DRSC/TRiP Functional Genomics Resources

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Protein Alignment mirr and Tgif2

DIOPT Version :9

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_775572.1 Gene:Tgif2 / 228839 MGIID:1915299 Length:237 Species:Mus musculus


Alignment Length:197 Identity:53/197 - (26%)
Similarity:76/197 - (38%) Gaps:54/197 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 MDLNGARRK--NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 283
            :.|.|.|::  |..:|:...|:.||..|:.|.||::.||:.|:..|.:::.|:..||.||||||.
Mouse    13 LSLTGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRLL 77

  Fly   284 KENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLL--DAKDSGVGSTDDKDRSGRLGDMMTDRPGE 346
            .                              |:|  |.||....:.  ..|.|:..|:..  |..
Mouse    78 P------------------------------DMLRKDGKDPNQFTI--SRRGGKASDVAL--PRG 108

  Fly   347 SNNSEWSESRPGSPN------GSPDLYDRPGSMPPGAHP---------LFHPAA-LHHHFRPPAG 395
            |:.|..:.|.|...|      .|..|:...|..|....|         |..||: |....|..||
Mouse   109 SSPSLLAVSVPAPTNMLSLSVCSMPLHSGQGEKPAAPFPQVELESPKALVTPASTLTLLTRAEAG 173

  Fly   396 SP 397
            ||
Mouse   174 SP 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 16/38 (42%)
Tgif2NP_775572.1 Homeobox_KN 36..75 CDD:368670 16/38 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..106 4/22 (18%)
Repressive function 103..237 20/75 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..196 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..237
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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