DRSC/TRiP Functional Genomics Resources

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Protein Alignment mirr and tgif1

DIOPT Version :10

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_955861.1 Gene:tgif1 / 321756 ZFINID:ZDB-GENE-030131-475 Length:273 Species:Danio rerio


Alignment Length:287 Identity:71/287 - (24%)
Similarity:105/287 - (36%) Gaps:72/287 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 VAGASPWPYPSMYHPYDAAFAGYPFNSYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGE 256
            ::|:......|:..|.|.:..|      |:.....||.|..:|:...|:.||.:|:.|.||::.|
Zfish    10 MSGSETEDEDSLDVPLDLSSNG------GVSGKRKRRGNLPKESVQILRDWLYQHRYNAYPSEQE 68

  Fly   257 KIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKD 321
            |.:|:..|.::..||..||.||||||..|       ..|.|..|.|......:.::..::|    
Zfish    69 KALLSKQTHLSTLQVCNWFINARRRLLPE-------MLRKDGKDPNQFTISRRGSKGGEML---- 122

  Fly   322 SGVGSTDDKDRSGRLGDMMTDRPGESNNSEWSESRPGSP---------NGSPDLYDRPGSMPPGA 377
                  .|..:|.:.|.:..   ||..||    ..||||         ||.|.....| ..||..
Zfish   123 ------SDNSQSPKHGLLAN---GEDRNS----YEPGSPHPTSNTPTSNGYPKKALSP-KTPPSP 173

  Fly   378 HPLF-HPAALHHHFRPPAGSPPDIAAYHHHQQQLLQQHQQAQQNSLQTAV-GGTAKPRIWSLADM 440
            .|:. .|:.:.|                    ..:....|....:.:..| |.|..|    |.|.
Zfish   174 GPVLPRPSVICH--------------------TTITTATQGINTTTRLGVEGATELP----LTDA 214

  Fly   441 AS------KDSKDSSSGAKDNHPELPP 461
            ||      :.:....||..:..|..||
Zfish   215 ASLFGCRGEGNVSPQSGLFNTPPPTPP 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 243..281 CDD:428673 16/37 (43%)
tgif1NP_955861.1 Homeobox_KN 55..93 CDD:428673 16/37 (43%)

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