Protein Alignment mirr and hth

DIOPT Version :9

• Sequence 1: NP_001261778.1
• Gene: mirr / 39441
• FlyBaseID: FBgn0014343
• Length: 682
• Species: Drosophila melanogaster
• Sequence 2: NP_476576.1
• Gene: hth / 41273
• FlyBaseID: FBgn0001235
• Length: 487
• Species: Drosophila melanogaster
• Alignment Length: 362
• Identity: 82/362 - (22%)
• Similarity: 118/362 - (32%)
• Gaps: 139/362 - (38%)

  Fly    59 GPGHSGMVTSTVPPGARSTSPCGPSAGLPALSLVGAPPPGPHSSAPGGAPAPGAGNPPNRCCDTG 123
            |.|.|...:::...||.:.....||:   :||..||......|...|..|.|.:..||  ..||
  Fly   222 GEGRSNADSTSHTDGASTPDVRPPSS---SLSYGGAMNDDARSPGAGSTPGPLSQQPP--ALDT- 280

  Fly   124 RTIYTDPVSGQTICSCQYDMLNYQRLAAAGGVPLGVYPEGMSAYLSGIAADQPPFYANPA---GI 185
                :|| .|:.:.|.....|.|               :|......         :::||   ..
  Fly   281 ----SDP-DGKFLSSLNPSELTY---------------DGRWCRRE---------WSSPADARNA 316

  Fly   186 DLKENLVAGASPWPYPSMYHPYDAAFAGYPFNSYGMDLNG--------------------ARRKN 230
            |....|               |.:.|.|.|.| :|...:|                    :.:||
  Fly   317 DASRRL---------------YSSVFLGSPDN-FGTSASGDASNASIGSGEGTGEEDDDASGKKN 365

  Fly   231 ATRE------TTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-----LKK 284
            ..:.      .|:.|:|||.:|..:|||::.:|..||..|.:|:.||:.||.|||||     :.:
  Fly   366 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQ 430

  Fly   285 ENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGSTDDKDRSGRLGD----MMTDRPG 345
            .|:..:.|.                         ...||.|    .|..|.:.|    ||...||
  Fly   431 SNRAVYTPH-------------------------PGPSGYG----HDAMGYMMDSQAHMMHRPPG 466

  Fly   346 ESNNSEWSESRPGSPNGSPDLYDRPGSMPP----GAH 378
            :          ||...|.|       ..||    |.|
  Fly   467 D----------PGFHQGYP-------HYPPAEYYGQH 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mirr	NP_001261778.1	Homeobox_KN	242..281	CDD:283551	18/38 (47%)
hth	NP_476576.1	Meis_PKNOX_N	127..211	CDD:406806
		Homeobox_KN	383..422	CDD:399131	18/38 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0773
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900