DRSC/TRiP Functional Genomics Resources

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Protein Alignment mirr and meis1b

DIOPT Version :10

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_073775304.1 Gene:meis1b / 170446 ZFINID:ZDB-GENE-020122-1 Length:463 Species:Danio rerio


Alignment Length:481 Identity:96/481 - (19%)
Similarity:144/481 - (29%) Gaps:194/481 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 HSGM----VTSTV---PPGARSTSPCGPSAGLPALSLVGAPP----PGPHSSAPGGAPAPGAGNP 115
            |.||    :.||:   |..|||         :.|:.|...|.    ..||::.....| |..|:.
Zfish    10 HYGMDGVGIPSTMYGDPHAARS---------MQAVHLNHGPQLHSHQYPHTAHTNAMP-PSMGSS 64

  Fly   116 PNRCCDTGR-TIYTDP-----------------------VSGQTICSCQYDMLNYQRLAAAGGVP 156
            .|......: :||..|                       |:|..:||.:                
Zfish    65 VNDALKRDKDSIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSE---------------- 113

  Fly   157 LGVYPEGMSAYLSGIAADQPPFYANP--------------------------------------- 182
              .:.|.::.:...|.|::|.|.:||                                       
Zfish   114 --SFNEDIAVFAKQIRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLK 176

  Fly   183 --AGIDL------------KENLVAGASPWPYPSMYHPYD----AAFAGYPFNSYG--------- 220
              ..|||            .|.:...:.|....|....:|    ....|.|..|.|         
Zfish   177 GKMPIDLVIDDREGGSKSDSEEITRSSGPLDQTSWNRDHDDTASTRSGGTPGPSSGGHTSHSGDN 241

  Fly   221 --------------------MDLNGARRKNATR-----ETTSTLKAWLNEHKKNPYPTKGEKIML 260
                                .|.:..:::|..|     ..|:.::|||.:|..:|||::.:|..|
Zfish   242 SSEQGDGLDNSVASPSTGDDDDPDKEKKRNKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQL 306

  Fly   261 AIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVG 325
            |..|.:|:.||:.||.|||||:.:.         .:|..:..:......|.      |.:..|..
Zfish   307 AQDTGLTILQVNNWFINARRRIVQP---------MIDQSNRAVSQGAPYNP------DGQPMGGF 356

  Fly   326 STDDKDRSGRLGDMMTDRPGESNNSEWSESRP-----GSPNGSPDLYDRPGSMPPGAHPLFHPAA 385
            ..|.:...|.....:...||:    ..|.|.|     |.|..|      ...||      .|||.
Zfish   357 VMDGQQHMGIRPPGLQSMPGD----YLSHSGPVAMAMGQPGYS------ASQMP------HHPAQ 405

  Fly   386 LHHHFRPPAGSPPDIAAYHHHQQQLL 411
            |.|  .||..|  .|..:.||...|:
Zfish   406 LRH--GPPMRS--YIPGHLHHPAMLM 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 243..281 CDD:428673 17/37 (46%)
meis1bXP_073775304.1 None

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