Protein Alignment mirr and Meis1

DIOPT Version :9

• Sequence 1: NP_001261778.1
• Gene: mirr / 39441
• FlyBaseID: FBgn0014343
• Length: 682
• Species: Drosophila melanogaster
• Sequence 2: XP_006251591.1
• Gene: Meis1 / 686117
• RGDID: 1585482
• Length: 465
• Species: Rattus norvegicus
• Alignment Length: 556
• Identity: 110/556 - (19%)
• Similarity: 158/556 - (28%)
• Gaps: 244/556 - (43%)

  Fly    60 PGHSGM----VTSTV---PPGARSTSPCGPSAGLPALSLVGAPPPGPHS---SAPGGAPAPGAGN 114
            |.:.||    :.||:   |..|||..        |...|...||...|.   :|...|.||..|:
  Rat     9 PHYGGMDGVGIPSTMYGDPHAARSMQ--------PVHHLNHGPPLHSHQYPHTAHTNAMAPSMGS 65

  Fly   115 PPNRCCDTGR-TIYTDP-----------------------VSGQTICSCQYDMLNYQRLAAAGGV 155
            ..|......: .||..|                       |:|..:||.:
  Rat    66 SVNDALKRDKDAIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSE--------------- 115

  Fly   156 PLGVYPEGMSAYLSGIAADQPPFYANP-------------------------------------- 182
               .:.|.::.:...|.|::|.|.:||
  Rat   116 ---SFNEDIAVFAKQIRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCL 177

  Fly   183 ---AGIDL------------KENLVAGASPWPYPSMYHPYD----AAFAGYPFNSYG-------- 220
               ..|||            .|::...|:....||....:|    ....|.|..|.|
  Rat   178 KGKMPIDLVIDDREGGSKSDSEDVTRAANLTDQPSWNRDHDDTASTRSGGTPGPSSGGHTSHSGD 242

  Fly   221 -----------------------MDLNGARRKNA---TRETTSTLKAWLNEHKKNPYPTKGEKIM 259
                                   .|.:..|.|..   .:..|:.::|||.:|..:|||::.:|..
  Rat   243 NSSEQGDGLDNSVASPSTGDDDDPDKDKKRHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQ 307

  Fly   260 LAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGV 324
            ||..|.:|:.||:.||.|||||:.:.         .:|..:..:......|.      |.:..|.
  Rat   308 LAQDTGLTILQVNNWFINARRRIVQP---------MIDQSNRAVSQGTPYNP------DGQPMGG 357

  Fly   325 GSTDDKDRSGRLGDMMTDRPGESNNSEWSESRP-GSPNGSPDLYDRPGSMPPGAHPLFHPAALHH 388
            ...|.:...|.....:...|||    ..:...| |...|.|. |.: ..|||      |||.|.|
  Rat   358 FVMDGQQHMGIRAPGLQSMPGE----YVARGGPMGVSMGQPS-YTQ-AQMPP------HPAQLRH 410

  Fly   389 HFRPPAGSPPDIAAYHHHQQQLLQQHQQAQQNSLQTAVGGTAKPRIWSLADMASKDSKDSSSGAK 453
                   .||                       :.|.:.|
  Rat   411 -------GPP-----------------------MHTYIPG------------------------- 420

  Fly   454 DNHPELPPAHPGFYGHPGQQPSPGKILSPLAARIPN 489
              ||.    ||....| |.||.||   .|::|..|:
  Rat   421 --HPH----HPAVMMH-GGQPHPG---MPMSASSPS 446

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mirr	NP_001261778.1	Homeobox_KN	242..281	CDD:283551	18/38 (47%)
Meis1	XP_006251591.1	Meis_PKNOX_N	108..192	CDD:406806	13/101 (13%)
		Homeobox_KN	290..329	CDD:399131	18/38 (47%)
		PABP-1234	<326..449	CDD:130689	43/213 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0773
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900