DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mirr and MEIS2

DIOPT Version :9

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_733775.1 Gene:MEIS2 / 4212 HGNCID:7001 Length:477 Species:Homo sapiens


Alignment Length:503 Identity:103/503 - (20%)
Similarity:150/503 - (29%) Gaps:210/503 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 GLPALSLVGAP------PP------GP--HSSAPGGAPAP-------GAGNPPNRCCDTGR-TIY 127
            |:|| |:.|.|      ||      ||  |::...||.||       ..|:..|......: .||
Human    18 GVPA-SMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNVMPASMGSAVNDALKRDKDAIY 81

  Fly   128 TDP-----------------------VSGQTICSCQYDMLNYQRLAAAGGVPLGVYPEGMSAYLS 169
            ..|                       |:|..:||.  |..|                |.::.:..
Human    82 GHPLFPLLALVFEKCELATCTPREPGVAGGDVCSS--DSFN----------------EDIAVFAK 128

  Fly   170 GIAADQPPFYANP-----------------------------------------AGIDLKENLVA 193
            .:.|::|.|.:||                                         ..|||..:...
Human   129 QVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERD 193

  Fly   194 GASPWPY--------------PSMYHPYDAA----FAGYPFNSYG-------------------- 220
            |:|...:              ||.:..:|.|    .||.|..|.|                    
Human   194 GSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNS 258

  Fly   221 -----------MDLNGARRKNA---TRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQV 271
                       .|.:..|:|..   .:..|:.::|||.:|..:|||::.:|..||..|.:|:.||
Human   259 VASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQV 323

  Fly   272 STWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGSTDDKDRSGRL 336
            :.||.|||||:                    :....|::.....|||...|...:...:.:.  :
Human   324 NNWFINARRRI--------------------VQPMIDQSNRAGFLLDPSVSQGAAYSPEGQP--M 366

  Fly   337 GDMMTD-------RPGESNNSEWSESRPGSPNGSPDLYDRPGSMPPGAHPLFHPAALHH------ 388
            |..:.|       ||....:........|.|.|..  ..:|...||...|  ||..|.|      
Human   367 GSFVLDGQQHMGIRPAGLQSMPGDYVSQGGPMGMS--MAQPSYTPPQMTP--HPTQLRHGPPMHS 427

  Fly   389 ----HFRPPA----GSPPDIAAYHHHQQQLLQQHQQAQQNSLQTAVGG 428
                |...||    |.||.      |....:........||:...|||
Human   428 YLPSHPHHPAMMMHGGPPT------HPGMTMSAQSPTMLNSVDPNVGG 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 18/38 (47%)
MEIS2NP_733775.1 Required for interaction with PBX1. /evidence=ECO:0000250 71..191 18/137 (13%)
Meis_PKNOX_N 110..194 CDD:406806 14/101 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..283 14/89 (16%)
Homeobox_KN 294..333 CDD:399131 18/38 (47%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:26550823, ECO:0000305|Ref.16 299..333 15/33 (45%)
PAT1 <335..>463 CDD:401645 28/139 (20%)
Transcriptional activation domain 340..477 32/142 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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