Protein Alignment mirr and Irx3

DIOPT Version :9

• Sequence 1: NP_001261778.1
• Gene: mirr / 39441
• FlyBaseID: FBgn0014343
• Length: 682
• Species: Drosophila melanogaster
• Sequence 2: XP_006255254.1
• Gene: Irx3 / 307721
• RGDID: 1307424
• Length: 522
• Species: Rattus norvegicus
• Alignment Length: 567
• Identity: 178/567 - (31%)
• Similarity: 235/567 - (41%)
• Gaps: 174/567 - (30%)

  Fly    96 PP----GPHSSAPGGAPAPGAGNPPNRCCDTG------RTIYTDPVSGQTICSCQYDMLNYQRLA 150
            ||    |...|:.||...||||  .:....:|      .::|..|               |...|
  Rat    20 PPAAGGGGGGSSAGGRSGPGAG--ASELAASGSLSNVLSSVYGAP---------------YAAAA 67

  Fly   151 AAGGVPLGVYPEGMSAYLSGIAADQPPFYANPAGIDLKEN------LVAGASPWPYPSMYHPYDA 209
            ||...     .:|..|:|. .|.:.|.|....|..:||::      ..|.|.|.|:|:.| ||..
  Rat    68 AAAAA-----AQGYGAFLP-YATELPIFPQLGAQYELKDSPGVQHPATAAAFPHPHPAFY-PYGQ 125

  Fly   210 AFAGYPFNSYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTW 274
            ...|.|          :|.||||||:|||||||||||:|||||||||||||||||||||||||||
  Rat   126 YQFGDP----------SRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 180

  Fly   275 FANARRRLKKENKMTWEPRNRVD-----------DDDANIDDDDDK---NTEDNDLLDAKDSGVG 325
            ||||||||||||||||.||:|.|           ::|...|:::.|   ..|:.:|...::...|
  Rat   181 FANARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEEGKRELEMEEEELAGEEEDTGG 245

  Fly   326 ---STDDKDR--------SGRLGDMMT-----DRPGESNNSEWSESR-PGSPNGSPDLYDRPGSM 373
               :.||:|.        |...|..:|     .|.|:......|:.: ..|.:.|..|.:||.|:
  Rat   246 EGLADDDEDEEIDLENLDSAAAGSELTLAGTAHRNGDFGLGPISDCKNSDSDDSSESLEERPLSV 310

  Fly   374 -------PPGAHPLFHPAALHHHFRPPAGSPPDIAAYHHHQQQLLQQHQQAQQNSLQTAVGGTAK 431
                   ||.|.....|.:      ||:|..|...|             .|..::||       |
  Rat   311 LSLAPAPPPVARAPASPPS------PPSGLDPCAPA-------------PAPSSTLQ-------K 349

  Fly   432 PRIWSLADMASKDSKDSSSGAKDNHPELPPAHPGFYGHPGQQPSPGKILSPLAARIPNYSPYVRP 496
            |:|||||:.|:         :.|| |...|  ||..|.|     ||..::|...::
  Rat   350 PKIWSLAETAT---------SPDN-PRRSP--PGAGGSP-----PGAAVAPPTLQL--------- 388

  Fly   497 DLYRGFYGPAAAHLGAPTQEFLEHQRTFGASLAAH---NGPLGMNPLLWKAAVSGAANGHHFAPL 558
                   .||||                .|:.|||   :.|||..|........|...|....||
  Rat   389 -------SPAAA----------------AAAAAAHRLVSAPLGKFPAWTNRPFPGPPAGPRPHPL 430

  Fly   559 SLTTSG--------GSSGGQQVAPPPVASPSASSSSSSMGCDVVHIP 597
            |:..|.        |::|....|....|.|:...|.:....::..:|
  Rat   431 SMLGSAPQHLLGLPGAAGHPAAAAAAYARPAEPESGTGDKKNIAVVP 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mirr	NP_001261778.1	Homeobox_KN	242..281	CDD:283551	37/38 (97%)
Irx3	XP_006255254.1	Homeobox_KN	148..187	CDD:283551	37/38 (97%)
		IRO	345..362	CDD:214716	10/32 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D351833at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.010