DRSC/TRiP Functional Genomics Resources

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Protein Alignment mirr and irx5b

DIOPT Version :9

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001001405.1 Gene:irx5b / 405792 ZFINID:ZDB-GENE-040628-5 Length:371 Species:Danio rerio


Alignment Length:466 Identity:145/466 - (31%)
Similarity:187/466 - (40%) Gaps:158/466 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ALSLVGAPPPG------PHSSAPGGAPAPGAGNPPNRCCDTGRTIYTDPVSGQTICSCQYDMLNY 146
            :|||...||.|      |.:...|.:.:..|.:|......|..|:        ...|.||.    
Zfish    12 SLSLYSCPPYGSTGITAPRTDDLGRSSSGSAFSPYASTAFTNTTV--------AFSSLQYS---- 64

  Fly   147 QRLAAAGGVPLGVYPEGMSAYLSGIAADQPPFYANPAGIDLKENLVAGASPW-PYPSM-----YH 205
                          ||..:.:.|                       .|.||: |.|.|     ||
Zfish    65 --------------PESAAPFTS-----------------------YGGSPYDPSPGMTGSIGYH 92

  Fly   206 PYDAAFAGYPFNSYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQ 270
            ||......|||.      :.|.||||||:.|:|||||||||:|||||||||||||||||||||||
Zfish    93 PYAGPLGPYPFG------DPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQ 151

  Fly   271 VSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLL----DAKDSGVGSTDDKD 331
            ||||||||||||||||||||.||.|.:|:|.....|.:||.||::.:    ..|||...:.|..|
Zfish   152 VSTWFANARRRLKKENKMTWTPRTRSEDEDEEDSIDLEKNDEDDEPMKTAESTKDSETRAEDHDD 216

  Fly   332 RS-------GRLGDMMTDRPGESNNS---EWSES--RPGSPNGSPDLYDRPGSMPPGAHPLFHPA 384
            .:       |...:..|:.|..:.:|   |.|||  :|.|.|      .:|.|:.|..:|     
Zfish   217 STDSVIIDCGEEEENRTESPVPTTSSPQDELSESTIKPLSGN------CKPTSVIPSPNP----- 270

  Fly   385 ALHHHFRPPAGSPPDIAAYHHHQQQLLQQHQQAQQNSLQTAVGGTAKPRIWSLADMASKDS--KD 447
                                                          ||::||||::|:.|.  ::
Zfish   271 ----------------------------------------------KPKLWSLAEIATSDKGREE 289

  Fly   448 SSSGAKDNHPELP-PAHPGFYGHPGQQPSPGKILSPLAARIPNYSPYVRPDLYRGFYGPAAAHLG 511
            .|..::...|:.. ||...:|.            ||......||..:..   ..|..|..:.||.
Zfish   290 VSHTSRAGSPQCTFPARHLYYA------------SPFFVGFSNYGAFGH---LNGCGGGNSTHLN 339

  Fly   512 APTQEFLEHQR 522
            ...|..|...|
Zfish   340 GINQAVLHRTR 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 37/38 (97%)
irx5bNP_001001405.1 Homeobox_KN 123..162 CDD:283551 37/38 (97%)
IRO 267..284 CDD:214716 8/67 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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