |...|||...      :|..|:|. .||:.|.|....|..:||::      .
Human    61 -------------YAAAAAAAAA------QGYGAFLP-YAAELPIFPQLGAQYELKDSPGVQHPA 105

  Fly   192 VAGASPWPYPSMYHPYDAAFAGYPFNSYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGE 256
            .|.|.|.|:|:.| ||.....|.|          :|.||||||:|||||||||||:|||||||||
Human   106 AAAAFPHPHPAFY-PYGQYQFGDP----------SRPKNATRESTSTLKAWLNEHRKNPYPTKGE 159

  Fly   257 KIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAK- 320
            ||||||||||||||||||||||||||||||||||.||:|.|::......:.::..|:.|..|.| 
Human   160 KIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGKR 224

  Fly   321 ---------------DSGVGSTDDKD----------------------RSGRLGDMMTDRPGESN 348
                           ..|.|..||.:                      .:.|.||:......:|.
Human   225 ELELEEEELGGEEEDTGGEGLADDDEDEEIDLENLDGAATEPELSLAGAARRDGDLGLGPISDSK 289

  Fly   349 NSEWSESRPGSPNGSPDLYDRP------GSMPPGAHPLFHPAALHHHFRPPAGSPP---DIAAYH 404
            ||:..:|..|       |.|||      ...||       |.|:   ..|...|||   |..|  
Human   290 NSDSEDSSEG-------LEDRPLPVLSLAPAPP-------PVAV---ASPSLPSPPVSLDPCA-- 335

  Fly   405 HHQQQLLQQHQQAQQNSLQTAVGGTAKPRIWSLADMASKDSKDSSSGAKDNHPELPPAHPGFYGH 469
                     ...|..::||       ||:|||||:.|:         :.|| |...|  ||..|.
Human   336 ---------PAPAPASALQ-------KPKIWSLAETAT---------SPDN-PRRSP--PGAGGS 372

  Fly   470 PGQQPSPGKILSPLAARIPNYSPYVRPDLYRGFYGPAAAHLGAPTQEFLEHQRTFGASLAAH--- 531
            |     ||..::|.|.::                .|||                  |:.|||   
Human   373 P-----PGAAVAPSALQL----------------SPAA------------------AAAAAHRLV 398

  Fly   532 NGPLGMNPLLWKAAVSGAANGHHFAPLSLTTSGGSSGGQQVAPPPVASPSASSSSSSMGCDVVHI 596
            :.|||..|........|...|....||||..|         |||                .::.:
Human   399 SAPLGKFPAWTNRPFPGPPPGPRLHPLSLLGS---------APP----------------HLLGL 438

  Fly   597 PTSSGQSAA 605
            |.::|..||
Human   439 PGAAGHPAA 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 37/38 (97%)
IRX3XP_005256196.1 Homeobox_KN 145..184 CDD:283551 37/38 (97%)
IRO 344..359 CDD:214716 10/30 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 0.375 Domainoid score I8071
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
77.000

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