DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mirr and Irx6

DIOPT Version :9

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_071873.2 Gene:Irx6 / 64379 MGIID:1927642 Length:439 Species:Mus musculus


Alignment Length:503 Identity:157/503 - (31%)
Similarity:209/503 - (41%) Gaps:136/503 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 SPCGPSAGLPALSLVGAPPPGPHSSAPGGAPAPGAGNPPNRCCDTGRTIYTD----PVSGQTICS 138
            ||.|...|..:..||.|     .|||              .||:|.....:|    ..|..|:|.
Mouse     4 SPFGHPYGSTSQFLVSA-----SSSA--------------TCCETAPRPVSDVASASTSASTLCC 49

  Fly   139 CQYDMLNYQRLAAAG----GVPLGVY------PEGMSAYLSGIAADQPPFYA---NPAGIDLKEN 190
            ..||    .||..:.    |..||:|      .:....||:  ...:||...   ||. .:.|:.
Mouse    50 TPYD----SRLLGSARPELGAALGIYGAPYAAAQSYPGYLT--YGPEPPTLCGALNPQ-YEFKDA 107

  Fly   191 LVAGASPWPYPSMYHPYDAAFAGYPFNSY-GMDLNGA-RRKNATRETTSTLKAWLNEHKKNPYPT 253
            ..:.|.....|..|:||:.....|.::.| |::|:.| ||||||||:||.|||||:||:||||||
Mouse   108 AGSFAPSLTQPGAYYPYETTLGQYQYDRYGGVELSSAGRRKNATRESTSALKAWLHEHRKNPYPT 172

  Fly   254 KGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLD 318
            |||||||||||||||||||||||||||||||||||||.|:|:..::......:|.....:.|..|
Mouse   173 KGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKADSGEDSLGCLNGDTKD 237

  Fly   319 AKDSGVGSTDDKDRSGRLGDMMTDRPGESNNSEWSESRPGSPNGSPDLYDRPGSMPPGAHPLFHP 383
            |      :...:.|..||.|:       .:..|..|........:.....|.........||..|
Mouse   238 A------TASQEARGLRLSDL-------EDLEEEEEEEEAEEEAAVSAARRLADFQKSTQPLPAP 289

  Fly   384 AALHHHFRPPAGSPPDIAAYHHHQQQLLQQH---------------QQAQQNSLQTAVGGTA--- 430
            .|               ||    |::.|:..               |..:.:.:....||..   
Mouse   290 CA---------------AA----QERCLESRECGLGLPRFSFTEAPQSGEADFITAEPGGPTMIL 335

  Fly   431 ------KPRIWSLADMASKDSKDSSSGAKDNHPELPP--AHPGFYGHPGQQPSPGKILSPL---- 483
                  ||||||||..|:..:.:|:       |..||  ..|..:..|.|..|..::|.|.    
Mouse   336 HYPSGHKPRIWSLAHTAAASAVESA-------PSTPPRAQSPECHMIPRQPSSIRRLLVPRDSEG 393

  Fly   484 -----AAR-----------IP-NYSPYVR---PDLYRGFYGPAAAHLG 511
                 ||:           :| |.:||.|   |::  .|..|:.|..|
Mouse   394 EEDSPAAKAFGNSTFTLQGLPLNCAPYPRRREPEV--RFQYPSGAEAG 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 36/38 (95%)
Irx6NP_071873.2 COG5576 <142..232 CDD:227863 64/89 (72%)
Homeobox_KN 161..200 CDD:283551 36/38 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..270 17/77 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 1 1.000 - - FOG0001669
OrthoInspector 1 1.000 - - mtm8793
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 1 1.000 - - X1407
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.910

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