DRSC/TRiP Functional Genomics Resources

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Protein Alignment mirr and PKNOX2

DIOPT Version :9

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001369252.1 Gene:PKNOX2 / 63876 HGNCID:16714 Length:472 Species:Homo sapiens


Alignment Length:478 Identity:84/478 - (17%)
Similarity:130/478 - (27%) Gaps:215/478 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 PGHSGMVTSTVPPGARSTSPCGPSAGLPALSLVGAPP---PGPHSSAPGGA---PAPGAGNPPNR 118
            |..:.|.|..|||        .|....|.::....||   ...|.|||..|   |.|.|...|..
Human     9 PALTMMATQNVPP--------PPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAPIDPQA 65

  Fly   119 CCDTG-RTIYTDPV----------------SGQTICSCQYDMLNYQRLAAAGGVPLGVYPEGMSA 166
            ..:.. |.:|..|:                ..:.|.|..:|:                   .:..
Human    66 QLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDV-------------------DIEN 111

  Fly   167 YLSGIAADQPPFYANPAGID----------------------------------LK-----ENLV 192
            ::.....:..||:::...:|                                  ||     :||:
Human   112 FVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLL 176

  Fly   193 AGASPWPY----PSM-YHPYDA------AFAGYPFNSYG-------------------------- 220
            ......||    ||: .|..|.      :.:|...|..|                          
Human   177 RNDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSGG 241

  Fly   221 ---------------------------------------MDLNGARRKN----ATRETTSTLKAW 242
                                                   :|....:.||    ..:..|:.:::|
Human   242 ALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSW 306

  Fly   243 LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL---------------KKENKMTWEP 292
            |.:|..:||||:.||..:|..|.:||.||:.||.|||||:               .|:.|....|
Human   307 LFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRP 371

  Fly   293 RNRV--------------------DDDDANIDD------DDDKNTEDNDLLDAKDSGVGSTDDKD 331
            ..|.                    .|...|:|:      |.........::.|.|..:..|:::|
Human   372 TQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQAMMAAHDDSLDGTEEED 436

  Fly   332 RSGRLGDMMTDRPGESNNSEWSE 354
            .     |.|.:...|....|..|
Human   437 E-----DEMEEEEEEELEEEVDE 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 20/38 (53%)
PKNOX2NP_001369252.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 18/60 (30%)
gliding_GltG 5..>77 CDD:411344 21/75 (28%)
Meis_PKNOX_N 96..181 CDD:406806 10/103 (10%)
Homeobox_KN 306..345 CDD:399131 20/38 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..371 2/19 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..405 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..472 9/38 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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